ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro... 44 0.31
2emb|AL513284.12| Human DNA sequence from clone RP11-518D3 on chr... 44 0.31
3emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chr... 44 0.31
4emb|AL049767.12|HSJ172H20 Human DNA sequence from clone RP1-172H... 44 0.31
5gb|BC094733.1| Homo sapiens cDNA clone IMAGE:30337465, partial cds 44 0.31
6emb|Z47556.1|HSSG1SG2 H.sapiens genes for semenogelin I and seme... 44 0.31
7gb|AE010232.1| Pyrococcus furiosus DSM 3638, section 107 of 173 ... 44 0.31
8gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome... 42 1.2
9gb|AC112945.9| Mus musculus chromosome 15, clone RP23-382O21, co... 42 1.2
10ref|XM_423160.1| PREDICTED: Gallus gallus similar to 1-phosphati... 42 1.2
11gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chrom... 42 1.2
12gb|AY190953.1| Drosophila virilis clone DVIF01_19_E15 (D1419) ge... 42 1.2
13gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromo... 42 1.2
14gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, co... 42 1.2
15emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on ch... 42 1.2
16gb|BT009984.1| Drosophila melanogaster RE52350 full insert cDNA 42 1.2
17emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in... 42 1.2
18gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswel... 42 1.2
19ref|NM_140568.1| Drosophila melanogaster CG5830-RA (CG5830), mRNA 42 1.2
20gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, comple... 42 1.2
21emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 i... 42 1.2
22gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56... 42 1.2
23gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, com... 42 1.2
24gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, co... 42 1.2
25gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, compl... 42 1.2
26gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 40 4.9
27gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2,... 40 4.9
28gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, com... 40 4.9
29gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's H... 40 4.9
30gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, co... 40 4.9
31gb|AC132581.4| Mus musculus BAC clone RP24-390D8 from chromosome... 40 4.9
32gb|AC099621.12| Mus musculus chromosome 15, clone RP23-468J2, co... 40 4.9
33gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome ... 40 4.9
34gb|AC125144.3| Mus musculus BAC clone RP24-346C2 from chromosome... 40 4.9
35ref|XM_725206.1| Plasmodium yoelii yoelii str. 17XNL 2-oxoglutar... 40 4.9
36gb|AY490250.1| Lycopersicon esculentum CONSTANS 1 (CO1) gene, co... 40 4.9
37ref|XM_674029.1| Plasmodium berghei strain ANKA 2-oxoglutarate d... 40 4.9
38emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on ch... 40 4.9
39gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chrom... 40 4.9
40gb|AC104704.1| Drosophila melanogaster 3L BAC RP98-8H6 (Roswell ... 40 4.9
41dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 40 4.9
42gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complet... 40 4.9
43gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, comp... 40 4.9
44gb|AC151285.2| Mus musculus BAC clone RP23-426D6 from chromosome... 40 4.9
45emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chr... 40 4.9
46emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chro... 40 4.9
47gb|AC103953.8| Homo sapiens chromosome 8, clone CTD-2571K21, com... 40 4.9
48gb|AC154417.2| Mus musculus BAC clone RP23-169H21 from 13, compl... 40 4.9
49gb|AE003527.3| Drosophila melanogaster chromosome 3L, section 58... 40 4.9
50dbj|AP001001.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.9
51emb|CT030648.7| Mouse DNA sequence from clone RP24-440M15 on chr... 40 4.9
52dbj|AP006091.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 4.9
53emb|AL365201.14| Human DNA sequence from clone RP11-39C22 on chr... 40 4.9
54gb|AY951688.1| Daldinia bambusicola voucher YMJ 107 beta-tubulin... 40 4.9 
>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 236    ctacgaaaaagaaaagagaaaa 257
              ||||||||||||||||||||||
Sbjct: 102458 ctacgaaaaagaaaagagaaaa 102479
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>emb|AL513284.12| Human DNA sequence from clone RP11-518D3 on chromosome 1 Contains the
             3' end of a novel gene (FLJ42034, FLJ38762), the gene for
             a putative NFkB activating protein 373, a C-terminal
             binding protein 2 (CTBP2) pseudogene, a ribosomal protein
             S7 (RPS7) pseudogene and a CpG island, complete sequence
          Length = 169972

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 242   aaaagaaaagagaaaactaaac 263
             ||||||||||||||||||||||
Sbjct: 66863 aaaagaaaagagaaaactaaac 66884
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>emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chromosome 1p36.21-36.33
             Contains the SLC2A5 gene for solute carrier family 2
             (facilitated glucose/fructose transporter) member 5, two
             novel genes and two CpG islands, complete sequence
          Length = 139111

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 241   aaaaagaaaagagaaaactaaa 262
             ||||||||||||||||||||||
Sbjct: 23316 aaaaagaaaagagaaaactaaa 23295
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>emb|AL049767.12|HSJ172H20 Human DNA sequence from clone RP1-172H20 on chromosome 20q12-13.12
             Contains the PI3 gene for skin-derived protease inhibitor
             3 (SKALP)the SEMG1 gene for semenogelin I, the SEMG2 gene
             for semenogelin II, complete sequence
          Length = 99747

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 240   gaaaaagaaaagagaaaactaa 261
             ||||||||||||||||||||||
Sbjct: 75316 gaaaaagaaaagagaaaactaa 75295
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>gb|BC094733.1| Homo sapiens cDNA clone IMAGE:30337465, partial cds
          Length = 2778

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 241  aaaaagaaaagagaaaactaaa 262
            ||||||||||||||||||||||
Sbjct: 2058 aaaaagaaaagagaaaactaaa 2037
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>emb|Z47556.1|HSSG1SG2 H.sapiens genes for semenogelin I and semenogelin II
          Length = 28069

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 240 gaaaaagaaaagagaaaactaa 261
           ||||||||||||||||||||||
Sbjct: 745 gaaaaagaaaagagaaaactaa 724
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>gb|AE010232.1| Pyrococcus furiosus DSM 3638, section 107 of 173 of the complete
            genome
          Length = 13800

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 241  aaaaagaaaagagaaaactaaa 262
            ||||||||||||||||||||||
Sbjct: 5460 aaaaagaaaagagaaaactaaa 5439
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>gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome 18, complete sequence
          Length = 216368

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    aaaaagaaaagagaaaactaa 261
              |||||||||||||||||||||
Sbjct: 119463 aaaaagaaaagagaaaactaa 119443
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>gb|AC112945.9| Mus musculus chromosome 15, clone RP23-382O21, complete sequence
          Length = 189335

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 140    caactacacaaaatattgggatgca 164
              ||||||||||||||||| |||||||
Sbjct: 168037 caactacacaaaatattaggatgca 168013
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>ref|XM_423160.1| PREDICTED: Gallus gallus similar to
           1-phosphatidylinositol-4,5-bisphosphate
           phosphodiesterase gamma 2 (Phosphoinositide
           phospholipase C) (PLC-gamma-2) (Phospholipase C-gamma-2)
           (PLC-IV) (LOC425395), partial mRNA
          Length = 983

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 243 aaagaaaagagaaaactaaac 263
           |||||||||||||||||||||
Sbjct: 804 aaagaaaagagaaaactaaac 784
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>gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chromosome 9, complete
             sequence
          Length = 161307

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   gaaaaagaaaagagaaaacta 260
             |||||||||||||||||||||
Sbjct: 49494 gaaaaagaaaagagaaaacta 49474
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>gb|AY190953.1| Drosophila virilis clone DVIF01_19_E15 (D1419) genomic sequence
          Length = 43320

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 2     acacacacaataactatgcataatt 26
             |||||||||||||| ||||||||||
Sbjct: 11491 acacacacaataacaatgcataatt 11515
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>gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromosome 9, complete
             sequence
          Length = 165959

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   gaaaaagaaaagagaaaacta 260
             |||||||||||||||||||||
Sbjct: 61332 gaaaaagaaaagagaaaacta 61312
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>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence
          Length = 202155

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 140   caactacacaaaatattgggatgca 164
             ||||||||||||||||| |||||||
Sbjct: 40790 caactacacaaaatattaggatgca 40766
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>emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A) and a CpG island, complete sequence
          Length = 161380

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   gaaaaagaaaagagaaaacta 260
             |||||||||||||||||||||
Sbjct: 41714 gaaaaagaaaagagaaaacta 41734
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>gb|BT009984.1| Drosophila melanogaster RE52350 full insert cDNA
          Length = 3548

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 242  aaaagaaaagagaaaactaaa 262
            |||||||||||||||||||||
Sbjct: 2082 aaaagaaaagagaaaactaaa 2102
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>emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in linkage group 24,
              complete sequence
          Length = 209735

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     atgccaaatatgctatatatt 101
              |||||||||||||||||||||
Sbjct: 109440 atgccaaatatgctatatatt 109460
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>gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 169209

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 242   aaaagaaaagagaaaactaaa 262
             |||||||||||||||||||||
Sbjct: 89832 aaaagaaaagagaaaactaaa 89812
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>ref|NM_140568.1| Drosophila melanogaster CG5830-RA (CG5830), mRNA
          Length = 3549

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 242  aaaagaaaagagaaaactaaa 262
            |||||||||||||||||||||
Sbjct: 2082 aaaagaaaagagaaaactaaa 2102
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>gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, complete sequence
          Length = 93879

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   gaaaaagaaaagagaaaacta 260
             |||||||||||||||||||||
Sbjct: 39149 gaaaaagaaaagagaaaacta 39169
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>emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 in linkage group 24,
              complete sequence
          Length = 164521

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     atgccaaatatgctatatatt 101
              |||||||||||||||||||||
Sbjct: 143574 atgccaaatatgctatatatt 143594
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>gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56 of 83 of the complete
              sequence
          Length = 252201

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    aaaagaaaagagaaaactaaa 262
              |||||||||||||||||||||
Sbjct: 225817 aaaagaaaagagaaaactaaa 225797
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>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence
          Length = 201379

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    gaaaaagaaaagagaaaacta 260
              |||||||||||||||||||||
Sbjct: 180319 gaaaaagaaaagagaaaacta 180339
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>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence
          Length = 192344

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   gaaaaagaaaagagaaaacta 260
             |||||||||||||||||||||
Sbjct: 55933 gaaaaagaaaagagaaaacta 55953
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>gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, complete sequence
          Length = 191505

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    aaaaagaaaagagaaaactaa 261
              |||||||||||||||||||||
Sbjct: 177954 aaaaagaaaagagaaaactaa 177934
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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     acgaaaaagaaaagagaaaa 257
               ||||||||||||||||||||
Sbjct: 1673002 acgaaaaagaaaagagaaaa 1672983
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>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence
          Length = 134290

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   acgaaaaagaaaagagaaaa 257
             ||||||||||||||||||||
Sbjct: 89309 acgaaaaagaaaagagaaaa 89290
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>gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, complete sequence
          Length = 227074

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    aaagaaaagagaaaactaaa 262
              ||||||||||||||||||||
Sbjct: 198664 aaagaaaagagaaaactaaa 198645
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>gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 209654

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    aaaagaaaagagaaaactaa 261
              ||||||||||||||||||||
Sbjct: 202814 aaaagaaaagagaaaactaa 202833
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>gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, complete sequence
          Length = 160759

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    aaagaaaagagaaaactaaa 262
              ||||||||||||||||||||
Sbjct: 106331 aaagaaaagagaaaactaaa 106350
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>gb|AC132581.4| Mus musculus BAC clone RP24-390D8 from chromosome 6, complete sequence
          Length = 172240

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    aaaaagaaaagagaaaacta 260
              ||||||||||||||||||||
Sbjct: 131897 aaaaagaaaagagaaaacta 131916
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>gb|AC099621.12| Mus musculus chromosome 15, clone RP23-468J2, complete sequence
          Length = 178810

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   acgaaaaagaaaagagaaaa 257
             ||||||||||||||||||||
Sbjct: 81231 acgaaaaagaaaagagaaaa 81212
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>gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome 15, complete sequence
          Length = 198019

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    acgaaaaagaaaagagaaaa 257
              ||||||||||||||||||||
Sbjct: 170169 acgaaaaagaaaagagaaaa 170188
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>gb|AC125144.3| Mus musculus BAC clone RP24-346C2 from chromosome 6, complete sequence
          Length = 171156

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   aaaaagaaaagagaaaacta 260
             ||||||||||||||||||||
Sbjct: 28709 aaaaagaaaagagaaaacta 28728
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>ref|XM_725206.1| Plasmodium yoelii yoelii str. 17XNL 2-oxoglutarate dehydrogenase, E1
            component (PY02421) partial mRNA
          Length = 3117

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaattatacaacaacataa 229
            ||||||||||||||||||||
Sbjct: 2443 aaaattatacaacaacataa 2462
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>gb|AY490250.1| Lycopersicon esculentum CONSTANS 1 (CO1) gene, complete cds
          Length = 4734

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  aaagaaaagagaaaactaaa 262
            ||||||||||||||||||||
Sbjct: 1591 aaagaaaagagaaaactaaa 1610
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>ref|XM_674029.1| Plasmodium berghei strain ANKA 2-oxoglutarate dehydrogenase e1
            component, mitochondrial precursor (PB001367.02.0)
            partial mRNA
          Length = 3117

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaattatacaacaacataa 229
            ||||||||||||||||||||
Sbjct: 2443 aaaattatacaacaacataa 2462
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>emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on chromosome 13 Contains a
              novel heterogeneous nuclear ribonucleoprotein family A
              protein and a novel gene, complete sequence
          Length = 168897

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    ccaactacacaaaatattgg 158
              ||||||||||||||||||||
Sbjct: 153718 ccaactacacaaaatattgg 153737
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>gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chromosome 4, complete
              sequence
          Length = 191017

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gaaaaagaaaagagaaaact 259
              ||||||||||||||||||||
Sbjct: 137587 gaaaaagaaaagagaaaact 137606
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>gb|AC104704.1| Drosophila melanogaster 3L BAC RP98-8H6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 169705

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   acgaaaaagaaaagagaaaa 257
             ||||||||||||||||||||
Sbjct: 21886 acgaaaaagaaaagagaaaa 21867
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>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     acgaaaaagaaaagagaaaa 257
               ||||||||||||||||||||
Sbjct: 1591237 acgaaaaagaaaagagaaaa 1591218
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>gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complete sequence
          Length = 119491

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gaaaaagaaaagagaaaact 259
              ||||||||||||||||||||
Sbjct: 100352 gaaaaagaaaagagaaaact 100371
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>gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     acacacaataactatgcata 23
             ||||||||||||||||||||
Sbjct: 94887 acacacaataactatgcata 94906
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>gb|AC151285.2| Mus musculus BAC clone RP23-426D6 from chromosome 17, complete
            sequence
          Length = 225650

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 240  gaaaaagaaaagagaaaactaaac 263
            ||||||||||||||||||| ||||
Sbjct: 2425 gaaaaagaaaagagaaaacaaaac 2448
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>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete
            sequence
          Length = 278310

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  gaaaaagaaaagagaaaact 259
            ||||||||||||||||||||
Sbjct: 1125 gaaaaagaaaagagaaaact 1144
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>emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chromosome 21, complete
             sequence
          Length = 178865

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   gaaaaagaaaagagaaaact 259
             ||||||||||||||||||||
Sbjct: 45823 gaaaaagaaaagagaaaact 45804
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>gb|AC103953.8| Homo sapiens chromosome 8, clone CTD-2571K21, complete sequence
          Length = 216373

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 240    gaaaaagaaaagagaaaactaaac 263
              ||||||||||||| ||||||||||
Sbjct: 112579 gaaaaagaaaagaaaaaactaaac 112602
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>gb|AC154417.2| Mus musculus BAC clone RP23-169H21 from 13, complete sequence
          Length = 233984

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    aaagaaaagagaaaactaaa 262
              ||||||||||||||||||||
Sbjct: 198724 aaagaaaagagaaaactaaa 198705
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>gb|AE003527.3| Drosophila melanogaster chromosome 3L, section 58 of 83 of the complete
              sequence
          Length = 279904

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    acgaaaaagaaaagagaaaa 257
              ||||||||||||||||||||
Sbjct: 139652 acgaaaaagaaaagagaaaa 139633
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>dbj|AP001001.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-677I18, complete
              sequence
          Length = 182429

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    ttagtttctccaaactttgtaata 299
              |||||||||||||| |||||||||
Sbjct: 139671 ttagtttctccaaaatttgtaata 139694
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>emb|CT030648.7| Mouse DNA sequence from clone RP24-440M15 on chromosome 17, complete
             sequence
          Length = 206631

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 240   gaaaaagaaaagagaaaactaaac 263
             ||||||||||||||||||| ||||
Sbjct: 54427 gaaaaagaaaagagaaaacaaaac 54404
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>dbj|AP006091.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21D16, TM0157a,
             complete sequence
          Length = 72616

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 240   gaaaaagaaaagagaaaactaaac 263
             ||||||||||||||||||| ||||
Sbjct: 14027 gaaaaagaaaagagaaaacaaaac 14004
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>emb|AL365201.14| Human DNA sequence from clone RP11-39C22 on chromosome 9, complete
              sequence
          Length = 114026

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gaaaaagaaaagagaaaact 259
              ||||||||||||||||||||
Sbjct: 104973 gaaaaagaaaagagaaaact 104992
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>gb|AY951688.1| Daldinia bambusicola voucher YMJ 107 beta-tubulin gene, partial
           sequence
          Length = 1577

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 204 catgtcaaaattatacaacaacat 227
           |||||||||||||||| |||||||
Sbjct: 174 catgtcaaaattatacgacaacat 197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,447,197
Number of Sequences: 3902068
Number of extensions: 4447197
Number of successful extensions: 111822
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111668
Number of HSP's gapped (non-prelim): 154
length of query: 366
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 344
effective length of database: 17,147,199,772
effective search space: 5898636721568
effective search space used: 5898636721568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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