ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl19g06 |
|---|---|
| Clone Library Name | barley_pub |
>SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 807 Score = 98.2 bits (243), Expect = 4e-21 Identities = 47/48 (97%), Positives = 48/48 (100%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESN 267 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGES+ Sbjct: 758 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 805
>SUS1_ORYSA (P30298) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 808 Score = 95.9 bits (237), Expect = 2e-20 Identities = 45/47 (95%), Positives = 47/47 (100%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGES 270 TLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+AVPLAVDGES Sbjct: 759 TLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVDGES 805
>SUS2_TULGE (Q41607) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 820 Score = 88.2 bits (217), Expect = 4e-18 Identities = 40/47 (85%), Positives = 45/47 (95%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGES 270 TL GVYGFWKYVSNL+RRET+RYLEMFYALKYR+LA +VPLAVDGE+ Sbjct: 763 TLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVDGEA 809
>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 87.8 bits (216), Expect = 5e-18 Identities = 40/46 (86%), Positives = 44/46 (95%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGE 273 TLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE Sbjct: 767 TLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGE 812
>SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 87.8 bits (216), Expect = 5e-18 Identities = 40/46 (86%), Positives = 44/46 (95%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGE 273 TLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE Sbjct: 767 TLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGE 812
>SUS2_HORVU (P31923) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 86.7 bits (213), Expect = 1e-17 Identities = 39/48 (81%), Positives = 45/48 (93%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESN 267 TL+GVYGFWKYVSNL+RRETRRYLEM YALKYR +AA VPLAV+GE++ Sbjct: 767 TLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVEGETS 814
>SUS1_MAIZE (P04712) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) (Shrunken-1) Length = 802 Score = 85.1 bits (209), Expect = 4e-17 Identities = 39/44 (88%), Positives = 42/44 (95%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+ VPL+ D Sbjct: 759 TLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802
>SUS1_TULGE (Q41608) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 805 Score = 84.3 bits (207), Expect = 6e-17 Identities = 38/44 (86%), Positives = 42/44 (95%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TL GVYGFWKYVSNL+RRETRRYLEMFYALKYR+LA +VPLA+D Sbjct: 761 TLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804
>SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 3) Length = 816 Score = 83.6 bits (205), Expect = 1e-16 Identities = 36/48 (75%), Positives = 44/48 (91%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESN 267 TL+GVYGFWKYV+NL+RRETRRYLEM YALKYR +A VPLA++GE++ Sbjct: 767 TLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIEGEAS 814
>SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 81.3 bits (199), Expect = 5e-16 Identities = 37/44 (84%), Positives = 42/44 (95%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 762 TLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805
>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Nodulin-100) Length = 805 Score = 79.7 bits (195), Expect = 1e-15 Identities = 36/44 (81%), Positives = 41/44 (93%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLA + Sbjct: 762 TLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805
>SUSY_BETVU (Q42652) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Fragment) Length = 766 Score = 79.0 bits (193), Expect = 3e-15 Identities = 37/46 (80%), Positives = 39/46 (84%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGE 273 TL GVYGFWKYVS LERRETRRYLEMFY LK+R LA +VPLA D E Sbjct: 708 TLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEE 753
>SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 78.6 bits (192), Expect = 3e-15 Identities = 36/44 (81%), Positives = 41/44 (93%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 762 TLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
>SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 78.6 bits (192), Expect = 3e-15 Identities = 36/44 (81%), Positives = 41/44 (93%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 762 TLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
>SUS2_ARATH (Q00917) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 73.9 bits (180), Expect = 8e-14 Identities = 33/44 (75%), Positives = 38/44 (86%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TL GVY FWK+VS LERRETRRYLEMFY+LK+R LA ++PLA D Sbjct: 760 TLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803
>SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) (Susy*Dc1) Length = 808 Score = 72.8 bits (177), Expect = 2e-13 Identities = 34/44 (77%), Positives = 37/44 (84%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TL GVYGFWK+VS L+R E RRYLEMFYALKYR LA +VPLA D Sbjct: 764 TLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKD 807
>SUS2_PEA (O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 809 Score = 72.4 bits (176), Expect = 2e-13 Identities = 33/42 (78%), Positives = 36/42 (85%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLA 285 TL GVY FWKYVS LERRETRRYLEMFY LK+R LA +VP+A Sbjct: 766 TLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807
>SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 803 Score = 72.0 bits (175), Expect = 3e-13 Identities = 33/44 (75%), Positives = 39/44 (88%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TLTGV FWK+VSNL+R E+RRY+EMFYALKYR LA +VPLAV+ Sbjct: 760 TLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803
>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 72.0 bits (175), Expect = 3e-13 Identities = 36/44 (81%), Positives = 38/44 (86%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TLTGVYGFWK+VSNL+R E RRYLEMFYALKYR L AVPLA D Sbjct: 764 TLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPL--AVPLAQD 805
>SUS2_DAUCA (O49845) Sucrose synthase isoform II (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) (Susy*Dc2) Length = 801 Score = 70.9 bits (172), Expect = 7e-13 Identities = 34/44 (77%), Positives = 38/44 (86%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TL GVYGFWK+VS L+R E RRYLEMF ALKYR+LA +VPLAVD Sbjct: 758 TLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801
>SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 70.1 bits (170), Expect = 1e-12 Identities = 32/44 (72%), Positives = 36/44 (81%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TL VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA + Sbjct: 762 TLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS16) Length = 805 Score = 70.1 bits (170), Expect = 1e-12 Identities = 32/44 (72%), Positives = 36/44 (81%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TL VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA + Sbjct: 762 TLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
>SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS65) Length = 805 Score = 68.9 bits (167), Expect = 3e-12 Identities = 32/44 (72%), Positives = 36/44 (81%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 279 TL VYGFWK+VS L+R E RRYLEMFYALK+R LA VPLAV+ Sbjct: 762 TLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805
>SUSY_SACOF (P31925) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Fragment) Length = 218 Score = 51.6 bits (122), Expect = 4e-07 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKY 315 TLTG YGFW YVS LER +T RY++MFYAL+Y Sbjct: 187 TLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217
>HSCC_ECOLI (P77319) Chaperone protein hscC (Hsc62)| Length = 556 Score = 31.6 bits (70), Expect = 0.47 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = -1 Query: 195 YDLSTVVFIWSVCRGVCDLMSRHIREVLGSAACWFMPAASNKRLPVVFIFHQRVQCNVSL 16 YD ST+V + + + C L S I EV+ + C + R V IF ++ N ++ Sbjct: 328 YDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTV 387 Query: 15 SVS 7 VS Sbjct: 388 PVS 390
>FCR1_CANAL (O93870) Fluconazole resistance protein 1| Length = 517 Score = 30.8 bits (68), Expect = 0.80 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +1 Query: 10 DRQRNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVP-------RHQIAHPTTDRP 168 D RN+ +S + EH G+AFI P +S Q T+ P + ++ P++D Sbjct: 175 DPNRNLKSSSRLFAEHKGEAFI----GSPVTSPQQMPTSNPFRRTSMFKEELESPSSDHY 230 Query: 169 NENYGRQIIAQP 204 NE+ Q + +P Sbjct: 231 NESIFSQSVDEP 242
>TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 673 Score = 30.4 bits (67), Expect = 1.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 62 GRRLFEAAGMNQQAALPKTSRMCRDIKSHTPRQTDQMKTTVDK 190 GRR+ +AG Q L + R R+I H P+ + +K T +K Sbjct: 183 GRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEK 225
>SYY_NITWN (Q3SS12) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 288 T+ VY +W+Y N+E + R+L++F L +A L Sbjct: 250 TMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAAL 290
>GSPJ_VIBCH (P45776) General secretion pathway protein J precursor (Cholera| toxin secretion protein epsJ) Length = 221 Score = 29.3 bits (64), Expect = 2.3 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 37 SLMKDEHHGQAFIRGGWHEP 96 SL+ + HG F+R GWH P Sbjct: 95 SLLDSDQHGLLFVRLGWHNP 114
>CAD_DROME (P09085) Homeotic protein caudal| Length = 427 Score = 28.9 bits (63), Expect = 3.0 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = +1 Query: 55 HHGQAFIRGGWHEPASSTAQD-LTNVP--RHQI 144 H A G WH PASSTA + + NVP HQ+ Sbjct: 73 HSAAAASAGEWHSPASSTADNFVQNVPTSAHQL 105
>ZIPA_ECOLI (P77173) Cell division protein zipA| Length = 328 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Frame = +1 Query: 49 DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 225 DE G+ + H PA++ + P+HQ P Y QP PP Sbjct: 60 DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPP--------YASAQPRQPVQQPPEA 111 Query: 226 *MRPLHAPNP 255 + P HAP+P Sbjct: 112 QVPPQHAPHP 121
>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog| Length = 332 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Frame = +1 Query: 49 DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 225 DE G+ + H PA++ + P+HQ P Y QP PP Sbjct: 60 DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPP--------YASAQPRQPVQQPPEA 111 Query: 226 *MRPLHAPNP 255 + P HAP P Sbjct: 112 QVPPQHAPRP 121
>RAD60_SCHPO (Q9USX3) DNA repair protein rad60| Length = 406 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Frame = +3 Query: 189 NHSAADTSPSRSMNAPSSCPESALVAVALAVDRQWNCSSQATV----LESVKHLQVTASL 356 N +DT+P+ +N P+SA+ V V +N + A + + S L T+SL Sbjct: 80 NQDVSDTTPNACLNEGRHSPKSAISCVTQPVSPVYNTRAAANLRNNSINSEAALSTTSSL 139 Query: 357 APLQVAHVLPE 389 A L E Sbjct: 140 LDDDFARRLEE 150
>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog| Length = 327 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Frame = +1 Query: 49 DEHHGQAFIRGGWHEPASSTAQDLTNV-PRHQIAHPTTDRPNENYGRQIIAQPTLHPPAR 225 DE G+ + H PA++ + P+HQ P Y QP PP Sbjct: 59 DEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYLPP--------YASAQPRQPVQQPPEA 110 Query: 226 *MRPLHAPNP 255 + P HAP P Sbjct: 111 QVPPQHAPRP 120
>COBQ_VIBF1 (Q5E0T7) Cobyric acid synthase| Length = 495 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +1 Query: 13 RQRNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVPRHQIAHPTTDRPNENYGRQI 192 + +N+ALNS + ++ GG A + D V H +P +PN + G Q+ Sbjct: 40 KPQNMALNSAVTED--------GGEIGRAQALQADAARVKPHVHMNPILLKPNTDIGAQV 91 Query: 193 IAQ 201 I Q Sbjct: 92 IVQ 94
>ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 19) (DHHC-19) Length = 347 Score = 27.7 bits (60), Expect = 6.8 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -2 Query: 86 QPPRINACPWCSSFIREFN 30 +PPR CPWC+ + +F+ Sbjct: 121 RPPRTYHCPWCNICVEDFD 139
>SYY_RHILO (Q98NS5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -2 Query: 395 YGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 288 Y FW+Y N E + R+L++F L +A L Sbjct: 255 YDFWQYWRNTEDADVERFLKIFTRLPLPEIARLAAL 290
>SYY_BRUSU (Q8G105) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/40 (27%), Positives = 19/40 (47%) Frame = -2 Query: 407 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 288 + Y FW+Y N E + R+L+++ L +A L Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
>SYY_BRUME (Q8YGV8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/40 (27%), Positives = 19/40 (47%) Frame = -2 Query: 407 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 288 + Y FW+Y N E + R+L+++ L +A L Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
>SYY_BRUAB (Q57DI5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/40 (27%), Positives = 19/40 (47%) Frame = -2 Query: 407 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 288 + Y FW+Y N E + R+L+++ L +A L Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
>SYY_BRUA2 (Q2YNR0) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/40 (27%), Positives = 19/40 (47%) Frame = -2 Query: 407 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 288 + Y FW+Y N E + R+L+++ L +A L Sbjct: 251 MLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAEL 290
>ZDH19_HUMAN (Q8WVZ1) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 19) (DHHC-19) Length = 282 Score = 27.7 bits (60), Expect = 6.8 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -2 Query: 86 QPPRINACPWCSSFIREFN 30 +PPR CPWC+ + +F+ Sbjct: 121 RPPRTYHCPWCNICVEDFD 139
>YTFB_ECOLI (P39310) Hypothetical protein ytfB| Length = 212 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = +3 Query: 246 PESALVAVALAVDRQWNCSSQATVLESVKHLQVTASLAPLQVAHVLPEPIHTGQ 407 P + +V +D Q SQ E ++ VT P QVA V PEPI GQ Sbjct: 54 PNAPVVTREAQLDIQ--SQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQ 105
>SDS3_MOUSE (Q8BR65) Sin3 histone deacetylase corepressor complex component| SDS3 (Suppressor of defective silencing 3 protein homolog) Length = 328 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = +3 Query: 135 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAVALAVDRQWNCS 302 T + D +T KL+ A+ +SP P+ P E+ + L D++W Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271 Query: 303 SQATVLES 326 SQA LES Sbjct: 272 SQAIYLES 279
>SDS3_HUMAN (Q9H7L9) Sin3 histone deacetylase corepressor complex component| SDS3 (Suppressor of defective silencing 3 protein homolog) Length = 328 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = +3 Query: 135 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAVALAVDRQWNCS 302 T + D +T KL+ A+ +SP P+ P E+ + L D++W Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271 Query: 303 SQATVLES 326 SQA LES Sbjct: 272 SQAIYLES 279
>ETFB_MOUSE (Q9DCW4) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 234 PSSCPESALVAVALAVDRQWNCSSQATVLESVKHLQVTASLAPL 365 PS C E+ A+A+ DR + ES+ LQV LA L Sbjct: 67 PSQCQETIRTALAMGADRGIHVEIPGAQAESLGPLQVARVLAKL 110
>SYY_RHIME (Q92PK5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -2 Query: 407 LTGVYGFWKYVSNLERRETRRYLEMFYAL 321 + G Y FW+Y N E + R+L+++ L Sbjct: 251 MLGPYEFWQYWRNTEDADVARFLKLYTTL 279
>SYY_AGRT5 (Q8UED2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -2 Query: 407 LTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 288 L VY FW+Y N E + R+ ++F L +A L Sbjct: 251 LLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIARIATL 290
>PNS1_DEBHA (Q6BIV4) Protein PNS1| Length = 513 Score = 27.3 bits (59), Expect = 8.8 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -2 Query: 410 TLTGVYGFWKYVSNLERRETR 348 T+ G+YG W Y+SN ++ E + Sbjct: 279 TIAGIYGTWYYLSNSDQGEPK 299
>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix| nude) Length = 648 Score = 27.3 bits (59), Expect = 8.8 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -1 Query: 387 LEVREQPGEARDSPLP 340 LE+R QPG +DSPLP Sbjct: 479 LELRAQPGTPQDSPLP 494 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,551,390 Number of Sequences: 219361 Number of extensions: 1095236 Number of successful extensions: 3300 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 3033 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3188 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
