ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.20
2dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.20
3gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, com... 42 0.78
4gb|AC133518.3| Mus musculus BAC clone RP23-138G24 from chromosom... 42 0.78
5gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome... 42 0.78
6gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, co... 42 0.78
7emb|AL449196.1| Human DNA sequence from clone RP11-61K10 on chro... 42 0.78
8emb|AL031666.6|HS569M23 Human DNA sequence from clone RP4-569M23... 42 0.78
9gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome... 42 0.78
10gb|AC158380.2| Mus musculus BAC clone RP24-178I16 from chromosom... 42 0.78
11gb|AC138621.4| Mus musculus BAC clone RP23-273E16 from 6, comple... 42 0.78
12gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome... 42 0.78
13gb|AC122839.4| Mus musculus BAC clone RP23-193K9 from 8, complet... 40 3.1
14gb|AC125215.4| Mus musculus BAC clone RP23-93K19 from 6, complet... 40 3.1
15gb|AC004130.1| Homo sapiens BAC clone CTA-293F17 from 7, complet... 40 3.1
16gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, comple... 40 3.1
17emb|BX957234.7| Zebrafish DNA sequence from clone CH211-286L10 i... 40 3.1
18emb|Z68193.1|HSQC8B6 Human DNA sequence from clone XX-QC8B6 on c... 40 3.1
19emb|AL713859.9| Human DNA sequence from clone RP11-242B9 on chro... 40 3.1
20emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chr... 40 3.1
21gb|AC092402.2| Homo sapiens chromosome X clone XXcos-27F1-2, XXc... 40 3.1
22gb|AC011061.13| Homo sapiens chromosome 17, clone RP11-12H18, co... 40 3.1
23gb|AC023844.6| Homo sapiens chromosome 15, clone RP11-427O16, co... 40 3.1
24gb|AC008677.5| Homo sapiens chromosome 5 clone CTB-47B8, complet... 40 3.1
25gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Can... 40 3.1
26emb|BX649431.16| Zebrafish DNA sequence from clone DKEYP-44B5 in... 40 3.1
27gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosom... 40 3.1
28gb|AC021677.4|AC021677 Homo sapiens chromosome 15, clone RP11-62... 40 3.1
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
30gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, comple... 40 3.1
31gb|AC154745.3| Mus musculus BAC clone RP24-395F6 from chromosome... 40 3.1
32gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, com... 40 3.1
33gb|AC007383.4| Homo sapiens BAC clone RP11-310K15 from 2, comple... 40 3.1
34gb|AC007021.3|AC007021 Homo sapiens PAC clone RP6-155F9 from Xq2... 40 3.1
35emb|BX005106.5| Zebrafish DNA sequence from clone DKEY-188I13, c... 40 3.1
36dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.1
37dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.1
38gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.67... 40 3.1
39emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 40 3.1
40emb|CT025551.9| Mouse DNA sequence from clone RP23-414I10 on chr... 40 3.1
41gb|AC132409.3| Mus musculus BAC clone RP23-346B1 from 6, complet... 40 3.1
42dbj|AB209429.1| Homo sapiens mRNA for integrin, beta 8 variant p... 40 3.1 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 78      agtactgtatacaaaagaagac 99
               ||||||||||||||||||||||
Sbjct: 2517433 agtactgtatacaaaagaagac 2517454



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 78      agtactgtatacaaaagaagac 99
               ||||||||||||||||||||||
Sbjct: 2516088 agtactgtatacaaaagaagac 2516109
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>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0416D03
          Length = 157112

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 78    agtactgtatacaaaagaagac 99
             ||||||||||||||||||||||
Sbjct: 71854 agtactgtatacaaaagaagac 71875



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 78    agtactgtatacaaaagaagac 99
             ||||||||||||||||||||||
Sbjct: 70509 agtactgtatacaaaagaagac 70530
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>gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, complete sequence
          Length = 176450

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    agccatgagaagtactgtata 88
             |||||||||||||||||||||
Sbjct: 24912 agccatgagaagtactgtata 24932
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>gb|AC133518.3| Mus musculus BAC clone RP23-138G24 from chromosome 7, complete sequence
          Length = 195464

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     gctattcttttcctttctttc 54
              |||||||||||||||||||||
Sbjct: 163829 gctattcttttcctttctttc 163809
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>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence
          Length = 165927

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    ctattcttttcctttctttct 55
             |||||||||||||||||||||
Sbjct: 85573 ctattcttttcctttctttct 85593
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>gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, complete sequence
          Length = 199600

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    agccatgagaagtactgtata 88
             |||||||||||||||||||||
Sbjct: 24110 agccatgagaagtactgtata 24090
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>emb|AL449196.1| Human DNA sequence from clone RP11-61K10 on chromosome 6 Contains part
             of the gene for a novel protein similar to FLJ13018 and
             other hypothetical proteins, complete sequence
          Length = 33136

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 51    tttctgaaacaaggataagccatga 75
             ||||| |||||||||||||||||||
Sbjct: 15232 tttctaaaacaaggataagccatga 15256
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>emb|AL031666.6|HS569M23 Human DNA sequence from clone RP4-569M23 on chromosome 20q12-13.1
              Contains the PRKCBP1 gene for protein kinase C binding
              protein 1, a putative novel gene, ESTs, STSs and GSSs,
              complete sequence
          Length = 116370

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 33     ggctattcttttcctttctttctga 57
              |||| ||||||||||||||||||||
Sbjct: 114761 ggcttttcttttcctttctttctga 114737
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>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence
          Length = 206648

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     gctattcttttcctttctttc 54
              |||||||||||||||||||||
Sbjct: 100562 gctattcttttcctttctttc 100542
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>gb|AC158380.2| Mus musculus BAC clone RP24-178I16 from chromosome 6, complete sequence
          Length = 168179

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    ataagccatgagaagtactgt 85
             |||||||||||||||||||||
Sbjct: 33357 ataagccatgagaagtactgt 33377
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>gb|AC138621.4| Mus musculus BAC clone RP23-273E16 from 6, complete sequence
          Length = 225376

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     ataagccatgagaagtactgt 85
              |||||||||||||||||||||
Sbjct: 158150 ataagccatgagaagtactgt 158170
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>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence
          Length = 217178

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     gctattcttttcctttctttc 54
              |||||||||||||||||||||
Sbjct: 203403 gctattcttttcctttctttc 203423
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>gb|AC122839.4| Mus musculus BAC clone RP23-193K9 from 8, complete sequence
          Length = 177322

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    gaaggctattcttttccttt 49
             ||||||||||||||||||||
Sbjct: 81243 gaaggctattcttttccttt 81262
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>gb|AC125215.4| Mus musculus BAC clone RP23-93K19 from 6, complete sequence
          Length = 215584

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 38     ttcttttcctttctttctgaaaca 61
              ||||||| ||||||||||||||||
Sbjct: 114751 ttctttttctttctttctgaaaca 114728
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>gb|AC004130.1| Homo sapiens BAC clone CTA-293F17 from 7, complete sequence
          Length = 116215

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aacaaggataagccatgaga 77
             ||||||||||||||||||||
Sbjct: 65714 aacaaggataagccatgaga 65733
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>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ataaaaaagaaggctattct 41
             ||||||||||||||||||||
Sbjct: 61243 ataaaaaagaaggctattct 61224
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>emb|BX957234.7| Zebrafish DNA sequence from clone CH211-286L10 in linkage group 23,
             complete sequence
          Length = 180834

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    aaaaagaaggctattctttt 44
             ||||||||||||||||||||
Sbjct: 79256 aaaaagaaggctattctttt 79275
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>emb|Z68193.1|HSQC8B6 Human DNA sequence from clone XX-QC8B6 on chromosome X Contains the
             OPN1LW gene for opsin 1 (cone pigments),
             long-wave-sensitive (color blindness, protan) and the 3'
             end of the CXorf2B gene for chromosome X open reading
             frame 2B, complete sequence
          Length = 21480

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tattcttttcctttctttct 55
             ||||||||||||||||||||
Sbjct: 10867 tattcttttcctttctttct 10848
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>emb|AL713859.9| Human DNA sequence from clone RP11-242B9 on chromosome 1 Contains part
             of a novel gene (FLJ10986), complete sequence
          Length = 105393

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    cttttcctttctttctgaaa 59
             ||||||||||||||||||||
Sbjct: 25703 cttttcctttctttctgaaa 25722
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>emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chromosome 10 Contains part
              of a novel gene (DKFZp761L0424) (KIAA1217) and three novel
              genes (FLJ11983 FLJ14139), complete sequence
          Length = 190429

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tcctttctttctgaaacaag 63
              ||||||||||||||||||||
Sbjct: 132501 tcctttctttctgaaacaag 132482
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>gb|AC092402.2| Homo sapiens chromosome X clone XXcos-27F1-2, XXcos-54C1-1, Qc-16D5 map
             q28, complete sequence
          Length = 97757

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tattcttttcctttctttct 55
             ||||||||||||||||||||
Sbjct: 69746 tattcttttcctttctttct 69727



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tattcttttcctttctttct 55
             ||||||||||||||||||||
Sbjct: 32628 tattcttttcctttctttct 32609
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>gb|AC011061.13| Homo sapiens chromosome 17, clone RP11-12H18, complete sequence
          Length = 165643

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 32    aggctattcttttcctttctttct 55
             |||||||||||||| |||||||||
Sbjct: 87694 aggctattcttttcttttctttct 87671
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>gb|AC023844.6| Homo sapiens chromosome 15, clone RP11-427O16, complete sequence
          Length = 188788

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    cctctgtgtgcctccaacac 140
              ||||||||||||||||||||
Sbjct: 143662 cctctgtgtgcctccaacac 143681
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>gb|AC008677.5| Homo sapiens chromosome 5 clone CTB-47B8, complete sequence
          Length = 160929

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     ttcctttctttctgaaacaa 62
              ||||||||||||||||||||
Sbjct: 101078 ttcctttctttctgaaacaa 101059
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>gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178328

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    aggctattcttttcctttctttct 55
             ||||| ||||||||||||||||||
Sbjct: 61252 aggcttttcttttcctttctttct 61275
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>emb|BX649431.16| Zebrafish DNA sequence from clone DKEYP-44B5 in linkage group 14,
              complete sequence
          Length = 185020

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aaaaagaaggctattctttt 44
              ||||||||||||||||||||
Sbjct: 135879 aaaaagaaggctattctttt 135898
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>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence
          Length = 196331

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tattcttttcctttctttct 55
              ||||||||||||||||||||
Sbjct: 119275 tattcttttcctttctttct 119256
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>gb|AC021677.4|AC021677 Homo sapiens chromosome 15, clone RP11-62D2, complete sequence
          Length = 177762

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    cctctgtgtgcctccaacac 140
              ||||||||||||||||||||
Sbjct: 131396 cctctgtgtgcctccaacac 131415
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 162      gtattccttctgggaaaatg 181
                ||||||||||||||||||||
Sbjct: 22320975 gtattccttctgggaaaatg 22320956



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 197      cctcttttcagcagggaaaa 216
                ||||||||||||||||||||
Sbjct: 22320937 cctcttttcagcagggaaaa 22320918
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>gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, complete sequence
          Length = 190436

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tattcttttcctttctttct 55
             ||||||||||||||||||||
Sbjct: 52518 tattcttttcctttctttct 52537
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>gb|AC154745.3| Mus musculus BAC clone RP24-395F6 from chromosome 13, complete sequence
          Length = 144172

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 25     aaaaagaaggctattcttttcctt 48
              |||||||||||| |||||||||||
Sbjct: 139456 aaaaagaaggcttttcttttcctt 139433
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>gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, complete sequence
          Length = 159520

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    gctattcttttcctttcttt 53
             ||||||||||||||||||||
Sbjct: 94348 gctattcttttcctttcttt 94367
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>gb|AC007383.4| Homo sapiens BAC clone RP11-310K15 from 2, complete sequence
          Length = 214978

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     gaaggctattcttttcctttcttt 53
              ||||||| ||||||||||||||||
Sbjct: 150106 gaaggcttttcttttcctttcttt 150129
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>gb|AC007021.3|AC007021 Homo sapiens PAC clone RP6-155F9 from Xq23, complete sequence
          Length = 122674

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ataagaagtataaaaaagaa 32
             ||||||||||||||||||||
Sbjct: 11931 ataagaagtataaaaaagaa 11912
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>emb|BX005106.5| Zebrafish DNA sequence from clone DKEY-188I13, complete sequence
          Length = 216863

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    cctcttttcagcagggaaaa 216
              ||||||||||||||||||||
Sbjct: 157864 cctcttttcagcagggaaaa 157845
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>dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162C23, full
            insert sequence
          Length = 3754

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gtattccttctgggaaaatg 181
            ||||||||||||||||||||
Sbjct: 3623 gtattccttctgggaaaatg 3604



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  cctcttttcagcagggaaaa 216
            ||||||||||||||||||||
Sbjct: 3585 cctcttttcagcagggaaaa 3566
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>dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C12, full
            insert sequence
          Length = 1344

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gtattccttctgggaaaatg 181
            ||||||||||||||||||||
Sbjct: 1207 gtattccttctgggaaaatg 1188



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  cctcttttcagcagggaaaa 216
            ||||||||||||||||||||
Sbjct: 1169 cctcttttcagcagggaaaa 1150
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>gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.678_P_16, complete sequence
          Length = 156420

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     aggctattcttttcctttctttct 55
              ||||| ||||||||||||||||||
Sbjct: 136182 aggcttttcttttcctttctttct 136159
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   gtattccttctgggaaaatg 181
             ||||||||||||||||||||
Sbjct: 71879 gtattccttctgggaaaatg 71860



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   cctcttttcagcagggaaaa 216
             ||||||||||||||||||||
Sbjct: 71841 cctcttttcagcagggaaaa 71822
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>emb|CT025551.9| Mouse DNA sequence from clone RP23-414I10 on chromosome 13, complete
              sequence
          Length = 196737

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 25     aaaaagaaggctattcttttcctt 48
              |||||||||||| |||||||||||
Sbjct: 149305 aaaaagaaggcttttcttttcctt 149282
to top
>gb|AC132409.3| Mus musculus BAC clone RP23-346B1 from 6, complete sequence
          Length = 207528

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    cctcttttcagcagggaaaa 216
              ||||||||||||||||||||
Sbjct: 102182 cctcttttcagcagggaaaa 102163
to top
>dbj|AB209429.1| Homo sapiens mRNA for integrin, beta 8 variant protein
          Length = 5574

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   aacaaggataagccatgaga 77
            ||||||||||||||||||||
Sbjct: 5492 aacaaggataagccatgaga 5511


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,380,911
Number of Sequences: 3902068
Number of extensions: 3380911
Number of successful extensions: 116683
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116509
Number of HSP's gapped (non-prelim): 174
length of query: 239
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 217
effective length of database: 17,147,199,772
effective search space: 3720942350524
effective search space used: 3720942350524
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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