Clone Name | rbastl19g04 |
---|---|
Clone Library Name | barley_pub |
>YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in chromosome III| Length = 654 Score = 31.2 bits (69), Expect = 0.65 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 14 QKKVHVEYENFNKLQSTNILLKSLVAEVHFITYKDATSDLPVL*C 148 +K++ + F K++ IL K +A VHF+ +DA + L C Sbjct: 312 EKEIEEAFGKFGKIEHIKILSKKNIAFVHFLNIRDAIKVVRTLSC 356
>CYPC_BACSU (O31440) Cytochrome P450 152A1 (EC 1.14.-.-) (P450BsBeta) (Fatty| acid beta-hydroxylase) Length = 417 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +1 Query: 163 LTAQVPHVVSSQESNFTLK---CYINNRTLALNKRKITMSTRAQNFICITTLEAS 318 + Q+PH S S LK +I NRT N +NFIC+T EA+ Sbjct: 1 MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAA 55
>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 163 LTAQVPHVVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 294 +T + PH NFT K Y N +L N +KI ++ +NF+ Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524
>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 163 LTAQVPHVVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 294 +T + PH NFT K Y N +L N +KI ++ +NF+ Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Frame = -2 Query: 329 VEVIEASNVVMQMKFWALVDIVIFLLFSARVLLFM*HFKVKFD--------SWDDTT*GT 174 VE++ A NV+ Q++ IV LF ++ +F ++V+ S DDT Sbjct: 147 VEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEVESGEVLQISRTSSDDTGIDE 206 Query: 173 CAVRNPGHDIKELADHSWHPYT 108 C VR PG K + P T Sbjct: 207 CPVRLPGSQEKAILGRCVVPLT 228
>ALP6_SCHPO (Q9USQ2) Spindle pole body component alp6 (Altered polarity protein| 6) Length = 832 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +1 Query: 178 PHVVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFIC-ITTLEASITSTCLL 339 P V S + + K +IN+++LAL K +S NF+ I +L++ I + L Sbjct: 251 PSVSQSIDGDNVSKAFINDQSLALQSLKSVISKELTNFLALIASLDSQIRADASL 305
>CD2_HORSE (P37998) T-cell surface antigen CD2 precursor| Length = 347 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +1 Query: 202 SNFTLKCYINNRTLALNKRKITMSTRAQN----FICITTLEASITSTCLLI 342 ++F LK Y+N R + + RK+ + RA N F C S S+ ++I Sbjct: 147 TDFELKLYLNGRMIQKSPRKVIVYKRASNQIASFKCTANNTVSEESSSVVI 197
>RNAS8_MIOTA (Q8SPZ7) Ribonuclease 8 precursor (EC 3.1.27.-) (RNase 8)| Length = 154 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -3 Query: 205 LILGMTLHEVPVQLEILDMTSKNWQITRGI 116 L+LG+ + ++PV + DMTS W T+ + Sbjct: 14 LLLGLRVAQIPVSAKPKDMTSSQWFKTQHV 43
>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to| Peronospora parasitica protein 13) Length = 835 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +2 Query: 8 STQKKVHVEYENFNKLQSTNILLKSLVAEVH 100 S +++VHV + + KL+S +L + EVH Sbjct: 687 SKERRVHVSWASLTKLESLRVLKLATPTEVH 717 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,249,095 Number of Sequences: 219361 Number of extensions: 845090 Number of successful extensions: 1672 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1651 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1672 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)