ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome... 78 2e-11
2gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome... 78 2e-11
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
4dbj|AK070398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
5dbj|AK065765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
6gb|BT017487.1| Zea mays clone EL01N0412H03.c mRNA sequence 62 1e-06
7gb|AC130187.4| Atelerix albiventris clone LB4-344F17, complete s... 44 0.31
8gb|AC124906.3| Equus caballus clone CH241-268I16, complete sequence 44 0.31
9gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 44 0.31
10gb|AC130784.3| Atelerix albiventris clone LB4-112D1, complete se... 44 0.31
11gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequ... 44 0.31
12gb|AC148202.3| Carollia perspicillata clone 598J23, complete seq... 44 0.31
13dbj|AP004492.1| Lotus japonicus genomic DNA, chromosome 4, clone... 44 0.31
14gb|DP000020.1| Equus caballus target 1 genomic scaffold 44 0.31
15gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 44 0.31
16gb|AC087775.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.2
17gb|AC184157.2| Pan troglodytes BAC clone CH251-31B9 from chromos... 42 1.2
18gb|AC184054.2| Pan troglodytes BAC clone CH251-706J5 from chromo... 42 1.2
19emb|Z48716.1|CEF59B10 Caenorhabditis elegans Cosmid F59B10, comp... 42 1.2
20gb|AC007321.2| Homo sapiens BAC clone RP11-507C1 from 7, complet... 42 1.2
21ref|NM_031506.1| Rattus norvegicus cystic fibrosis transmembrane... 42 1.2
22gb|AC119088.4| Rattus norvegicus 4 BAC CH230-222H3 (Children's H... 42 1.2
23gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101... 42 1.2
24gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 42 1.2
25emb|AJ224431.1|RNCFTR3UT Rattus norvegicus CFTR gene 42 1.2
26dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.2
27dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.2
28emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chro... 42 1.2
29gb|AC162373.11| Mus musculus chromosome 18, clone RP23-410M11, c... 40 4.8
30gb|AY392539.1| Porcine teschovirus isolate UKG/170/80 polyprotei... 40 4.8
31gb|AY392534.1| Porcine teschovirus isolate DS 756/93 polyprotein... 40 4.8
32gb|AC095999.8| Rattus norvegicus 4 BAC CH230-12B2 (Children's Ho... 40 4.8
33gb|AC161886.4| Pan troglodytes BAC clone CH251-708N9 from chromo... 40 4.8
34gb|AC144408.3| Mus musculus BAC clone RP24-326P8 from chromosome... 40 4.8
35emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in... 40 4.8
36gb|AC126564.7| Homo sapiens 12 BAC RP11-638F5 (Roswell Park Canc... 40 4.8
37emb|CR381570.12| Zebrafish DNA sequence from clone CH211-74M13 i... 40 4.8
38emb|BX322537.14| Zebrafish DNA sequence from clone CH211-262H21 ... 40 4.8
39gb|AC164165.2| Mus musculus BAC clone RP23-145F16 from chromosom... 40 4.8
40dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 4.8
41gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complet... 40 4.8
42gb|AF296101.1|AF296101 Porcine teschovirus strain Sek 549/98 pol... 40 4.8
43gb|AF296091.1|AF296091 Porcine teschovirus strain PS 37 polyprot... 40 4.8
44gb|AC146074.4| Pan troglodytes BAC clone RP43-15D8 from chromoso... 40 4.8
45emb|AL357615.7|HS373D10 Homo sapiens chromosome 9 BAC RP11-373D1... 40 4.8
46emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 4.8
47emb|AL391667.19| Human DNA sequence from clone RP11-214L15 on ch... 40 4.8 
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06,
              complete sequence
          Length = 134001

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                 
Query: 310    gaggcctcaattacctccacttgtctcttaattcctttttctcagaccaaa 360
              ||||||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 113251 gaggcctcacttacctccacttatctcttaactcctttttctcagaccaaa 113201
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>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0042F15, complete sequence
          Length = 162959

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                
Query: 310   gaggcctcaattacctccacttgtctcttaattcctttttctcagaccaaa 360
             ||||||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 20440 gaggcctcacttacctccacttatctcttaactcctttttctcagaccaaa 20390
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                  
Query: 310     gaggcctcaattacctccacttgtctcttaattcctttttctcagaccaaa 360
               ||||||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 7835665 gaggcctcacttacctccacttatctcttaactcctttttctcagaccaaa 7835615
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>dbj|AK070398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048G06, full
            insert sequence
          Length = 3440

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                               
Query: 310  gaggcctcaattacctccacttgtctcttaattcctttttctcagaccaaa 360
            ||||||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 3078 gaggcctcacttacctccacttatctcttaactcctttttctcagaccaaa 3028
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>dbj|AK065765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040F09, full
            insert sequence
          Length = 2572

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                               
Query: 310  gaggcctcaattacctccacttgtctcttaattcctttttctcagaccaaa 360
            ||||||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 2215 gaggcctcacttacctccacttatctcttaactcctttttctcagaccaaa 2165
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>gb|BT017487.1| Zea mays clone EL01N0412H03.c mRNA sequence
          Length = 1066

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 322 acctccacttgtctcttaattcctttttctcagaccaaa 360
           |||||||||||||||| || |||||||||||||||||||
Sbjct: 663 acctccacttgtctctcaactcctttttctcagaccaaa 625
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>gb|AC130187.4| Atelerix albiventris clone LB4-344F17, complete sequence
          Length = 150117

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 284    aaaatttcatttgcatcacaacatta 309
              ||||||||||||||||||||| ||||
Sbjct: 131011 aaaatttcatttgcatcacaaaatta 130986
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>gb|AC124906.3| Equus caballus clone CH241-268I16, complete sequence
          Length = 202908

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 284    aaaatttcatttgcatcacaacatta 309
              ||||||||||||||||||||| ||||
Sbjct: 115191 aaaatttcatttgcatcacaaaatta 115166
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 284     aaaatttcatttgcatcacaacatta 309
               ||||||||||||||||||||| ||||
Sbjct: 1827450 aaaatttcatttgcatcacaaaatta 1827425
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>gb|AC130784.3| Atelerix albiventris clone LB4-112D1, complete sequence
          Length = 166122

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 284   aaaatttcatttgcatcacaacatta 309
             ||||||||||||||||||||| ||||
Sbjct: 53460 aaaatttcatttgcatcacaaaatta 53435
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>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence
          Length = 156330

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 284   aaaatttcatttgcatcacaacatta 309
             ||||||||||||||||||||| ||||
Sbjct: 19580 aaaatttcatttgcatcacaaaatta 19555
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>gb|AC148202.3| Carollia perspicillata clone 598J23, complete sequence
          Length = 130753

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 284    aaaatttcatttgcatcacaacatta 309
              ||||||||||||||||||||| ||||
Sbjct: 121925 aaaatttcatttgcatcacaaaatta 121900
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>dbj|AP004492.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025a,
            complete sequence
          Length = 51575

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 200  aatcaaatttcactttgaaatg 221
            ||||||||||||||||||||||
Sbjct: 2106 aatcaaatttcactttgaaatg 2127
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 284     aaaatttcatttgcatcacaacatta 309
               ||||||||||||||||||||| ||||
Sbjct: 1505648 aaaatttcatttgcatcacaaaatta 1505623
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 284     aaaatttcatttgcatcacaacatta 309
               ||||||||||||||||||||| ||||
Sbjct: 1281640 aaaatttcatttgcatcacaaaatta 1281615
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>gb|AC087775.2| Rattus norvegicus strain Brown Norway clone RP31-464J4, complete
             sequence
          Length = 185081

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   aaaatttcatttgcatcacaa 304
             |||||||||||||||||||||
Sbjct: 76568 aaaatttcatttgcatcacaa 76548
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>gb|AC184157.2| Pan troglodytes BAC clone CH251-31B9 from chromosome 15, complete
              sequence
          Length = 167965

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 214    ttgaaatgttacataaataatagaa 238
              ||||||||||||||||| |||||||
Sbjct: 136889 ttgaaatgttacataaaaaatagaa 136865
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>gb|AC184054.2| Pan troglodytes BAC clone CH251-706J5 from chromosome 15, complete
             sequence
          Length = 177821

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 214   ttgaaatgttacataaataatagaa 238
             ||||||||||||||||| |||||||
Sbjct: 14591 ttgaaatgttacataaaaaatagaa 14615
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>emb|Z48716.1|CEF59B10 Caenorhabditis elegans Cosmid F59B10, complete sequence
          Length = 27428

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   tttcactttgaaatgttacat 227
             |||||||||||||||||||||
Sbjct: 25727 tttcactttgaaatgttacat 25707
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>gb|AC007321.2| Homo sapiens BAC clone RP11-507C1 from 7, complete sequence
          Length = 158770

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    gatctgccagttctttgatgt 148
              |||||||||||||||||||||
Sbjct: 104138 gatctgccagttctttgatgt 104118
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>ref|NM_031506.1| Rattus norvegicus cystic fibrosis transmembrane conductance regulator
            homolog (Cftr), mRNA
          Length = 6287

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  aaaatttcatttgcatcacaa 304
            |||||||||||||||||||||
Sbjct: 5872 aaaatttcatttgcatcacaa 5852
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>gb|AC119088.4| Rattus norvegicus 4 BAC CH230-222H3 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 224687

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 284    aaaatttcatttgcatcacaa 304
              |||||||||||||||||||||
Sbjct: 123697 aaaatttcatttgcatcacaa 123717
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>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map 15q21.1,
              complete sequence
          Length = 185145

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 214    ttgaaatgttacataaataatagaa 238
              ||||||||||||||||| |||||||
Sbjct: 113538 ttgaaatgttacataaaaaatagaa 113562
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 284     aaaatttcatttgcatcacaa 304
               |||||||||||||||||||||
Sbjct: 1409740 aaaatttcatttgcatcacaa 1409720
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>emb|AJ224431.1|RNCFTR3UT Rattus norvegicus CFTR gene
          Length = 5082

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  aaaatttcatttgcatcacaa 304
            |||||||||||||||||||||
Sbjct: 1962 aaaatttcatttgcatcacaa 1942
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>dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1552D7
          Length = 160912

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    tgtctcttaattcctttttct 351
              |||||||||||||||||||||
Sbjct: 127623 tgtctcttaattcctttttct 127603
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>dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1742H10
          Length = 155723

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   tgtctcttaattcctttttct 351
             |||||||||||||||||||||
Sbjct: 46779 tgtctcttaattcctttttct 46759
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>emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chromosome 2, complete
              sequence
          Length = 241249

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 214    ttgaaatgttacataaataat 234
              |||||||||||||||||||||
Sbjct: 132441 ttgaaatgttacataaataat 132461
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>gb|AC162373.11| Mus musculus chromosome 18, clone RP23-410M11, complete sequence
          Length = 173382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    gaatcaaatttcactttgaaatgt 222
              ||||||||||||| ||||||||||
Sbjct: 107600 gaatcaaatttcagtttgaaatgt 107577
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>gb|AY392539.1| Porcine teschovirus isolate UKG/170/80 polyprotein gene, partial
           cds
          Length = 3300

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 tgtcatcccaagaatcaaat 207
           ||||||||||||||||||||
Sbjct: 710 tgtcatcccaagaatcaaat 729
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>gb|AY392534.1| Porcine teschovirus isolate DS 756/93 polyprotein gene, partial cds
          Length = 3721

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 tgtcatcccaagaatcaaat 207
           ||||||||||||||||||||
Sbjct: 734 tgtcatcccaagaatcaaat 753
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>gb|AC095999.8| Rattus norvegicus 4 BAC CH230-12B2 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 217673

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    tttgaaatgttacataaata 232
              ||||||||||||||||||||
Sbjct: 181450 tttgaaatgttacataaata 181469
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>gb|AC161886.4| Pan troglodytes BAC clone CH251-708N9 from chromosome 7, complete
              sequence
          Length = 205419

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 207    tttcactttgaaatgttacataaataat 234
              |||| ||||||||||| |||||||||||
Sbjct: 187735 tttccctttgaaatgtcacataaataat 187708
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>gb|AC144408.3| Mus musculus BAC clone RP24-326P8 from chromosome 16, complete sequence
          Length = 167601

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aagttacaaagcactaacat 69
             ||||||||||||||||||||
Sbjct: 72017 aagttacaaagcactaacat 71998
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>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24,
             complete sequence
          Length = 152666

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ttacaaagcactaacattct 72
             ||||||||||||||||||||
Sbjct: 62955 ttacaaagcactaacattct 62936
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>gb|AC126564.7| Homo sapiens 12 BAC RP11-638F5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121242

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   ttgaaatgttacataaataa 233
             ||||||||||||||||||||
Sbjct: 11611 ttgaaatgttacataaataa 11592
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>emb|CR381570.12| Zebrafish DNA sequence from clone CH211-74M13 in linkage group 10,
             complete sequence
          Length = 151591

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   tttcatttgcatcacaacat 307
             ||||||||||||||||||||
Sbjct: 10212 tttcatttgcatcacaacat 10231
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>emb|BX322537.14| Zebrafish DNA sequence from clone CH211-262H21 in linkage group 23,
            complete sequence
          Length = 26459

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ggtcgctgaggtacatttca 104
            ||||||||||||||||||||
Sbjct: 9306 ggtcgctgaggtacatttca 9325
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>gb|AC164165.2| Mus musculus BAC clone RP23-145F16 from chromosome 16, complete
             sequence
          Length = 214546

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aagttacaaagcactaacat 69
             ||||||||||||||||||||
Sbjct: 66562 aagttacaaagcactaacat 66543
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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 30      ttgaatatgagaacttcaat 49
               ||||||||||||||||||||
Sbjct: 1266047 ttgaatatgagaacttcaat 1266028
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>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence
          Length = 161391

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    taacattctgctgaaaagtttggt 87
             ||||||| ||||||||||||||||
Sbjct: 87888 taacattttgctgaaaagtttggt 87865
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>gb|AF296101.1|AF296101 Porcine teschovirus strain Sek 549/98 polyprotein gene, partial cds
          Length = 3434

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 tgtcatcccaagaatcaaat 207
           ||||||||||||||||||||
Sbjct: 458 tgtcatcccaagaatcaaat 477
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>gb|AF296091.1|AF296091 Porcine teschovirus strain PS 37 polyprotein gene, complete cds
          Length = 7018

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 tgtcatcccaagaatcaaat 207
           ||||||||||||||||||||
Sbjct: 708 tgtcatcccaagaatcaaat 727
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>gb|AC146074.4| Pan troglodytes BAC clone RP43-15D8 from chromosome 7, complete sequence
          Length = 196799

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 207    tttcactttgaaatgttacataaataat 234
              |||| ||||||||||| |||||||||||
Sbjct: 180873 tttccctttgaaatgtcacataaataat 180846
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>emb|AL357615.7|HS373D10 Homo sapiens chromosome 9 BAC RP11-373D10, complete sequence
          Length = 171446

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   aaatgttacataaataatag 236
             ||||||||||||||||||||
Sbjct: 55753 aaatgttacataaataatag 55734
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     tcaattacctccacttgtct 335
               ||||||||||||||||||||
Sbjct: 1655722 tcaattacctccacttgtct 1655741
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>emb|AL391667.19| Human DNA sequence from clone RP11-214L15 on chromosome 9, complete
             sequence
          Length = 110444

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   aaatgttacataaataatag 236
             ||||||||||||||||||||
Sbjct: 23070 aaatgttacataaataatag 23051


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,734,770
Number of Sequences: 3902068
Number of extensions: 3734770
Number of successful extensions: 85131
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84993
Number of HSP's gapped (non-prelim): 138
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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