Clone Name | rbastl19g02 |
---|---|
Clone Library Name | barley_pub |
>PLSX_PROMM (Q7V4F7) Fatty acid/phospholipid synthesis protein plsX| Length = 448 Score = 34.7 bits (78), Expect = 0.060 Identities = 17/54 (31%), Positives = 33/54 (61%) Frame = +1 Query: 124 KPQS*HRKHVWKKKSAQV*HLSGGACNSCSYSGNVSAILSIRSSGKICAGRGAV 285 +P++ R +W +++A V L G A NS S +GNV+ + + S+G + + G++ Sbjct: 20 RPRAIRRLVIWYRRNAAVTSLVGSATNSASAAGNVAGTV-VSSAGSVVSNAGSM 72
>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)| Length = 1805 Score = 31.6 bits (70), Expect = 0.51 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +3 Query: 60 IHEHKEQAEYLKQTTNKIEIMKAPKLT*KTCLEKKICTSLTPKW 191 I E +E+ E L++ ++ E MKAP+L K +K+ LT W Sbjct: 367 IRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTW 410
>PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX| Length = 436 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/54 (27%), Positives = 32/54 (59%) Frame = +1 Query: 124 KPQS*HRKHVWKKKSAQV*HLSGGACNSCSYSGNVSAILSIRSSGKICAGRGAV 285 +P++ R +W ++++ V L A NS S +GNV+ + + S+G + + G++ Sbjct: 11 RPKAIRRLVIWYRRNSAVTTLVDTATNSASAAGNVAGSV-VSSAGSVVSSAGSI 63
>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)| (NFATc3) (T cell transcription factor NFAT4) (NF-AT4) (NFATx) Length = 1075 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +2 Query: 203 TAAHIQEMFLQFSQLGHLAKSALGGVQYISE--SRKEPLVLCPFHPGN 340 T H+Q M S G A S+ Q + S +P+ CP HPG+ Sbjct: 874 TPPHLQSMGYHCSNAGQTALSSPVADQITGQPSSHLQPITYCPSHPGS 921
>RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Uncoordinated| protein 10) Length = 1563 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/56 (21%), Positives = 27/56 (48%) Frame = +2 Query: 14 HQKGGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSN 181 HQ+ + P +A + +++++ N+Q N++ N N G +N ++N Sbjct: 238 HQQNNRRAMQQQPMSQNQANQINQMNQNQNQQQSHNQNMTQNQRNQTGPQNQQRTN 293
>NIN_HUMAN (Q8N4C6) Ninein (hNinein)| Length = 2090 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 48 VHHFIHEHKEQAEYLKQTTNKIEIMKAPKL 137 VHH I E K++ +YL+ T +E +KA ++ Sbjct: 1380 VHHVIEECKQENQYLEGNTQLLEKVKAHEI 1409
>MYX2_CROVC (P12029) Myotoxin-2 (Myotoxin II)| Length = 43 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -1 Query: 321 HKTSGSFLDSEIYCTPPSADFAR 253 HK G E CTPPS+DF + Sbjct: 5 HKKGGHCFPKEKICTPPSSDFGK 27
>OSBL6_HUMAN (Q9BZF3) Oxysterol-binding protein-related protein 6 (OSBP-related| protein 6) (ORP-6) Length = 934 Score = 28.1 bits (61), Expect = 5.6 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 225 CFCNSLN*VIWQNLRWE 275 C C S N V WQ++RW+ Sbjct: 681 CHCESKNFVFWQDIRWK 697
>TPMT_FRATT (Q5NEH3) Thiopurine S-methyltransferase (EC 2.1.1.67) (Thiopurine| methyltransferase) Length = 226 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%) Frame = -3 Query: 262 FCQMT*LRELQKHF----LNMSSCCMLPHLGVRLVQIFF 158 FCQ + L KHF +N SS C++P G + +FF Sbjct: 23 FCQESPNEFLVKHFSKLNINDSSVCLIPMCGCSIDMLFF 61
>YWV1_CAEEL (Q11075) Hypothetical protein B0403.1| Length = 198 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 160 FSKHVFYVSFGAFIISILFVVCFRYSACSL 71 F KH+ YVS AF+ + CFR++ SL Sbjct: 23 FQKHIEYVSNSAFLKCRQLLRCFRFTNVSL 52
>PDR10_ARATH (Q7PC85) Probable pleiotropic drug resistance protein 10| Length = 1418 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/71 (23%), Positives = 33/71 (46%) Frame = -3 Query: 229 KHFLNMSSCCMLPHLGVRLVQIFFSKHVFYVSFGAFIISILFVVCFRYSACSLCSCMK*W 50 KH+L ++ C + + R + HV + G +++++++ F S K W Sbjct: 632 KHYLVLALCGQMSYGLFRCIAAVTRNHVVSNTMGC--LAVMWLMTFSGYVLSRNQVHK-W 688 Query: 49 TTMYYWDSPLL 17 T YW SP++ Sbjct: 689 LTWAYWTSPMM 699
>OSBL6_MOUSE (Q8BXR9) Oxysterol-binding protein-related protein 6 (OSBP-related| protein 6) (ORP-6) Length = 959 Score = 28.1 bits (61), Expect = 5.6 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 225 CFCNSLN*VIWQNLRWE 275 C C S N V WQ++RW+ Sbjct: 706 CHCESKNFVFWQDIRWK 722
>RNH2_PROMA (Q7VA11) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 191 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -2 Query: 281 APLPAQILPDDLIERIAETFPEY 213 A + A++ DDLI+R+AE +P+Y Sbjct: 134 ASVLAKVARDDLIKRMAEKYPQY 156
>OTC_BUCBP (Q89AG1) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)| Length = 339 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +2 Query: 2 IFFIHQKGGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDN 121 + + Q I V+HC PSFH + T + NK N DN Sbjct: 260 MLLLTQNKKIKVLHCLPSFHDK--NTIVGEEIINKHNLDN 297
>E2AK2_SCHPO (Q9UTE5) Eukaryotic translation initiation factor 2-alpha kinase 2| (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Heme-regulated inhibitor 2) Length = 639 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +2 Query: 77 TSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSN 181 T + T+ K + + + +N EN+ +NLH SN Sbjct: 294 TESIISTSRKSSYSSTTESSNFENLESPRNLHDSN 328
>AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment)| Length = 864 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = +2 Query: 29 IPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSNT*VGEHATA 208 IP + SPS +TS+ SK + R +ESP KK +S+T +++ Sbjct: 610 IPAVIPSPSHKPSKTKTSKSSKVKDLSTRSDESPS-------NKKRKPQSSTSSSSSSSS 662 Query: 209 AHIQ 220 + +Q Sbjct: 663 SSLQ 666
>KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like protein)| Length = 1044 Score = 27.3 bits (59), Expect = 9.6 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 Query: 46 TMYYWDSPLLVDEKY 2 T+Y+WD PL + EKY Sbjct: 192 TLYHWDLPLALQEKY 206
>IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2| Length = 945 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = -2 Query: 341 GSLDEMDIKQVVLSLIQKYTAPLPAQILPDDLIERIAETFPEYEQLLHAPP 189 GSL+ I++ L P P P++++E +AE PE E + P Sbjct: 106 GSLESAQIEEETAGLPMGEIEPTPE---PENIVEPVAEAIPEPEPVREPEP 153
>VINT_LAMBD (P03700) Integrase| Length = 356 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +2 Query: 203 TAAHIQEMFLQFSQLGHLAKSALGGVQYISESRKEPL 313 TA HI + + + K LGG I+ +R+EPL Sbjct: 244 TALHIDALGISMKETLDKCKEILGGETIIASTRREPL 280
>TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor repeat associator| with PCTAIRE 2) (Trap) Length = 1098 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -2 Query: 323 DIKQVVLSLIQKYTAPLPAQILPDDLIERIAETFPE 216 D K+ V L+ KYT+ L A LP E FPE Sbjct: 340 DFKEKVADLLVKYTSGLWASALPKAFEEMYKVKFPE 375 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,075,147 Number of Sequences: 219361 Number of extensions: 933745 Number of successful extensions: 3012 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2933 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3010 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)