ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLSX_PROMM (Q7V4F7) Fatty acid/phospholipid synthesis protein plsX 35 0.060
2KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like p... 32 0.51
3PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX 30 1.5
4NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytopl... 29 3.3
5RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Unco... 28 4.3
6NIN_HUMAN (Q8N4C6) Ninein (hNinein) 28 4.3
7MYX2_CROVC (P12029) Myotoxin-2 (Myotoxin II) 28 4.3
8OSBL6_HUMAN (Q9BZF3) Oxysterol-binding protein-related protein 6... 28 5.6
9TPMT_FRATT (Q5NEH3) Thiopurine S-methyltransferase (EC 2.1.1.67)... 28 5.6
10YWV1_CAEEL (Q11075) Hypothetical protein B0403.1 28 5.6
11PDR10_ARATH (Q7PC85) Probable pleiotropic drug resistance protei... 28 5.6
12OSBL6_MOUSE (Q8BXR9) Oxysterol-binding protein-related protein 6... 28 5.6
13RNH2_PROMA (Q7VA11) Ribonuclease HII (EC 3.1.26.4) (RNase HII) 28 7.3
14OTC_BUCBP (Q89AG1) Ornithine carbamoyltransferase (EC 2.1.3.3) (... 28 7.3
15E2AK2_SCHPO (Q9UTE5) Eukaryotic translation initiation factor 2-... 28 7.3
16AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment) 28 7.3
17KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like ... 27 9.6
18IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2 27 9.6
19VINT_LAMBD (P03700) Integrase 27 9.6
20TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor re... 27 9.6

>PLSX_PROMM (Q7V4F7) Fatty acid/phospholipid synthesis protein plsX|
          Length = 448

 Score = 34.7 bits (78), Expect = 0.060
 Identities = 17/54 (31%), Positives = 33/54 (61%)
 Frame = +1

Query: 124 KPQS*HRKHVWKKKSAQV*HLSGGACNSCSYSGNVSAILSIRSSGKICAGRGAV 285
           +P++  R  +W +++A V  L G A NS S +GNV+  + + S+G + +  G++
Sbjct: 20  RPRAIRRLVIWYRRNAAVTSLVGSATNSASAAGNVAGTV-VSSAGSVVSNAGSM 72



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>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)|
          Length = 1805

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 60  IHEHKEQAEYLKQTTNKIEIMKAPKLT*KTCLEKKICTSLTPKW 191
           I E +E+ E L++  ++ E MKAP+L  K    +K+   LT  W
Sbjct: 367 IRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTW 410



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>PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX|
          Length = 436

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = +1

Query: 124 KPQS*HRKHVWKKKSAQV*HLSGGACNSCSYSGNVSAILSIRSSGKICAGRGAV 285
           +P++  R  +W ++++ V  L   A NS S +GNV+  + + S+G + +  G++
Sbjct: 11  RPKAIRRLVIWYRRNSAVTTLVDTATNSASAAGNVAGSV-VSSAGSVVSSAGSI 63



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>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)|
            (NFATc3) (T cell transcription factor NFAT4) (NF-AT4)
            (NFATx)
          Length = 1075

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 203  TAAHIQEMFLQFSQLGHLAKSALGGVQYISE--SRKEPLVLCPFHPGN 340
            T  H+Q M    S  G  A S+    Q   +  S  +P+  CP HPG+
Sbjct: 874  TPPHLQSMGYHCSNAGQTALSSPVADQITGQPSSHLQPITYCPSHPGS 921



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>RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Uncoordinated|
           protein 10)
          Length = 1563

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +2

Query: 14  HQKGGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSN 181
           HQ+     +   P    +A + +++++  N+Q   N++   N  N  G +N  ++N
Sbjct: 238 HQQNNRRAMQQQPMSQNQANQINQMNQNQNQQQSHNQNMTQNQRNQTGPQNQQRTN 293



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>NIN_HUMAN (Q8N4C6) Ninein (hNinein)|
          Length = 2090

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 48   VHHFIHEHKEQAEYLKQTTNKIEIMKAPKL 137
            VHH I E K++ +YL+  T  +E +KA ++
Sbjct: 1380 VHHVIEECKQENQYLEGNTQLLEKVKAHEI 1409



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>MYX2_CROVC (P12029) Myotoxin-2 (Myotoxin II)|
          Length = 43

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 321 HKTSGSFLDSEIYCTPPSADFAR 253
           HK  G     E  CTPPS+DF +
Sbjct: 5   HKKGGHCFPKEKICTPPSSDFGK 27



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>OSBL6_HUMAN (Q9BZF3) Oxysterol-binding protein-related protein 6 (OSBP-related|
           protein 6) (ORP-6)
          Length = 934

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 225 CFCNSLN*VIWQNLRWE 275
           C C S N V WQ++RW+
Sbjct: 681 CHCESKNFVFWQDIRWK 697



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>TPMT_FRATT (Q5NEH3) Thiopurine S-methyltransferase (EC 2.1.1.67) (Thiopurine|
           methyltransferase)
          Length = 226

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 262 FCQMT*LRELQKHF----LNMSSCCMLPHLGVRLVQIFF 158
           FCQ +    L KHF    +N SS C++P  G  +  +FF
Sbjct: 23  FCQESPNEFLVKHFSKLNINDSSVCLIPMCGCSIDMLFF 61



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>YWV1_CAEEL (Q11075) Hypothetical protein B0403.1|
          Length = 198

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 160 FSKHVFYVSFGAFIISILFVVCFRYSACSL 71
           F KH+ YVS  AF+     + CFR++  SL
Sbjct: 23  FQKHIEYVSNSAFLKCRQLLRCFRFTNVSL 52



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>PDR10_ARATH (Q7PC85) Probable pleiotropic drug resistance protein 10|
          Length = 1418

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = -3

Query: 229 KHFLNMSSCCMLPHLGVRLVQIFFSKHVFYVSFGAFIISILFVVCFRYSACSLCSCMK*W 50
           KH+L ++ C  + +   R +      HV   + G   +++++++ F     S     K W
Sbjct: 632 KHYLVLALCGQMSYGLFRCIAAVTRNHVVSNTMGC--LAVMWLMTFSGYVLSRNQVHK-W 688

Query: 49  TTMYYWDSPLL 17
            T  YW SP++
Sbjct: 689 LTWAYWTSPMM 699



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>OSBL6_MOUSE (Q8BXR9) Oxysterol-binding protein-related protein 6 (OSBP-related|
           protein 6) (ORP-6)
          Length = 959

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 225 CFCNSLN*VIWQNLRWE 275
           C C S N V WQ++RW+
Sbjct: 706 CHCESKNFVFWQDIRWK 722



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>RNH2_PROMA (Q7VA11) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 191

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 281 APLPAQILPDDLIERIAETFPEY 213
           A + A++  DDLI+R+AE +P+Y
Sbjct: 134 ASVLAKVARDDLIKRMAEKYPQY 156



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>OTC_BUCBP (Q89AG1) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)|
          Length = 339

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 2   IFFIHQKGGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDN 121
           +  + Q   I V+HC PSFH +   T    +  NK N DN
Sbjct: 260 MLLLTQNKKIKVLHCLPSFHDK--NTIVGEEIINKHNLDN 297



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>E2AK2_SCHPO (Q9UTE5) Eukaryotic translation initiation factor 2-alpha kinase 2|
           (EC 2.7.11.1) (Heme-regulated eukaryotic initiation
           factor eIF-2-alpha kinase) (Heme-regulated inhibitor 2)
          Length = 639

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 77  TSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSN 181
           T  +  T+ K +  + +  +N EN+   +NLH SN
Sbjct: 294 TESIISTSRKSSYSSTTESSNFENLESPRNLHDSN 328



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>AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment)|
          Length = 864

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +2

Query: 29  IPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSNT*VGEHATA 208
           IP +  SPS      +TS+ SK  +   R +ESP         KK   +S+T     +++
Sbjct: 610 IPAVIPSPSHKPSKTKTSKSSKVKDLSTRSDESPS-------NKKRKPQSSTSSSSSSSS 662

Query: 209 AHIQ 220
           + +Q
Sbjct: 663 SSLQ 666



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>KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like protein)|
          Length = 1044

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 46  TMYYWDSPLLVDEKY 2
           T+Y+WD PL + EKY
Sbjct: 192 TLYHWDLPLALQEKY 206



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>IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2|
          Length = 945

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -2

Query: 341 GSLDEMDIKQVVLSLIQKYTAPLPAQILPDDLIERIAETFPEYEQLLHAPP 189
           GSL+   I++    L      P P    P++++E +AE  PE E +    P
Sbjct: 106 GSLESAQIEEETAGLPMGEIEPTPE---PENIVEPVAEAIPEPEPVREPEP 153



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>VINT_LAMBD (P03700) Integrase|
          Length = 356

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 203 TAAHIQEMFLQFSQLGHLAKSALGGVQYISESRKEPL 313
           TA HI  + +   +     K  LGG   I+ +R+EPL
Sbjct: 244 TALHIDALGISMKETLDKCKEILGGETIIASTRREPL 280



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>TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1098

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 323 DIKQVVLSLIQKYTAPLPAQILPDDLIERIAETFPE 216
           D K+ V  L+ KYT+ L A  LP    E     FPE
Sbjct: 340 DFKEKVADLLVKYTSGLWASALPKAFEEMYKVKFPE 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,075,147
Number of Sequences: 219361
Number of extensions: 933745
Number of successful extensions: 3012
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3010
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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