>CDK7_MOUSE (Q03147) Cell division protein kinase 7 (EC 2.7.11.22) (EC|
           2.7.11.23) (CDK-activating kinase) (CAK) (TFIIH basal
           transcription factor complex kinase subunit) (39 kDa
           protein kinase) (P39 Mo15) (Protein-tyrosine kinase
           MPK-7) (CR4 protein kinas
          Length = 346

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
 Frame = +3

Query: 108 EDLFKMNTCFITT------TKLPPSRPAPTPGMEMP 197
           + LF  N C  TT      TK   +RP PTPG ++P
Sbjct: 273 QGLFLFNPCTRTTASQALKTKYFSNRPGPTPGCQLP 308

>HUWE1_HUMAN (Q7Z6Z7) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)|
            (E3 ubiquitin protein ligase URE-B1) (Mcl-1 ubiquitin
            ligase E3) (Mule) (ARF-binding protein 1) (ARF-BP1)
          Length = 4374

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 12   RLKKILEIATSSNMFL-AQSNVHQALPI*STTTEDLFKMNTCFITTTKLPPSRPAPTPGM 188
            RL  ++ IA   N    AQ+N        +T T       T   +TT  PP+  APTP  
Sbjct: 3455 RLLSLISIALPENKVSEAQANSGSGASSTTTATSTTSTTTTTAASTTPTPPT--APTPVT 3512

Query: 189  EMPAL 203
              PAL
Sbjct: 3513 SAPAL 3517

>INX10_CAEEL (Q22549) Innexin-10|
          Length = 559

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +2

Query: 17  KKNTRNCYQFKYVFSTKQCTPGSTNLIHHN*RFVQNEHMFHNHNQTPPKSTCAHAR 184
           K+N +N  Q  Y ++ +  TP      + N   +QN++ + N+ +TP  S    +R
Sbjct: 490 KQNQQNATQPPYCYTNQNPTP------YQNQNQIQNQNQYSNYYRTPSLSRGTDSR 539


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,241,107
Number of Sequences: 219361
Number of extensions: 749632
Number of successful extensions: 2272
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2269
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)