>ref|XM_450082.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 546

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 109 gcaagggtatacgtttatccttgaaggaagctcaata 145
           ||||||||||| |||||||||||||||| ||||||||
Sbjct: 39  gcaagggtatatgtttatccttgaaggaggctcaata 75

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
             complete genome
          Length = 491515

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 109   gcaagggtatacgtttatccttgaaggaagctcaata 145
             ||||||||||| |||||||||||||||| ||||||||
Sbjct: 56463 gcaagggtatatgtttatccttgaaggaggctcaata 56499

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
             complete genome
          Length = 490673

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 109   gcaagggtatacgtttatccttgaaggaagctcaata 145
             ||||||||||| |||||||||||||||| ||||||||
Sbjct: 55968 gcaagggtatatgtttatccttgaaggaggctcaata 56004

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare
             mitochondrion, complete genome
          Length = 490669

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 109   gcaagggtatacgtttatccttgaaggaagctcaata 145
             ||||||||||| |||||||||||||||| ||||||||
Sbjct: 55968 gcaagggtatatgtttatccttgaaggaggctcaata 56004

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 109      gcaagggtatacgtttatccttgaaggaagctcaata 145
                ||||||||||| |||||||||||||||| ||||||||
Sbjct: 20578999 gcaagggtatatgtttatccttgaaggaggctcaata 20578963

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                    
Query: 109     gcaagggtatacgtttatccttgaaggaagctcaata 145
               ||||||||||| |||||||||||||||| ||||||||
Sbjct: 1477681 gcaagggtatatgtttatccttgaaggaggctcaata 1477645

>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1512_E04
          Length = 157848

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 109   gcaagggtatacgtttatccttgaaggaagctcaata 145
             ||||||||||| |||||||||||||||| ||||||||
Sbjct: 95794 gcaagggtatatgtttatccttgaaggaggctcaata 95758

>dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBa0018I03
          Length = 145818

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 109  gcaagggtatacgtttatccttgaaggaagctcaata 145
            ||||||||||| |||||||||||||||| ||||||||
Sbjct: 5925 gcaagggtatatgtttatccttgaaggaggctcaata 5889

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 109      gcaagggtatacgtttatccttgaaggaagctcaata 145
                ||||||||||| |||||||||||||||| ||||||||
Sbjct: 20505213 gcaagggtatatgtttatccttgaaggaggctcaata 20505177

>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143618

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 109   gcaagggtatacgtttatccttgaaggaagctcaata 145
             ||||||||||| |||||||||||||||| ||||||||
Sbjct: 14234 gcaagggtatatgtttatccttgaaggaggctcaata 14270

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete
             genome
          Length = 490520

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 109   gcaagggtatacgtttatccttgaaggaagctcaata 145
             ||||||||||| |||||||||||||||| ||||||||
Sbjct: 55918 gcaagggtatatgtttatccttgaaggaggctcaata 55954

>gb|AC148293.6| Medicago truncatula clone mth2-16c13, complete sequence
          Length = 117793

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 29    tagataaa-ctgagacatgtagtatatag 56
             |||||||| ||||||||||||||||||||
Sbjct: 81015 tagataaagctgagacatgtagtatatag 80987

>gb|AC134468.4| Mus musculus BAC clone RP23-97J21 from chromosome 12, complete sequence
          Length = 234400

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    acctgggtcagatggttttt 294
              ||||||||||||||||||||
Sbjct: 121048 acctgggtcagatggttttt 121067

>gb|AC124084.8| Mus musculus chromosome 15, clone RP24-410P21, complete sequence
          Length = 183447

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 200    atcagacaagtcagccttgatggg 223
              ||||||||||||||||||| ||||
Sbjct: 121652 atcagacaagtcagccttgttggg 121675

>emb|CT009738.8| Mouse DNA sequence from clone RP23-217H9 on chromosome 12, complete
              sequence
          Length = 209619

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    tcagagcagcaacacctggg 281
              ||||||||||||||||||||
Sbjct: 133612 tcagagcagcaacacctggg 133631

>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence
          Length = 209280

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    tcagagcagcaacacctggg 281
              ||||||||||||||||||||
Sbjct: 203291 tcagagcagcaacacctggg 203310

>dbj|AK034808.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430041K17 product:unclassifiable, full insert
           sequence
          Length = 3180

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 tcagagcagcaacacctggg 281
           ||||||||||||||||||||
Sbjct: 27  tcagagcagcaacacctggg 46

>gb|AC025271.7|AC025271 Homo sapiens chromosome 15 clone CTD-2515H24 map 15q21.3, complete
              sequence
          Length = 191330

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     cttagataaactgagacatg 46
              ||||||||||||||||||||
Sbjct: 174237 cttagataaactgagacatg 174218

>gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, complete sequence
          Length = 207974

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   atcagacaagtcagccttgatggg 223
             ||||||||||||||||||| ||||
Sbjct: 26010 atcagacaagtcagccttgttggg 25987

>emb|BX000437.7| Zebrafish DNA sequence from clone DKEY-106O5 in linkage group 5,
             complete sequence
          Length = 178961

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ttaacagctgcgcttgtatt 346
             ||||||||||||||||||||
Sbjct: 25922 ttaacagctgcgcttgtatt 25941

>gb|AC138112.4| Mus musculus BAC clone RP24-291E8 from 3, complete sequence
          Length = 173988

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    ataaactgagacatgtagta 51
             ||||||||||||||||||||
Sbjct: 80502 ataaactgagacatgtagta 80521


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,674,223
Number of Sequences: 3902068
Number of extensions: 2674223
Number of successful extensions: 45061
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44980
Number of HSP's gapped (non-prelim): 81
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)