>ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA
          Length = 3214

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 343  acctgctcaggctcaccatgcgtgcacccccatcacctc 381
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2961 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2923

>ref|XM_476451.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3207

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 343  acctgctcaggctcaccatgcgtgcacccccatcacctc 381
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2954 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2916

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 343     acctgctcaggctcaccatgcgtgcacccccatcacctc 381
               ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 1277464 acctgttcaggctcaccatgcgtgcaccaccatcacctc 1277426

>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 343   acctgctcaggctcaccatgcgtgcacccccatcacctc 381
             ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 42299 acctgttcaggctcaccatgcgtgcaccaccatcacctc 42261

>dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147D18, full
            insert sequence
          Length = 3206

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 343  acctgctcaggctcaccatgcgtgcacccccatcacctc 381
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2953 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2915

>dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060K11, full
            insert sequence
          Length = 3214

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 343  acctgctcaggctcaccatgcgtgcacccccatcacctc 381
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2961 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2923

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 344     cctgctcaggctcaccatgcgtgcacccccatcacctc 381
               |||| |||||||||||||||||||||| ||||||||||
Sbjct: 1222713 cctgttcaggctcaccatgcgtgcaccgccatcacctc 1222676

>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 344   cctgctcaggctcaccatgcgtgcacccccatcacctc 381
             |||| |||||||||||||||||||||| ||||||||||
Sbjct: 53804 cctgttcaggctcaccatgcgtgcaccgccatcacctc 53767

>gb|BT018635.1| Zea mays clone EL01N0504B06.d mRNA sequence
          Length = 1657

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 344  cctgctcaggctcaccatgcgtgcacccccatcacc 379
            |||| ||||| |||||||||||||||| ||||||||
Sbjct: 1385 cctgttcaggttcaccatgcgtgcaccaccatcacc 1350

>gb|AY109680.1| Zea mays CL17699_1 mRNA sequence
          Length = 1483

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 344  cctgctcaggctcaccatgcgtgcacccccatcacc 379
            |||| ||||| |||||||||||||||| ||||||||
Sbjct: 1190 cctgttcaggttcaccatgcgtgcaccaccatcacc 1155

>emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in linkage group 23,
              complete sequence
          Length = 110120

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 172    cagattcagatcagaaaactcaattt 197
              |||| |||||||||||||||||||||
Sbjct: 105581 cagaatcagatcagaaaactcaattt 105606

>ref|NM_131386.1| Danio rerio DNA (cytosine-5-)-methyltransferase 3 (dnmt3), mRNA
          Length = 4882

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 172  cagattcagatcagaaaactcaattt 197
            |||| |||||||||||||||||||||
Sbjct: 1225 cagaatcagatcagaaaactcaattt 1200

>dbj|AB196914.1| Danio rerio dnmt3 mRNA for DNA methyltransferase, complete cds
          Length = 4882

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 172  cagattcagatcagaaaactcaattt 197
            |||| |||||||||||||||||||||
Sbjct: 1225 cagaatcagatcagaaaactcaattt 1200

>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 332   ttctaatctctacctgctcaggctc 356
             ||||| |||||||||||||||||||
Sbjct: 72913 ttctattctctacctgctcaggctc 72937

>gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome 9, complete sequence
          Length = 222617

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 332    ttctaatctctacctgctcaggctc 356
              ||||| |||||||||||||||||||
Sbjct: 193207 ttctattctctacctgctcaggctc 193183

>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence
          Length = 108164

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   cagaaaactcaatttgagttt 203
             |||||||||||||||||||||
Sbjct: 65393 cagaaaactcaatttgagttt 65373

>gb|AC027333.5| Homo sapiens chromosome 5 clone CTD-2194F12, complete sequence
          Length = 180529

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 230   tttctaatttatggaagaaaa 250
             |||||||||||||||||||||
Sbjct: 91889 tttctaatttatggaagaaaa 91909

>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence
          Length = 203241

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 234    taatttatggaagaaaactag 254
              |||||||||||||||||||||
Sbjct: 202315 taatttatggaagaaaactag 202295

>emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-873E2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209512

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 230    tttctaatttatggaagaaaa 250
              |||||||||||||||||||||
Sbjct: 160361 tttctaatttatggaagaaaa 160381

>gb|AC161269.4| Mus musculus BAC clone RP23-120K16 from chromosome 15, complete
             sequence
          Length = 206234

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   atttgagtttcctgacaggt 213
             ||||||||||||||||||||
Sbjct: 44931 atttgagtttcctgacaggt 44912

>gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, complete sequence
          Length = 184557

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   gaaaactcaatttgagtttc 204
             ||||||||||||||||||||
Sbjct: 23022 gaaaactcaatttgagtttc 23003

>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence
          Length = 222810

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 223    tggaggatttctaatttatggaagaaaa 250
              ||||||||||||||||||  ||||||||
Sbjct: 154073 tggaggatttctaatttacagaagaaaa 154046

>emb|AL592105.14| Zebrafish DNA sequence from clone BUSM1-150L22 in linkage group 7
             Contains the 3' part of the men1 gene (multiple endocrine
             neoplasia type 1 (menin 1)), a gene for a novel protein
             kinase, three genes for novel immune-type receptor, a
             novel immune-type receptor pseudogene, the nitr4.2,
             nitr5.3 and nitr1.23 genes (novel immune-type receptor
             4.2, 5.3 and 1.23), a novel gene and a CpG island,
             complete sequence
          Length = 106023

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 197   tgagtttcctgacaggttcagaac 220
             |||||||| |||||||||||||||
Sbjct: 76888 tgagtttcgtgacaggttcagaac 76911

>emb|AL591382.3| Zebrafish DNA sequence from clone BUSM1-105L16 in linkage group 7
            Contains the nitr2d_1 gene for novel immune-type receptor
            2d, allele 1, the nitr1o_3 gene for novel immune-type
            receptor 1o, allele 3, the nitr1m_2 gene for novel
            immune-type receptor 1m, allele 2, the nitr1l_2 gene for
            novel immune-type receptor 1l, allele 2, a novel
            immune-type receptor 1 pseudogene, the nitr5_4 gene for
            novel immune-type receptor 5, allele 4, the nitr4a_2 gene
            for novel immune-type receptor 4a, allele 2, the nitr1i_2
            gene for novel immune-type receptor 1i, allele 2, the
            nitr1j_1 gene for novel immune-type receptor 1j, allele
            1, the nitr1g_1 gene for novel immune-type receptor 1g,
            allele 1, a novel immune-type receptor 4b pseudogene, a
            novel gene, the nitr1k_3 gene for novel immune-type
            receptor 1k, allele 3 and a CpG island, complete sequence
          Length = 98934

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  tgagtttcctgacaggttcagaac 220
            |||||||| |||||||||||||||
Sbjct: 4038 tgagtttcgtgacaggttcagaac 4061

>emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 in linkage group 16,
              complete sequence
          Length = 161708

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    ttctaatctctacctgctca 351
              ||||||||||||||||||||
Sbjct: 114488 ttctaatctctacctgctca 114507

>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     tttttcctaatggagtgctt 288
               ||||||||||||||||||||
Sbjct: 1591956 tttttcctaatggagtgctt 1591937

>gb|AC100840.2| Homo sapiens chromosome 15, clone RP11-537K8, complete sequence
          Length = 174287

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   atcagaaaactcaatttgag 200
             ||||||||||||||||||||
Sbjct: 99453 atcagaaaactcaatttgag 99434

>gb|AC090257.5| Homo sapiens chromosome 15, clone RP11-301A18, complete sequence
          Length = 159299

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aaacctttttgtcaaatgta 77
             ||||||||||||||||||||
Sbjct: 35717 aaacctttttgtcaaatgta 35736

>gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, complete sequence
          Length = 168252

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     aaacctttttgtcaaatgta 77
              ||||||||||||||||||||
Sbjct: 155125 aaacctttttgtcaaatgta 155144

>gb|AC021541.7| Homo sapiens chromosome 15, clone RP11-505L16, complete sequence
          Length = 194023

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    atcagaaaactcaatttgag 200
              ||||||||||||||||||||
Sbjct: 169250 atcagaaaactcaatttgag 169269

>gb|AC154841.2| Mus musculus BAC clone RP23-61I24 from chromosome 14, complete sequence
          Length = 211666

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    caatgcaaaacagaaaactc 124
              ||||||||||||||||||||
Sbjct: 144227 caatgcaaaacagaaaactc 144208

>gb|AC018787.5|AC018787 Homo sapiens, clone RP11-22O12, complete sequence
          Length = 90722

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aaacctttttgtcaaatgta 77
             ||||||||||||||||||||
Sbjct: 41736 aaacctttttgtcaaatgta 41755

>emb|CR352703.1| Gallus gallus finished cDNA, clone ChEST39m24
          Length = 1331

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  ggaagaaaactagtgcctca 261
            ||||||||||||||||||||
Sbjct: 1022 ggaagaaaactagtgcctca 1041

>gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, complete sequence
          Length = 208801

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    atttgagtttcctgacaggt 213
              ||||||||||||||||||||
Sbjct: 149367 atttgagtttcctgacaggt 149348

>emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 in linkage group 16,
              complete sequence
          Length = 205755

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    ttctaatctctacctgctca 351
              ||||||||||||||||||||
Sbjct: 156039 ttctaatctctacctgctca 156058


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,001,550
Number of Sequences: 3902068
Number of extensions: 4001550
Number of successful extensions: 73460
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73354
Number of HSP's gapped (non-prelim): 106
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)