ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl19e11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 751 bits (379), Expect = 0.0 Identities = 382/383 (99%) Strand = Plus / Minus Query: 1 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1228 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 1169 Query: 61 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 1109 Query: 121 ccatggttgccgatggcttaaattaaatggagatgctgttggggatgcccttggcggtaa 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1108 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 1049 Query: 181 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 989 Query: 241 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 929 Query: 301 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccgagg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccgagg 869 Query: 361 tccactccggcgtgtcccgctgc 383 ||||||||||||||||||||||| Sbjct: 868 tccactccggcgtgtcccgctgc 846
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 743 bits (375), Expect = 0.0 Identities = 381/383 (99%) Strand = Plus / Minus Query: 1 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740 Query: 61 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680 Query: 121 ccatggttgccgatggcttaaattaaatggagatgctgttggggatgcccttggcggtaa 180 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620 Query: 181 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2619 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 2560 Query: 241 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2559 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 2500 Query: 301 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccgagg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2499 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccgagg 2440 Query: 361 tccactccggcgtgtcccgctgc 383 ||||||||||||||||||||||| Sbjct: 2439 tccactccggcgtgtcccgctgc 2417
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 335 bits (169), Expect = 6e-89 Identities = 220/237 (92%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 749 atggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgatcg 690 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 689 gaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggttcaacagc 630 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 629 tgcgggtcgtggttcatgcccaccaccttgctctcgatctccactagccgctcgctgaac 570 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 569 cgcttgaacacctccagggccttggggtccgaggtccactccggcgtgtcacgctgc 513
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 311 bits (157), Expect = 9e-82 Identities = 212/231 (91%) Strand = Plus / Plus Query: 153 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 |||||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1 atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60 Query: 213 ttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 272 || |||||||||||||||||||| | ||| |||||||||||||||||| |||| |||| Sbjct: 61 ttagggtagagcagcatgtaggggagcttggccgggccgttgcggttcaacagctgcggg 120 Query: 273 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 332 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 121 tcgtggttcatgcccaccaccttgctctcgatctccaccagccgctcrctgaaccgcttg 180 Query: 333 aacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 181 aacacctccagggccttggggtccgaggtccactccggcgtgtcgcgctgc 231
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 202 bits (102), Expect = 6e-49 Identities = 201/234 (85%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 2594 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 2535 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 2534 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 2475 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 2474 gcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgc 2415 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 |||| ||||||| ||| | | |||||| |||||| |||||||||| |||||| Sbjct: 2414 cggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctgc 2361
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 202 bits (102), Expect = 6e-49 Identities = 201/234 (85%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 47230 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 47171 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 47170 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 47111 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 47110 gcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgc 47051 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 |||| ||||||| ||| | | |||||| |||||| |||||||||| |||||| Sbjct: 47050 cggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctgc 46997 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 65746 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 65687 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 65686 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 65627 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 65626 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 65580 Score = 67.9 bits (34), Expect = 2e-08 Identities = 184/234 (78%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 |||||||| |||||||||||| |||| || | ||| |||| || ||||| | ||| || Sbjct: 6180 gagatgctattggggatgcccctggcagtgatcccctcagccgcccccttattgtctgac 6121 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||| | | ||| ||||||| || || || || ||| |||||||||||| Sbjct: 6120 gtgttggggaacatcagtgtgtaggggaaattggctggaccgacccggttcttgagcagg 6061 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| || ||| |||||||| |||||||||||| | |||||||| | Sbjct: 6060 gggtccttgttcatgttcaacactttgctctcaatctccaccagctgcctgctgaacctc 6001 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||| | ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 6000 ttgaatgcttccagtgccttggggtctgatgtccactctggcgtgtcacgctgc 5947 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 65812 atggagatgctgttggggatgcccatggcggtgagccc 65775
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 6e-49 Identities = 201/234 (85%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 27803100 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 27803041 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 27803040 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 27802981 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 27802980 gcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgc 27802921 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 |||| ||||||| ||| | | |||||| |||||| |||||||||| |||||| Sbjct: 27802920 cggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctgc 27802867 Score = 159 bits (80), Expect = 8e-36 Identities = 197/236 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30026445 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30026386 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| |||||||||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 30026385 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 30026326 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 30026325 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 30026266 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||||||||| ||||||| ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 30026265 cgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 30026210 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 27821616 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 27821557 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 27821556 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 27821497 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 27821496 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 27821450 Score = 67.9 bits (34), Expect = 2e-08 Identities = 184/234 (78%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 |||||||| |||||||||||| |||| || | ||| |||| || ||||| | ||| || Sbjct: 27762051 gagatgctattggggatgcccctggcagtgatcccctcagccgcccccttattgtctgac 27761992 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||| | | ||| ||||||| || || || || ||| |||||||||||| Sbjct: 27761991 gtgttggggaacatcagtgtgtaggggaaattggctggaccgacccggttcttgagcagg 27761932 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| || ||| |||||||| |||||||||||| | |||||||| | Sbjct: 27761931 gggtccttgttcatgttcaacactttgctctcaatctccaccagctgcctgctgaacctc 27761872 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||| | ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 27761871 ttgaatgcttccagtgccttggggtctgatgtccactctggcgtgtcacgctgc 27761818 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 27821682 atggagatgctgttggggatgcccatggcggtgagccc 27821645 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 145 aaatggagatgctgttggggatgccctt 172 |||||| ||||||||||||||||||||| Sbjct: 14300020 aaatggtgatgctgttggggatgccctt 14300047
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 6e-49 Identities = 201/234 (85%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 27894424 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 27894365 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 27894364 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 27894305 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 27894304 gcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgc 27894245 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 |||| ||||||| ||| | | |||||| |||||| |||||||||| |||||| Sbjct: 27894244 cggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctgc 27894191 Score = 159 bits (80), Expect = 8e-36 Identities = 197/236 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30117867 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30117808 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| |||||||||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 30117807 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 30117748 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 30117747 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 30117688 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||||||||| ||||||| ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 30117687 cgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 30117632 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 27912940 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 27912881 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 27912880 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 27912821 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 27912820 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 27912774 Score = 67.9 bits (34), Expect = 2e-08 Identities = 184/234 (78%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 |||||||| |||||||||||| |||| || | ||| |||| || ||||| | ||| || Sbjct: 27853374 gagatgctattggggatgcccctggcagtgatcccctcagccgcccccttattgtctgac 27853315 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||| | | ||| ||||||| || || || || ||| |||||||||||| Sbjct: 27853314 gtgttggggaacatcagtgtgtaggggaaattggctggaccgacccggttcttgagcagg 27853255 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| || ||| |||||||| |||||||||||| | |||||||| | Sbjct: 27853254 gggtccttgttcatgttcaacactttgctctcaatctccaccagctgcctgctgaacctc 27853195 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||| | ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 27853194 ttgaatgcttccagtgccttggggtctgatgtccactctggcgtgtcacgctgc 27853141 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 27913006 atggagatgctgttggggatgcccatggcggtgagccc 27912969 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 145 aaatggagatgctgttggggatgccctt 172 |||||| ||||||||||||||||||||| Sbjct: 14294995 aaatggtgatgctgttggggatgccctt 14295022
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 202 bits (102), Expect = 6e-49 Identities = 201/234 (85%) Strand = Plus / Plus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 10793 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 10852 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 10853 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 10912 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 10913 gcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgc 10972 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 |||| ||||||| ||| | | |||||| |||||| |||||||||| |||||| Sbjct: 10973 cggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctgc 11026 Score = 67.9 bits (34), Expect = 2e-08 Identities = 184/234 (78%) Strand = Plus / Plus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 |||||||| |||||||||||| |||| || | ||| |||| || ||||| | ||| || Sbjct: 51843 gagatgctattggggatgcccctggcagtgatcccctcagccgcccccttattgtctgac 51902 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||| | | ||| ||||||| || || || || ||| |||||||||||| Sbjct: 51903 gtgttggggaacatcagtgtgtaggggaaattggctggaccgacccggttcttgagcagg 51962 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| || ||| |||||||| |||||||||||| | |||||||| | Sbjct: 51963 gggtccttgttcatgttcaacactttgctctcaatctccaccagctgcctgctgaacctc 52022 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||| | ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 52023 ttgaatgcttccagtgccttggggtctgatgtccactctggcgtgtcacgctgc 52076
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 174 bits (88), Expect = 1e-40 Identities = 199/236 (84%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2060 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2001 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 2000 gaggtgttggggtagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 1941 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 1940 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 1881 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 | ||||||| || |||| ||| | ||| ||||||||||| || ||||| ||||| Sbjct: 1880 ctcttgaacgccgccagcgcccgggcgtcggaggtccactcgggggtgtcgcgctg 1825
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 167 bits (84), Expect = 3e-38 Identities = 198/236 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 4658 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 4599 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 4598 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 4539 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 4538 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 4479 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 | ||||||| || |||| ||| | ||| ||||||||||| || ||||| ||||| Sbjct: 4478 ctcttgaacgccgccagcgcccgggcgtcggaggtccactcgggggtgtcgcgctg 4423
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 167 bits (84), Expect = 3e-38 Identities = 198/236 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2591 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2532 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 2531 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 2472 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 2471 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 2412 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 | ||||||| || |||| ||| | ||| ||||||||||| || ||||| ||||| Sbjct: 2411 ctcttgaacgccgccagcgcccgggcgtcggaggtccactcgggggtgtcgcgctg 2356
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 159 bits (80), Expect = 8e-36 Identities = 197/236 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2609 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2550 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| |||||||||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2549 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2490 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2489 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2430 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||||||||| ||||||| ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 2429 cgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 2374
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 159 bits (80), Expect = 8e-36 Identities = 197/236 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2691 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2632 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| |||||||||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2631 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2572 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2571 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2512 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||||||||| ||||||| ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 2511 cgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 2456
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 159 bits (80), Expect = 8e-36 Identities = 197/236 (83%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 81306 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 81365 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| |||||||||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 81366 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 81425 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 81426 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 81485 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||||||||| ||||||| ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 81486 cgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 81541
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 159 bits (80), Expect = 8e-36 Identities = 197/236 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2724 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2665 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| |||||||||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2664 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2605 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2604 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2545 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||||||||| ||||||| ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 2544 cgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 2489
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 147 bits (74), Expect = 3e-32 Identities = 191/230 (83%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||||||||||||| |||| || ||||| | || |||| |||||||| Sbjct: 902 atggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggtcg 843 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||| Sbjct: 842 gaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttcttgagc 783 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 |||||| ||||||| ||||||||| ||||||| || |||||| | | |||| Sbjct: 782 cgcgggtccccgttcatggccaccacctgcttctcgatgccctccagcctcgccccgaac 723 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 ||| ||||| ||||| | ||||| | |||||| |||||| |||||||||| Sbjct: 722 cgcctgaacgcctcctgcgccttggcgtccgacgtccacgccggcgtgtc 673
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 129 bits (65), Expect = 7e-27 Identities = 107/121 (88%) Strand = Plus / Minus Query: 145 aaatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 |||||||||||||||| || |||||||||||||| | ||||| ||| ||||||| || Sbjct: 2620 aaatggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgt 2561 Query: 205 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 ||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| Sbjct: 2560 cggaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggttcttga 2501 Query: 265 g 265 | Sbjct: 2500 g 2500 Score = 46.1 bits (23), Expect = 0.083 Identities = 59/71 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 |||||||||| |||||| ||| ||||||||||||| ||||| | ||||| | ||||| Sbjct: 2467 tctcgatctcggtcagccgcgcgccgaaccgcttgaacgcctcctgcgccttggcgtccg 2408 Query: 358 aggtccactcc 368 | ||||||||| Sbjct: 2407 acgtccactcc 2397
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 123 bits (62), Expect = 4e-25 Identities = 188/230 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| |||||||| ||||||||| ||||||| ||||| | || ||| |||||||| Sbjct: 2654 atggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggtcg 2595 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| ||||||||||||||||| || ||||| ||||| ||| |||||||||| ||| Sbjct: 2594 gaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctttagc 2535 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||||| ||||||||| ||||||| || ||||| | | |||| Sbjct: 2534 tgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgccccgaac 2475 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 ||||||||| ||||||| ||||| | |||||| |||||| |||||||||| Sbjct: 2474 cgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtc 2425
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 792 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 733 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 732 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 673 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 672 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 613 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 612 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 557
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 119 bits (60), Expect = 7e-24 Identities = 192/236 (81%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgaga 668 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 ||||| ||||||| || ||| |||||||||||| |||||| | | |||| Sbjct: 667 cttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgccccgaac 608 Query: 327 cgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctg 382 ||| |||| ||||| | ||||| | |||||| ||||||||||||||||| ||||| Sbjct: 607 cgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 99.6 bits (50), Expect = 6e-18 Identities = 143/174 (82%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| |||||||||||||| | ||| | || ||||| |||||||||||| || Sbjct: 2694 gtgttggggtacagcagcatgtagggcatcttcacgggcccgttccggttcttgagcgcc 2635 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| | | | | |||||||||||||||||||| || ||||| | Sbjct: 2634 gggtccttgttcatgtcgaggatccgcttctcgatctccaccagccggctgccgaacctc 2575 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 |||||| |||| || ||||| | |||||| ||||||||||||||||| |||||| Sbjct: 2574 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgc 2521 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 ||||||| |||||||||||||||| ||||||| ||||| Sbjct: 2760 atggagacgctgttggggatgcccatggcggtgagccc 2723
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 2376 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 2317 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 2316 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 2257 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 2256 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 2210 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2442 atggagatgctgttggggatgcccatggcggtgagccc 2405
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 2855 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 2796 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 2795 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 2736 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 2735 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 2689 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2921 atggagatgctgttggggatgcccatggcggtgagccc 2884
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 1262 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 1203 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 1202 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 1143 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 1142 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 1096 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 1328 atggagatgctgttggggatgcccatggcggtgagccc 1291
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 2527 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 2468 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 2467 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 2408 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 2407 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 2361 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2593 atggagatgctgttggggatgcccatggcggtgagccc 2556
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 2857 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 2798 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 2797 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 2738 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 2737 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 2691 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2923 atggagatgctgttggggatgcccatggcggtgagccc 2886
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 69.9 bits (35), Expect = 6e-09 Identities = 134/167 (80%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| || Sbjct: 1427 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgcc 1368 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 | || ||||||| || | | | ||||||| |||||||||||| || ||||| | Sbjct: 1367 gagttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctc 1308 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 376 |||||| | ||||| ||||| | |||||| ||||||||||||||||| Sbjct: 1307 ttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtc 1261 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 1493 atggagatgctgttggggatgcccatggcggtgagccc 1456
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 67.9 bits (34), Expect = 2e-08 Identities = 184/234 (78%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 |||||||| |||||||||||| |||| || | ||| |||| || ||||| | ||| || Sbjct: 2585 gagatgctattggggatgcccctggcagtgatcccctcagccgcccccttattgtctgac 2526 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||| | | ||| ||||||| || || || || ||| |||||||||||| Sbjct: 2525 gtgttggggaacatcagtgtgtaggggaaattggctggaccgacccggttcttgagcagg 2466 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| || ||| |||||||| |||||||||||| | |||||||| | Sbjct: 2465 gggtccttgttcatgttcaacactttgctctcaatctccaccagctgcctgctgaacctc 2406 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||| | ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 2405 ttgaatgcttccagtgccttggggtctgatgtccactctggcgtgtcacgctgc 2352
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 67.9 bits (34), Expect = 2e-08 Identities = 184/234 (78%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 |||||||| |||||||||||| |||| || | ||| |||| || ||||| | ||| || Sbjct: 2651 gagatgctattggggatgcccctggcagtgatcccctcagccgcccccttattgtctgac 2592 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||| | | ||| ||||||| || || || || ||| |||||||||||| Sbjct: 2591 gtgttggggaacatcagtgtgtaggggaaattggctggaccgacccggttcttgagcagg 2532 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| || ||| |||||||| |||||||||||| | |||||||| | Sbjct: 2531 gggtccttgttcatgttcaacactttgctctcaatctccaccagctgcctgctgaacctc 2472 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||| | ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 2471 ttgaatgcttccagtgccttggggtctgatgtccactctggcgtgtcacgctgc 2418
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 67.9 bits (34), Expect = 2e-08 Identities = 184/234 (78%) Strand = Plus / Minus Query: 150 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 209 |||||||| |||||||||||| |||| || | ||| |||| || ||||| | ||| || Sbjct: 2659 gagatgctattggggatgcccctggcagtgatcccctcagccgcccccttattgtctgac 2600 Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||| | | ||| ||||||| || || || || ||| |||||||||||| Sbjct: 2599 gtgttggggaacatcagtgtgtaggggaaattggctggaccgacccggttcttgagcagg 2540 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| || ||| |||||||| |||||||||||| | |||||||| | Sbjct: 2539 gggtccttgttcatgttcaacactttgctctcaatctccaccagctgcctgctgaacctc 2480 Query: 330 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgc 383 ||||| | ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 2479 ttgaatgcttccagtgccttggggtctgatgtccactctggcgtgtcacgctgc 2426
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| | ||||| | ||||| ||||| | ||||| Sbjct: 2761 tctcgatatccaccagccggctgccgaacctcctgaacgcgtccagcgccttggcgtccg 2702 Query: 358 aggtccactccggcgtgtc 376 | ||||||||||||||||| Sbjct: 2701 acgtccactccggcgtgtc 2683 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2915 atggagatgctgttggggatgcccatggcggtgagccc 2878 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2849 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2793
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggc 175 ||||||||||||||||||||||||||||| Sbjct: 1552 atggagatgctgttggggatgcccttggc 1524 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 210 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| ||||||||||| || || || || || || ||||||||||| Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 145 aaatggagatgctgttggggatgccc 170 |||||||||||||||||||||||||| Sbjct: 22970458 aaatggagatgctgttggggatgccc 22970433
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 ||||||||||||||||| |||||| |||| |||||||| Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 145 aaatggagatgctgttggggatgccc 170 |||||||||||||||||||||||||| Sbjct: 22898649 aaatggagatgctgttggggatgccc 22898624
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 145 aaatggagatgctgttggggatgccc 170 |||||||||||||||||||||||||| Sbjct: 79735 aaatggagatgctgttggggatgccc 79710
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 145 aaatggagatgctgttggggatgccc 170 |||||||||||||||||||||||||| Sbjct: 2914 aaatggagatgctgttggggatgccc 2889
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 145 aaatggagatgctgttggggatgcc 169 ||||||||||||||||||||||||| Sbjct: 2772 aaatggagatgctgttggggatgcc 2748
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 145 aaatggagatgctgttggggatgccctt 172 |||||| ||||||||||||||||||||| Sbjct: 49249 aaatggtgatgctgttggggatgccctt 49276
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 145 aaatggagatgctgttggggatgccctt 172 |||||| ||||||||||||||||||||| Sbjct: 111408 aaatggtgatgctgttggggatgccctt 111435
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 44.1 bits (22), Expect = 0.33 Identities = 34/38 (89%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184 ||||||||||||||||| |||||| |||| || ||||| Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagccc 326 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccgg 317 |||||||||||||||||||| Sbjct: 209 tctcgatctccaccagccgg 190
>emb|CR339058.11| Zebrafish DNA sequence from clone CH211-135H16 in linkage group 23, complete sequence Length = 110857 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 tgaacacctccagggcctttg 351 ||||||||||||||||||||| Sbjct: 41562 tgaacacctccagggcctttg 41542
>emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in linkage group 23, complete sequence Length = 167014 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 tgaacacctccagggcctttg 351 ||||||||||||||||||||| Sbjct: 98945 tgaacacctccagggcctttg 98925
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtagagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 1892951 gtcggaggtgttgggggacagcagcgtgtaggg 1892983
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtagagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 21731 gtcggaggtgttgggggacagcagcgtgtaggg 21763
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtagagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 93429 gtcggaggtgttgggggacagcagcgtgtaggg 93461
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3123 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||| ||||||||| Sbjct: 2877 atggagatgctgtttgggatgccc 2854
>emb|AL954222.1| Pan troglodytes chromosome 22 clone q21.2, complete sequence Length = 208827 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 200815 gcccaccaccttgctccccatgtccaccagcc 200784
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 205921 gcccaccaccttgctccccatgtccaccagcc 205890
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 137475 gctgttggggatgcccttgccggt 137452
>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an STS and GSSs, complete sequence Length = 60837 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cacagacacacactacacca 77 |||||||||||||||||||| Sbjct: 58806 cacagacacacactacacca 58825
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ttcttgagctccgggtcatg 277 |||||||||||||||||||| Sbjct: 51161 ttcttgagctccgggtcatg 51142
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gccgggccgttgcggttctt 262 |||||||||||||||||||| Sbjct: 440838 gccgggccgttgcggttctt 440857
>gb|AF064858.2|AF064858 Homo sapiens chromosome 21 clone BAC 28F9, map 21q22.3, complete sequence Length = 194769 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 93205 gcccaccaccttgctccccatgtccaccagcc 93174
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 20830414 gctgttggggatgcccttgccggt 20830391
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||| ||||||||| Sbjct: 5276967 atggagatgctgtttgggatgccc 5276990
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||| ||||||||| Sbjct: 3270 atggagatgctgtttgggatgccc 3293
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 2681 gctgttggggatgcccttgccggt 2658
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full insert sequence Length = 3160 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||| ||||||||| Sbjct: 2876 atggagatgctgtttgggatgccc 2853
>gb|U76687.2|PVU76687 Phaseolus vulgaris lipoxygenase mRNA, complete cds Length = 3038 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ttaaatggagatgctgttggggat 166 |||||| ||||||||||||||||| Sbjct: 2871 ttaaatagagatgctgttggggat 2848
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full insert sequence Length = 2250 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||||| ||||||||| Sbjct: 2038 atggagatgctgtttgggatgccc 2015
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||| ||||||||||| Sbjct: 138 atggagatgctgctggggatgccc 161
>emb|AL954223.1| Pan troglodytes chromosome 22 clone PTB-187O16 map q21.2, complete sequence Length = 165877 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 63036 gcccaccaccttgctccccatgtccaccagcc 63005
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence Length = 1439 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 atggagatgctgttggggatgccc 170 |||||||||||| ||||||||||| Sbjct: 1210 atggagatgctgctggggatgccc 1187
>gb|AY098518.1| Ananas comosus lipoxygenase III mRNA, partial cds Length = 524 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 ggtccactccggcgtgtcccgctg 382 |||||||||||||||||| ||||| Sbjct: 308 ggtccactccggcgtgtcgcgctg 285
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctgttggggatgcccttggcggt 178 ||||||||||||||||||| |||| Sbjct: 21140649 gctgttggggatgcccttgccggt 21140626
>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cacagacacacactacacca 77 |||||||||||||||||||| Sbjct: 40251 cacagacacacactacacca 40232 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,314,883 Number of Sequences: 3902068 Number of extensions: 3314883 Number of successful extensions: 66247 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65847 Number of HSP's gapped (non-prelim): 384 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
