Clone Name | rbastl19e10 |
---|---|
Clone Library Name | barley_pub |
>MRP_STRSU (P32653) Muramidase-released protein precursor (136 kDa surface| protein) Length = 1256 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 178 KITFRVLIHHKMQPEAS--FFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSAS 336 + T VL + ++P S F H +++ +SN+ TYD AS N G+ SA+ Sbjct: 292 RTTGDVLEKYTIEPGESVTFSHPTKVNANNSNITVTYDTSLASANTPGALKFSAN 346
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 263 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 153 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 263 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 153 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>ZN272_HUMAN (Q14592) Zinc finger protein 272 (Zinc finger protein 460) (Zinc| finger protein HZF8) Length = 562 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 Query: 255 TGQQPCDHIRCSKCFCQL*RLVKSFS 332 TG++P I+C K FC+ L++ FS Sbjct: 443 TGEKPYVCIQCGKAFCRTTNLIRHFS 468
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +3 Query: 69 PGQSVA*FNYIQDHSKRTSIQMN*PQLGLDNISCIPQNNIQ---SSHTPQ 209 P S+A +QDHS ++S + P+ ++ S P NI SS T Q Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826
>SMOX1_SCHMA (Q26600) Homeobox protein SMOX-1 (Fragment)| Length = 280 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 98 HPRSQQKNIHPNELTTTRPGQHFMHPT 178 +P S Q +PN L G +FMHPT Sbjct: 24 YPTSNQLKSYPNGLLNPFNGTNFMHPT 50
>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42| Length = 723 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/66 (27%), Positives = 26/66 (39%) Frame = +3 Query: 111 SKRTSIQMN*PQLGLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 290 S +T+++ +D + IP N SH + H F PC+H C Sbjct: 114 SSKTALRTGSSDTQVDEVKSIPAN----SHLVNHLNCPMCSRLRLHSF--MLPCNHSLCE 167 Query: 291 KCFCQL 308 KC QL Sbjct: 168 KCLRQL 173
>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) Length = 534 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +3 Query: 186 IQSSHTPQNATRSFLLPFL 242 +Q T NATR FLLPFL Sbjct: 117 VQGFFTSNNATRDFLLPFL 135
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +1 Query: 196 LIHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 294 L HH+M P + FH +SS S+ ATT +P+ Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245
>Y1217_CAMJE (Q9PN78) UPF0124 protein Cj1217c| Length = 226 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +3 Query: 168 CIPQNNIQSSHTPQNATRSFLLPFLC 245 C+ Q +Q+SH +N F+LP +C Sbjct: 123 CVDQITMQNSHLDKNKFHLFILPGIC 148
>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)| Length = 390 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +1 Query: 166 HASHKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAP 291 H H + R I H +SF H+ + DSN +++ D P Sbjct: 163 HHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQP 204
>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 417 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = -2 Query: 296 AFGASYVVARLLSSEEMTQEWKKE 225 A+GA +VA+LL + E+T++W K+ Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,806,984 Number of Sequences: 219361 Number of extensions: 962451 Number of successful extensions: 2637 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2438 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2637 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)