>NU2M_NEUCR (Q35140) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 583

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -3

Query: 329 TAMFLLFC-LFTAIILYITPFQVIALCLGFFWMRHPRFRHKVPAA 198
           T +F +F  L + +IL +T F  I     F+ MRHPRF +K P A
Sbjct: 64  TQVFQIFIFLISILILQLTSFDPIKK---FYIMRHPRFINKWPRA 105

>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast|
           precursor
          Length = 212

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -3

Query: 455 DLIRMRYDRLRHVA---GRIQ--TVVGDIATQGERLQSLLSWRDPRATA 324
           D  + R+DRLR+V    GRI    VVG I  Q  RL  +LS+++  A A
Sbjct: 57  DADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFA 105

>IMMA_CITFR (P05701) Colicin-A immunity protein (Microcin-A immunity protein)|
          Length = 178

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -3

Query: 386 IATQGERLQSLLSWRDPRATAMFLLFCL---FTAIILYITPFQV 264
           IAT  E L S+ S  +P  T +  ++C    F A+ILYI  F++
Sbjct: 48  IATSTENLPSITSSYNPLMTKVMDIYCKTAPFLALILYILTFKI 91

>AMSL_ERWAM (Q46639) Amylovoran biosynthesis protein amsL|
          Length = 388

 Score = 26.9 bits (58), Expect(2) = 5.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 320 FLLFCLFTAIILYITPFQVIALCLGFF 240
           FL F  FT I+LY +P  V A+ LG F
Sbjct: 92  FLAFA-FTVILLYYSPLGVSAVILGLF 117



 Score = 20.8 bits (42), Expect(2) = 5.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 210 GARSASKLLQEATCKDGLIVVKVLGHEL 127
           G+++ ++L  +A   D LIV KV+G EL
Sbjct: 158 GSQTINQLRTQA---DSLIVGKVMGAEL 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,144,049
Number of Sequences: 219361
Number of extensions: 1228099
Number of successful extensions: 3426
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3426
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)