ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl19e07 |
|---|---|
| Clone Library Name | barley_pub |
>PHT19_ARATH (Q9S735) Inorganic phosphate transporter 1-9 (AtPht1;9) (H(+)/Pi| cotransporter) Length = 532 Score = 31.6 bits (70), Expect = 0.50 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = -3 Query: 327 IQFMPFF*ITIVALVAALFVTWIWSEKKELRDKWR*LRPLML*CK*NFGP*STS 166 IQ M FF + +V LVA + +W WS+ ++ + L L+ NFGP +T+ Sbjct: 372 IQMMGFFLMAVVYLVAGIPYSWYWSKHEKTNKGFMVLYGLIFFFS-NFGPNTTT 424
>CYPC_BACSU (O31440) Cytochrome P450 152A1 (EC 1.14.-.-) (P450BsBeta) (Fatty| acid beta-hydroxylase) Length = 417 Score = 30.8 bits (68), Expect = 0.85 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +3 Query: 63 LTAQVPHAASSQESNFTLK---CYINNRTLALNKRKITMSTRAQNFICITTLEAS 218 + Q+PH S S LK +I NRT N +NFIC+T EA+ Sbjct: 1 MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAA 55
>PHT18_ARATH (Q9SYQ1) Inorganic phosphate transporter 1-8 (AtPht1;8) (H(+)/Pi| cotransporter) Length = 534 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -3 Query: 327 IQFMPFF*ITIVALVAALFVTWIWSEKKELRDKWR*LRPLM-L*CK*NFGP*STS 166 IQ M FF + ++ LVA + +W WS+ + + L L+ C NFGP +T+ Sbjct: 362 IQIMGFFFMAVIYLVAGIPYSWYWSKHEHNNKGFMVLYGLVFFFC--NFGPNTTT 414
>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3 Query: 63 LTAQVPHAASSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 194 +T + PH NFT K Y N +L N +KI ++ +NF+ Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524
>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3 Query: 63 LTAQVPHAASSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 194 +T + PH NFT K Y N +L N +KI ++ +NF+ Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524
>YEJM_SALTY (P40709) Inner membrane protein yejM| Length = 586 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -3 Query: 312 FF*ITIVALVAALFVTWIWSEKKELRDKWR*LRPL 208 F + ++ L+ LF TW W + + L + RPL Sbjct: 139 FISVPVILLIEMLFATWSWQKLRSLTRRRHFARPL 173
>YEJM_SALTI (Q8Z579) Inner membrane protein yejM| Length = 586 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -3 Query: 312 FF*ITIVALVAALFVTWIWSEKKELRDKWR*LRPL 208 F + ++ L+ LF TW W + + L + RPL Sbjct: 139 FISVPVILLIEMLFATWSWQKLRSLTRRRHFARPL 173
>YEJM_ECOLI (P0AD27) Inner membrane protein yejM| Length = 586 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 312 FF*ITIVALVAALFVTWIWSEKKELRDKWR*LRPL 208 F + ++ L+ +F TW W + + L + R RPL Sbjct: 139 FISVPVILLLELVFATWSWQKLRSLTRRRRFARPL 173
>YEJM_ECOL6 (P0AD28) Inner membrane protein yejM| Length = 586 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 312 FF*ITIVALVAALFVTWIWSEKKELRDKWR*LRPL 208 F + ++ L+ +F TW W + + L + R RPL Sbjct: 139 FISVPVILLLELVFATWSWQKLRSLTRRRRFARPL 173
>YEJM_ECO57 (P0AD29) Inner membrane protein yejM| Length = 586 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 312 FF*ITIVALVAALFVTWIWSEKKELRDKWR*LRPL 208 F + ++ L+ +F TW W + + L + R RPL Sbjct: 139 FISVPVILLLELVFATWSWQKLRSLTRRRRFARPL 173
>ALP6_SCHPO (Q9USQ2) Spindle pole body component alp6 (Altered polarity protein| 6) Length = 832 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +3 Query: 78 PHAASSQESNFTLKCYINNRTLALNKRKITMSTRAQNFIC-ITTLEASITSTCLL 239 P + S + + K +IN+++LAL K +S NF+ I +L++ I + L Sbjct: 251 PSVSQSIDGDNVSKAFINDQSLALQSLKSVISKELTNFLALIASLDSQIRADASL 305
>DNS2B_MOUSE (Q9QY48) Deoxyribonuclease-2-beta precursor (EC 3.1.22.1)| (Deoxyribonuclease II beta) (DNase II beta) (DNase2-like acid DNase) (DNase II-like acid DNase) (Endonuclease DLAD) Length = 354 Score = 28.1 bits (61), Expect = 5.5 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = +2 Query: 200 HNIRGLNYLHLSLNSFFSDQI 262 H+ +GLN++H + +SF++D I Sbjct: 223 HSAQGLNFVHFAKSSFYTDDI 243
>CD2_HORSE (P37998) T-cell surface antigen CD2 precursor| Length = 347 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +3 Query: 102 SNFTLKCYINNRTLALNKRKITMSTRAQN----FICITTLEASITSTCLLI 242 ++F LK Y+N R + + RK+ + RA N F C S S+ ++I Sbjct: 147 TDFELKLYLNGRMIQKSPRKVIVYKRASNQIASFKCTANNTVSEESSSVVI 197
>RNAS8_MIOTA (Q8SPZ7) Ribonuclease 8 precursor (EC 3.1.27.-) (RNase 8)| Length = 154 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -3 Query: 105 LILGMTLHEVPVQLEILDMTSKNWQITRGI 16 L+LG+ + ++PV + DMTS W T+ + Sbjct: 14 LLLGLRVAQIPVSAKPKDMTSSQWFKTQHV 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,159,664 Number of Sequences: 219361 Number of extensions: 815357 Number of successful extensions: 1831 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1814 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1831 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
