Clone Name | rbastl19e06 |
---|---|
Clone Library Name | barley_pub |
>emb|BX465206.15| Zebrafish DNA sequence from clone DKEYP-25A3 in linkage group 19, complete sequence Length = 161014 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 gcataacatgttaaactcactg 106 |||||||||||||||||||||| Sbjct: 142102 gcataacatgttaaactcactg 142123
>emb|BX000986.4| Zebrafish DNA sequence from clone CH211-210B19 in linkage group 19, complete sequence Length = 151501 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 gcataacatgttaaactcactg 106 |||||||||||||||||||||| Sbjct: 117370 gcataacatgttaaactcactg 117349
>gb|AC107862.10| Mus musculus chromosome 7, clone RP23-378D16, complete sequence Length = 188701 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 ccatgttcaacacaagagcagggtt 408 ||||||||||||||||| ||||||| Sbjct: 140143 ccatgttcaacacaagaacagggtt 140167
>emb|BX649352.15| Zebrafish DNA sequence from clone DKEY-196J7 in linkage group 1, complete sequence Length = 226763 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 gcataacatgttcaactcaca 298 ||||||||||||||||||||| Sbjct: 84926 gcataacatgttcaactcaca 84946
>gb|AC114612.13| Mus musculus chromosome 7, clone RP24-80O23, complete sequence Length = 189471 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 384 ccatgttcaacacaagagcagggtt 408 ||||||||||||||||| ||||||| Sbjct: 139777 ccatgttcaacacaagaacagggtt 139753
>gb|AC092129.3| Homo sapiens chromosome 16 clone RP11-140O8, complete sequence Length = 190333 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ttcaactcacagggcataga 183 |||||||||||||||||||| Sbjct: 101829 ttcaactcacagggcataga 101810
>ref|XM_810010.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509029.40) partial mRNA Length = 2913 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 acgagattccacaacacaga 59 |||||||||||||||||||| Sbjct: 1570 acgagattccacaacacaga 1589
>gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete sequence Length = 70416 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gcataacatgttaaactcac 104 |||||||||||||||||||| Sbjct: 4765 gcataacatgttaaactcac 4784
>emb|BX321867.5| Human DNA sequence from clone RP11-533H4 on chromosome X, complete sequence Length = 91774 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 agggttcaagattaccatgc 422 |||||||||||||||||||| Sbjct: 45410 agggttcaagattaccatgc 45391
>emb|BX248330.6| Zebrafish DNA sequence from clone CH211-278E17 in linkage group 22, complete sequence Length = 189880 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 actacacataacatgttcaa 29 |||||||||||||||||||| Sbjct: 164329 actacacataacatgttcaa 164310 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 actacacataacatgttcaa 222 |||||||||||||||||||| Sbjct: 164329 actacacataacatgttcaa 164310 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,337,170 Number of Sequences: 3902068 Number of extensions: 3337170 Number of successful extensions: 54221 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54190 Number of HSP's gapped (non-prelim): 31 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)