Clone Name | rbastl19e05 |
---|---|
Clone Library Name | barley_pub |
>KINH_MOUSE (Q61768) Kinesin heavy chain (Ubiquitous kinesin heavy chain)| (UKHC) Length = 963 Score = 32.0 bits (71), Expect = 0.38 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +3 Query: 123 QDNIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHRKLVDSTNDEL-WKEKQASTLQPQ 299 Q+ +H K N + E A ++ ++ H+K + S DE+ KEK + LQ Q Sbjct: 677 QEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRETHQKQISSLRDEVEAKEKLITDLQDQ 736 Query: 300 NRR 308 N++ Sbjct: 737 NQK 739
>ZG14_HUMAN (Q9Y3A4) Gastric cancer antigen Zg14| Length = 280 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/48 (25%), Positives = 24/48 (50%) Frame = +1 Query: 103 PKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTENWLT 246 PK + +++ Y + QKP G++ LK P+ S ++ W++ Sbjct: 110 PKPVPGFQVAYVVFQKPSGVSAALALKGPLLVSTESHPVKSGIHKWIS 157
>ZG14_MOUSE (Q9D1C9) Gastric cancer antigen Zg14 homolog| Length = 280 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/48 (25%), Positives = 24/48 (50%) Frame = +1 Query: 103 PKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTENWLT 246 PK + +++ Y + QKP G++ LK P+ S ++ W++ Sbjct: 110 PKPVPGFQVAYVVFQKPSGVSAALNLKGPLLVSTESHLVKSGIHKWIS 157
>CUT20_SCHPO (O42839) 20S cyclosome/APC complex protein cut20 (Cell untimely| torn protein 20) Length = 719 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Frame = +3 Query: 138 STSKTIWNGDHQSLEATNACTNE-----LPQNKIQHRKLVDSTNDELWKEKQAS 284 S S+ IW+ D LEAT C N + K K++DS+ L +++ AS Sbjct: 56 SNSQRIWDVDFHDLEATELCWNHDGNLIVVGFKNGELKIIDSSTGHLVEQRPAS 109
>KINH_HUMAN (P33176) Kinesin heavy chain (Ubiquitous kinesin heavy chain)| (UKHC) Length = 963 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 123 QDNIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHRKLVDSTNDEL-WKEKQASTLQPQ 299 Q+ +H K N + E A ++ ++ H+K + S DE+ K K + LQ Q Sbjct: 677 QEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRETHQKQISSLRDEVEAKAKLITDLQDQ 736 Query: 300 NRR 308 N++ Sbjct: 737 NQK 739
>NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytoplasmic 3| (NF-ATc3) (NFATc3) (T cell transcription factor NFAT4) (NF-AT4) (NFATx) Length = 1075 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +1 Query: 136 TLHQKPYGMA-TTNPLKRPMHAQMNSPRIRFNTENWLTVPMTNYGKKSKP-QPCSHK 300 T HQ+ YG+ + +P + P H SPR ENWL+ P G S+P PC + Sbjct: 224 TWHQQ-YGLGHSLSPRQSPCH----SPRSSVTDENWLS-PRPASGPSSRPTSPCGKR 274
>YIF5_YEAST (P40523) Hypothetical 70.7 kDa protein in SNP1-GPP1 intergenic| region Length = 627 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/52 (30%), Positives = 30/52 (57%) Frame = +3 Query: 129 NIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHRKLVDSTNDELWKEKQAS 284 NI +TS NGD ++L+A N T Q +I H++L N++ ++++ + Sbjct: 343 NIPTTST---NGDDRALQAKNGGTITPSQTQINHKRLKHIFNEKSFRKQMTN 391
>XKR7_PANTR (Q49LS1) XK-related protein 7| Length = 579 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/70 (34%), Positives = 30/70 (42%) Frame = -3 Query: 222 SYSGGVHLCMHWSLQGIGGRHSIWFLM*SVYYLVFKYDFGACCVKDVREMAKIVVG*VEQ 43 SY G V + W L I R + L SVY L F G C V M V+ Sbjct: 295 SYKGAVAQVL-WHLFSIAARGLAFALFASVYKLYF----GICIVGHWSVMTFWVIQGETD 349 Query: 42 WCISFGNEIV 13 +C+S G EI+ Sbjct: 350 FCMSKGEEII 359
>LNT_RICCN (Q92IC5) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) Length = 499 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +3 Query: 111 HI*IQDNIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHRKLVDSTN 254 HI + +N+ T IW+ EA +++PQ K + K+++STN Sbjct: 242 HINLSENLEPTDLIIWS------EAALVVPDDIPQVKSKLLKMLNSTN 283
>CHBBA_CROHO (P81508) CHH-B alpha subunit| Length = 127 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 271 KSKPQPCSHKTEENYVDRMDCSM 339 ++K QPCS EN VD DC M Sbjct: 75 QNKGQPCSSIYSENLVDPFDCFM 97
>ZG14_PONPY (Q5RA17) Gastric cancer antigen Zg14 homolog| Length = 280 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/48 (22%), Positives = 24/48 (50%) Frame = +1 Query: 103 PKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTENWLT 246 PK + +++ Y + QKP G++ L+ P+ S ++ W++ Sbjct: 110 PKPVPGFRVGYVVFQKPSGVSAALALQGPLLVSTESHPVKTGIHKWIS 157
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +1 Query: 10 HNNLITKTDAPLFNSTDNNFRHFPYIFDAASPKIIFEYKIIYTLHQKP 153 HN +T TD+ F ST + + P++F + +I++ HQ P Sbjct: 114 HNYRLTPTDSVRFPSTSPHLPNTPFVFMHDALMYYQPEQILHLFHQVP 161
>PALB_DEBHA (Q6BH66) Calpain-like protease palB/RIM13 (EC 3.4.22.-) (Cysteine| protease RIM13) Length = 764 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 4/77 (5%) Frame = +1 Query: 55 TDNNFRHFPYIFDAASPKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTE 234 +D + HF Y + +P F+YK T T+ ++P + +N N Sbjct: 352 SDQDLHHFKYFYINWNPNAFFKYKFHMTFIYNVKDNTGTHMYQKPQFSLLNPTEDSQNV- 410 Query: 235 NWLT----VPMTNYGKK 273 WL +P+ N+ ++ Sbjct: 411 -WLLLEKHLPLKNFSEQ 426
>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3| (NF-ATc3) (NFATc3) (T cell transcription factor NFAT4) (NF-AT4) (NFATx) Length = 1075 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +1 Query: 142 HQKPYGMATTNPLKRPMHAQMNSPRIRFNTENWLTVPMTNYGKKSKP-QPCSHK 300 HQ+ + +P + P H SPR ENWL+ P G S+P PC + Sbjct: 226 HQQYGSGHSLSPRQSPCH----SPRSSITDENWLS-PRPASGPSSRPTSPCGKR 274
>ZN11B_HUMAN (Q06732) Zinc finger protein 11B| Length = 778 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 151 PYGMATTNPLKRPMHAQMNSPRIRFNTENWLTVPMTNY-GKKS 276 P+ M ++ R M Q +S + FNT + L + NY GKKS Sbjct: 125 PFNMDVSSFPSRKMFCQYDSRGMSFNTVSELVISKINYLGKKS 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,047,419 Number of Sequences: 219361 Number of extensions: 1100165 Number of successful extensions: 3011 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3011 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)