>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  103 bits (52), Expect = 4e-19
 Identities = 135/158 (85%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                            
Query: 103      cccaaaatcatatttgaatacaagataatatacac--tctacatcaaaaaccatatggaa 160
                ||||||| ||||| ||| |||||||||||||||||  |||||||||||| ||||||| ||
Sbjct: 23202954 cccaaaaccatatctgagtacaagataatatacacactctacatcaaaa-ccatatgaaa 23203012

                                                                            
Query: 161      tggcgaccaccaatcccttgaagcgaccaat--gcatgcacaaatgaactcccccagaat 218
                |||| ||| ||||| ||||||||| | ||||  |||| ||||||||||||| |||| || 
Sbjct: 23203013 tggcaacctccaattccttgaagccagcaatgcgcattcacaaatgaactcacccacaa- 23203071

                                                      
Query: 219      aagattcaacacagaaaattggttgacagtaccaatga 256
                | ||||||||||| | ||||||||||| ||| ||||||
Sbjct: 23203072 atgattcaacacaaagaattggttgacggtaacaatga 23203109



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 325      atggactgtagcatgagctgctgctgtggttg 356
                |||||||| ||||  |||||||||||||||||
Sbjct: 23203179 atggactgcagcagaagctgctgctgtggttg 23203210

>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1562_B11
          Length = 112144

 Score =  103 bits (52), Expect = 4e-19
 Identities = 135/158 (85%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                         
Query: 103   cccaaaatcatatttgaatacaagataatatacac--tctacatcaaaaaccatatggaa 160
             ||||||| ||||| ||| |||||||||||||||||  |||||||||||| ||||||| ||
Sbjct: 65868 cccaaaaccatatctgagtacaagataatatacacactctacatcaaaa-ccatatgaaa 65926

                                                                         
Query: 161   tggcgaccaccaatcccttgaagcgaccaat--gcatgcacaaatgaactcccccagaat 218
             |||| ||| ||||| ||||||||| | ||||  |||| ||||||||||||| |||| || 
Sbjct: 65927 tggcaacctccaattccttgaagccagcaatgcgcattcacaaatgaactcacccacaa- 65985

                                                   
Query: 219   aagattcaacacagaaaattggttgacagtaccaatga 256
             | ||||||||||| | ||||||||||| ||| ||||||
Sbjct: 65986 atgattcaacacaaagaattggttgacggtaacaatga 66023



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 325   atggactgtagcatgagctgctgctgtggttg 356
             |||||||| ||||  |||||||||||||||||
Sbjct: 66093 atggactgcagcagaagctgctgctgtggttg 66124

>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1699_E05
          Length = 170666

 Score =  103 bits (52), Expect = 4e-19
 Identities = 135/158 (85%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                          
Query: 103    cccaaaatcatatttgaatacaagataatatacac--tctacatcaaaaaccatatggaa 160
              ||||||| ||||| ||| |||||||||||||||||  |||||||||||| ||||||| ||
Sbjct: 147138 cccaaaaccatatctgagtacaagataatatacacactctacatcaaaa-ccatatgaaa 147196

                                                                          
Query: 161    tggcgaccaccaatcccttgaagcgaccaat--gcatgcacaaatgaactcccccagaat 218
              |||| ||| ||||| ||||||||| | ||||  |||| ||||||||||||| |||| || 
Sbjct: 147197 tggcaacctccaattccttgaagccagcaatgcgcattcacaaatgaactcacccacaa- 147255

                                                    
Query: 219    aagattcaacacagaaaattggttgacagtaccaatga 256
              | ||||||||||| | ||||||||||| ||| ||||||
Sbjct: 147256 atgattcaacacaaagaattggttgacggtaacaatga 147293



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 325    atggactgtagcatgagctgctgctgtggttg 356
              |||||||| ||||  |||||||||||||||||
Sbjct: 147363 atggactgcagcagaagctgctgctgtggttg 147394

>gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gene cluster, complete
             sequence
          Length = 19112

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 32    ctgatgcaccattgttcaactcaaccga 59
             ||||||||| ||||||||||||||||||
Sbjct: 10519 ctgatgcactattgttcaactcaaccga 10546

>gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, complete sequence
          Length = 196977

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   aaatcatatttgaatacaaga 127
             |||||||||||||||||||||
Sbjct: 60714 aaatcatatttgaatacaaga 60694

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 336     catgagctgctgctgtggttg 356
               |||||||||||||||||||||
Sbjct: 3292178 catgagctgctgctgtggttg 3292158

>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0015I14
          Length = 150650

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 336   catgagctgctgctgtggttg 356
             |||||||||||||||||||||
Sbjct: 79541 catgagctgctgctgtggttg 79521

>dbj|AK109271.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-A07, full
           insert sequence
          Length = 588

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 336 catgagctgctgctgtggttg 356
           |||||||||||||||||||||
Sbjct: 46  catgagctgctgctgtggttg 26

>emb|CR792454.8| Zebrafish DNA sequence from clone CH211-9F20 in linkage group 4,
             complete sequence
          Length = 195790

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 330   ctgtagcatgagctgctgctg 350
             |||||||||||||||||||||
Sbjct: 90844 ctgtagcatgagctgctgctg 90864

>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   atcatatttgaatacaagataata 132
             ||||||| ||||||||||||||||
Sbjct: 30180 atcatatctgaatacaagataata 30203

>ref|XM_478818.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3372

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 325  atggactgtagcatgagctgctgctgtggttg 356
            |||||||| ||||  |||||||||||||||||
Sbjct: 3359 atggactgcagcagaagctgctgctgtggttg 3328

>gb|AC159127.8| Mus musculus chromosome 3, clone RP24-214E8, complete sequence
          Length = 195609

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   ttgaatacaagataatatac 135
             ||||||||||||||||||||
Sbjct: 66803 ttgaatacaagataatatac 66822

>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 258     gaattatggaaagaaaagca 277
               ||||||||||||||||||||
Sbjct: 1313548 gaattatggaaagaaaagca 1313529

>gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G9, complete sequence
          Length = 140056

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   gaattatggaaagaaaagca 277
             ||||||||||||||||||||
Sbjct: 27365 gaattatggaaagaaaagca 27384

>emb|AJ853849.1| Sus scrofa PRSS11 gene (partial), DMBT1 gene, AWN gene, AQN-1 gene,
              PSP-II gene, PSP-I gene, AQN-3 gene and C10ORF120 gene
          Length = 270148

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 288    ttgcagccacaaaacagaagagaa 311
              |||||||||||||| |||||||||
Sbjct: 248674 ttgcagccacaaaaaagaagagaa 248697

>gb|AC107368.11| Mus musculus chromosome 3, clone RP23-243N8, complete sequence
          Length = 253744

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    ttgaatacaagataatatac 135
              ||||||||||||||||||||
Sbjct: 246296 ttgaatacaagataatatac 246315

>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence
          Length = 210189

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 109 atcatatttgaatacaagataata 132
           ||||||| ||||||||||||||||
Sbjct: 755 atcatatctgaatacaagataata 732

>emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A23 on chromosome 6 Contains an
             adaptor-related (clathrin-associated) protein complex 4,
             sigma 1 subunit (AP4A1) pseudogene, a novel pseudogene,
             the 5' end of the RNGTT gene for RNA guanylyltransferase
             and 5'-phosphatase (mRNA capping enzyme, CAP1A) and two
             CpG islands, complete sequence
          Length = 150541

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gaatacaagataatatacac 137
             ||||||||||||||||||||
Sbjct: 51067 gaatacaagataatatacac 51048

>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4
          Length = 272698

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    aaaatcatatttgaatacaa 125
              ||||||||||||||||||||
Sbjct: 156720 aaaatcatatttgaatacaa 156701

>gb|AY649844.2| Schistosoma mansoni insulin receptor tyrosine kinase 3 (RTK-3) mRNA,
            complete cds
          Length = 5521

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 171  caatcccttgaagcgaccaa 190
            ||||||||||||||||||||
Sbjct: 4758 caatcccttgaagcgaccaa 4777

>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence
          Length = 191923

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 114    atttgaatacaagataatatacac 137
              |||||||||||| |||||||||||
Sbjct: 125542 atttgaatacaaaataatatacac 125519

>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence
          Length = 180202

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   tcaaccttgcagccacaaaa 301
             ||||||||||||||||||||
Sbjct: 84712 tcaaccttgcagccacaaaa 84731

>gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complete sequence
          Length = 176709

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    taatatacactctacatcaa 147
              ||||||||||||||||||||
Sbjct: 126762 taatatacactctacatcaa 126743

>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    atcatatttgaatacaagataata 132
              ||||||| ||||||||||||||||
Sbjct: 153532 atcatatctgaatacaagataata 153509

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 251     caatgacgaattatggaaagaaaa 274
               |||||| |||||||||||||||||
Sbjct: 1817212 caatgatgaattatggaaagaaaa 1817189

>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH077A05, complete sequence
          Length = 113253

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    caagccccaaaatcatattt 117
             ||||||||||||||||||||
Sbjct: 33183 caagccccaaaatcatattt 33202


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,077,544
Number of Sequences: 3902068
Number of extensions: 4077544
Number of successful extensions: 80875
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80759
Number of HSP's gapped (non-prelim): 104
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)