ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XK_RAT (Q5GH61) Membrane transport protein XK (XK-related protei... 28 6.8

>XK_RAT (Q5GH61) Membrane transport protein XK (XK-related protein 1) (XK|
           homolog)
          Length = 445

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -2

Query: 146 CVPTWKKHGVAEEMAVLRTLLHALTIWIVLLLVRQLAGWHYIPCIHFF 3
           C+  W+   +A  + VL      L IW+V++++     +   P I F+
Sbjct: 209 CIFLWRSFEIATRVIVLVLFTSVLKIWVVVVILVNFFSFFLYPWILFW 256


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,012,265
Number of Sequences: 219361
Number of extensions: 420904
Number of successful extensions: 1095
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 80,573,946
effective HSP length: 31
effective length of database: 73,773,755
effective search space used: 1770570120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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