Clone Name | rbastl19d09 |
---|---|
Clone Library Name | barley_pub |
>TFDA_BURSR (Q45423) Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate| dioxygenase (EC 1.14.11.-) (2,4-D dioxygenase) Length = 297 Score = 31.6 bits (70), Expect = 0.49 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -2 Query: 288 ADSAAVQVPGRPGRPLNHWNKMASQPCSTYAILLAATLLPSAGNTNF 148 A++ A +V G L H + QP + Y++L A L PS G+T F Sbjct: 97 AEADAREVVGNFANQLWHSDSSFQQPAARYSMLSAIVLPPSGGDTEF 143
>TFDA_RALEJ (P10088) Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate| dioxygenase (EC 1.14.11.-) (2,4-D dioxygenase) Length = 287 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -2 Query: 288 ADSAAVQVPGRPGRPLNHWNKMASQPCSTYAILLAATLLPSAGNTNF 148 A A +V G L H + QP + Y++L A + PS G+T F Sbjct: 97 AQRDAREVVGNFANQLWHSDSSFQQPAARYSMLSAVVVPPSGGDTEF 143
>LOX5_MESAU (P51399) Arachidonate 5-lipoxygenase (EC 1.13.11.34)| (5-lipoxygenase) (5-LO) Length = 672 Score = 28.5 bits (62), Expect = 4.2 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +2 Query: 41 KRLYNLPKVLPTYSETTAVSFSRH---EK*SQERNILTIKFVLPADGKSVAANRMAYVEH 211 KR LP+ LP +E S RH E+ QE NI + + L DG + AN+ H Sbjct: 245 KRCRELPQKLPVTTEMVECSLERHLSLEQEVQEGNIFIVDYEL-LDG--IDANKTDPCTH 301 Query: 212 GWLA 223 +LA Sbjct: 302 QFLA 305
>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/46 (43%), Positives = 23/46 (50%) Frame = +3 Query: 213 AGSPFCSNG*EGDQGDRGLAQQPNLQRFTQKQKFLEHPRYIITSSV 350 AG+ FCSN EGD N Q FTQ + P I+TSSV Sbjct: 537 AGNFFCSNHWEGD--------SLNTQLFTQASPVADMPN-ILTSSV 573
>AGLU_CANTS (P29064) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| [Contains: Alpha-glucosidase subunit 1; Alpha-glucosidase subunit 2] Length = 1070 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +3 Query: 246 GDQGDRGLAQQPNLQRFTQKQKFLEHPRYIITSSVFGGES 365 G GD+ + PN Q Q++L +P Y I + + E+ Sbjct: 618 GGNGDKFGPEDPNYQYANSSQRYLSNPPYAIHNGIHISET 657 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,288,108 Number of Sequences: 219361 Number of extensions: 1119925 Number of successful extensions: 2912 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2800 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2912 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)