ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1T2R55_PONPY (Q645U9) Taste receptor type 2 member 55 (T2R55) 28 4.3
2T2R55_PAPHA (Q646G3) Taste receptor type 2 member 55 (T2R55) 28 4.3
3T2R55_PANTR (Q646B8) Taste receptor type 2 member 55 (T2R55) 28 4.3
4T2R55_PANPA (Q5Y4Z2) Taste receptor type 2 member 55 (T2R55) 28 4.3
5T2R55_HUMAN (Q7RTR8) Taste receptor type 2 member 55 (T2R55) 28 4.3
6HSLO_BACSU (P37565) 33 kDa chaperonin (Heat shock protein 33 hom... 28 4.3
7T2R55_GORGO (Q645Z3) Taste receptor type 2 member 55 (T2R55) 28 5.6
8RNS10_RAT (Q5GAM0) Ribonuclease-like protein 10 precursor (Prote... 28 5.6
9ADA24_MOUSE (Q9R160) ADAM 24 precursor (EC 3.4.24.-) (A disinteg... 27 9.5
10DPOLA_DROME (P26019) DNA polymerase alpha catalytic subunit (EC ... 27 9.5
11SIP3_YEAST (P38717) Protein SIP3 27 9.5

>T2R55_PONPY (Q645U9) Taste receptor type 2 member 55 (T2R55)|
          Length = 314

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 257 TDSLTCWLAGCISFFFFVAELH 322
           T+ LT WLA C+S F+F    H
Sbjct: 92  TNHLTTWLATCLSIFYFFKIAH 113



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>T2R55_PAPHA (Q646G3) Taste receptor type 2 member 55 (T2R55)|
          Length = 314

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 257 TDSLTCWLAGCISFFFFVAELH 322
           T+ LT WLA C+S F+F    H
Sbjct: 92  TNHLTTWLATCLSIFYFFKIAH 113



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>T2R55_PANTR (Q646B8) Taste receptor type 2 member 55 (T2R55)|
          Length = 314

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 257 TDSLTCWLAGCISFFFFVAELH 322
           T+ LT WLA C+S F+F    H
Sbjct: 92  TNHLTTWLATCLSIFYFFKIAH 113



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>T2R55_PANPA (Q5Y4Z2) Taste receptor type 2 member 55 (T2R55)|
          Length = 314

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 257 TDSLTCWLAGCISFFFFVAELH 322
           T+ LT WLA C+S F+F    H
Sbjct: 92  TNHLTTWLATCLSIFYFFKIAH 113



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>T2R55_HUMAN (Q7RTR8) Taste receptor type 2 member 55 (T2R55)|
          Length = 314

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 257 TDSLTCWLAGCISFFFFVAELH 322
           T+ LT WLA C+S F+F    H
Sbjct: 92  TNHLTTWLATCLSIFYFFKIAH 113



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>HSLO_BACSU (P37565) 33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33)|
          Length = 291

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 297 KEIQPASQQVSESVPVLFHCPASQQFF 217
           +E+     ++ E++PV FHCP S++ F
Sbjct: 216 EEVLGEKPEILETMPVRFHCPCSKERF 242



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>T2R55_GORGO (Q645Z3) Taste receptor type 2 member 55 (T2R55)|
          Length = 299

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 257 TDSLTCWLAGCISFFFFVAELH 322
           T+ LT WLA C+S F+F    H
Sbjct: 92  TNHLTTWLATCLSVFYFFKIAH 113



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>RNS10_RAT (Q5GAM0) Ribonuclease-like protein 10 precursor (Protein Train A)|
          Length = 212

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 13/59 (22%)
 Frame = -2

Query: 224 NSLFVDLDLNGE---------DKNVCK*AE----TESCRRLYAIARRMYYYVCTNSKQL 87
           NS  VD DL G          D  +CK A+    T +C  L  I  ++    C N+KQL
Sbjct: 151 NSPLVDCDLKGGKCHKSPRPFDLTLCKLAKPGQVTPNCHYLTYITEKVIIITCNNTKQL 209



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>ADA24_MOUSE (Q9R160) ADAM 24 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 24) (Testase 1)
          Length = 761

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 270 LAGWLAVFLSSSSWPN--CTEVKGLPQ 344
           L  WL + L SS WP   C E KG P+
Sbjct: 16  LQAWLRMLLFSSVWPPTWCAEYKGPPE 42



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>DPOLA_DROME (P26019) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1488

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 21   NNVQLPLLQTAFLPYRERERKYKLFRVCTYII 116
            N+  LP +Q A    RER R+YK   +  Y+I
Sbjct: 1158 NSASLPHVQVALRMNRERNRRYKKGDMVDYVI 1189



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>SIP3_YEAST (P38717) Protein SIP3|
          Length = 1229

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 147 SSVCYCPKDVLLC-MYKLETTCIFSLSL 67
           S+ C+C KD + C M  +E  C+  +SL
Sbjct: 619 SATCFCTKDYIYCYMNSMEFICLTKISL 646


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,520,427
Number of Sequences: 219361
Number of extensions: 840768
Number of successful extensions: 2302
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2302
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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