>RNT_SALTY (P66684) Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)|
          Length = 215

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -2

Query: 243 LSAVAAATVQLAERAHLQGDRDVHGYHQEPDAGADTHP*WLAF 115
           L  +AA T+++ E+  L  D  +H +H EP AGA+  P  LAF
Sbjct: 36  LLEIAAITLKMDEQGWLMPDMTLH-FHVEPFAGANLQPEALAF 77

>RNT_SALTI (P66685) Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)|
          Length = 215

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -2

Query: 243 LSAVAAATVQLAERAHLQGDRDVHGYHQEPDAGADTHP*WLAF 115
           L  +AA T+++ E+  L  D  +H +H EP AGA+  P  LAF
Sbjct: 36  LLEIAAITLKMDEQGWLMPDMTLH-FHVEPFAGANLQPEALAF 77

>FA57A_HUMAN (Q8TBR7) Protein FAM57A (CT120 protein)|
          Length = 257

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -1

Query: 226 CNRAARRTRPSSGRSRCAWVSSRTRCWR*YPPLVASVHAWPTTFSSFVI 80
           C  A RR++P   R+ C  +S+R         LV+SVHA   T S  VI
Sbjct: 19  CTWALRRSQPGWSRTDCVMISTR---------LVSSVHAVLATGSGIVI 58

>HOLB_BUCAI (P57435) DNA polymerase III delta' subunit (EC 2.7.7.7)|
          Length = 326

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/74 (25%), Positives = 36/74 (48%)
 Frame = +1

Query: 25  KPHTDIIVKFLSSYICIYK*QKKRMLLAMHER*PLGVGISASIWFLMIPMHISISLKMGA 204
           KP+ +I+ ++          QKK+   A+  + P G+G+S  IWF+   +     + + +
Sbjct: 9   KPYNNIVQQY----------QKKKAHHAILIKTPRGIGVSLLIWFISKWLLCLKPIGLNS 58

Query: 205 FCELHGCSRDSAES 246
             + HGC   SA +
Sbjct: 59  CDKCHGCKLMSANN 72

>SYI_DEIRA (Q9RUP8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1078

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +1

Query: 166 IPMHISISLKMGAFCELHGCSRDSAE--SRMCATS 264
           +P+ IS+  K+G     HG SR+  E  +R+C TS
Sbjct: 94  LPVEISVEKKLGWLGRNHGASREELEEFNRLCRTS 128

>VP40_ILTVT (P23984) Capsid protein P40 [Contains: Capsid protein VP24|
           (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein
           VP22A; C-terminal peptide]
          Length = 586

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
 Frame = -2

Query: 372 AQRQRLRSPVPVRVDFVVRSDHPNDTELHGEAVSPRGSGAHPRLSAVAAATVQLAERAHL 193
           A+R   R PV    +F  RS         G  + PRG   HPRL +     +    R  L
Sbjct: 330 ARRDNDRRPVSPSREFSRRSRDSTHECSPGRDIWPRGFERHPRLESFMGPGMNHTYRPAL 389

Query: 192 QGDRDVHGY-----HQEPDAGADTHP*WLAFMHGQ 103
             D +  G      +Q P +    HP + +   GQ
Sbjct: 390 YEDPNFCGRFPYIPYQSPASTYPVHPNYYSSNFGQ 424

>NETB_DROME (Q24568) Netrin-B precursor|
          Length = 793

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 144 RQHLVLDDTHAHLDLPEDG 200
           ++HL LDD H HLD   DG
Sbjct: 312 KKHLELDDDHLHLDYASDG 330

>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase 2)
          Length = 3658

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 359 DSEAQFPSELISSCVATI-LMIQNCTEKQYHPAEVAHI 249
           +S+  FP + +   +  I L+++NCT KQ++ +   H+
Sbjct: 78  ESDPPFPKDAVLQVLRVIRLVLENCTNKQFYTSYEQHL 115

>HEMH_MYCAV (O07401) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 335

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 265 RKWRTS-STQRCRGCNRAARRTRPSSGR 185
           R WRTS     CRG +R  RRT P+  R
Sbjct: 22  RSWRTSPGAAACRGTSRPRRRTLPAFRR 49

>RESA_PLAFN (P13831) Ring-infected erythrocyte surface antigen (Fragment)|
          Length = 760

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = -3

Query: 281 KQYHPAEVAHILDSALSRLQPC----SSQNAPIFREIEMCMG 168
           +QY     AH+ +  L+ LQPC    S  N PI  ++E   G
Sbjct: 435 EQYQKEREAHVSEYLLNILQPCIAGDSKWNVPIITKLEGLKG 476

>RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen precursor|
          Length = 1073

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = -3

Query: 281 KQYHPAEVAHILDSALSRLQPC----SSQNAPIFREIEMCMG 168
           +QY     AH+ +  L+ LQPC    S  N PI  ++E   G
Sbjct: 649 EQYQKEREAHVSEYLLNILQPCIAGDSKWNVPIITKLEGLKG 690

>MMAC_MOUSE (Q9CZD0) Methylmalonic aciduria and homocystinuria type C homolog|
          Length = 279

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
 Frame = -2

Query: 363 QRLRSPVPVRVDFVVRSDHPNDTELHGEAVSPR--GSGAHPRLSAVAAATVQLAERAHLQ 190
           Q LR PV   V + +RS      E+H E ++         P++ A  AA V  A   + +
Sbjct: 73  QTLRDPVDQCVSYHLRSVTEKFPEVHMEVIADYEVHPNRRPKILAQTAAHVAGAAYYYQR 132

Query: 189 GDRDVHGYHQEPDAGADTHP 130
            D D   +  +  AG   HP
Sbjct: 133 QDVDADPWGTQHIAGVCIHP 152

>MK15_HUMAN (Q8TD08) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 8)
          Length = 544

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -2

Query: 276 VSPRGSGAHPRLSAVAAATVQLAERAHLQGD 184
           V P G GA P L++ AAA  Q+A +A ++GD
Sbjct: 444 VKPSGRGAAPSLTSQAAA--QVANQALIRGD 472

>PPK_ACIBA (Q9X4M8) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid|
           kinase) (ATP-polyphosphate phosphotransferase)
          Length = 692

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 16  LKYKPHTDIIVKFLSSYICIYK*QKKRMLLAMH 114
           L+Y+PHT +I K L     I+   +K+ +L  H
Sbjct: 321 LRYEPHTPVIPKILKKSANIFSAMQKQDILLHH 353

>GSC_DROME (P54366) Homeobox protein goosecoid|
          Length = 419

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = -2

Query: 243 LSAVAAATVQLAE-RAHLQGDR---DVHGYHQEPDAGADTHP*WLAFMHGQQH 97
           + A A A V  A+ +AH+ G       HG+H     G   HP   A  HGQ H
Sbjct: 221 MHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHH 273

>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (Protein archipelago)
          Length = 1326

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +2

Query: 218 TVAAATALSRGCAPLPRGDTASPCS--SVSLGWSLRTTK-STLTGTGLRSRCRWA 373
           +V + T+   GC+     +  + CS  S  LG S  +T  ST +G G  +RC++A
Sbjct: 537 SVGSQTSQESGCSRTTAINPTAACSTGSACLGDSQASTSASTSSGAGASNRCQYA 591


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,038,601
Number of Sequences: 219361
Number of extensions: 1107290
Number of successful extensions: 3398
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3398
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)