ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl19c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009089.1| Triticum aestivum clone wkm2c.pk0002.a3:fis, full insert mRNA sequence Length = 774 Score = 490 bits (247), Expect = e-135 Identities = 351/384 (91%), Gaps = 5/384 (1%) Strand = Plus / Minus Query: 19 gatatacaatttatgcggcacaaaatgtccaggatgagtatccctaga---aaattctga 75 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 695 gatatacaatttatgcggcacaaaatgtccaggttgagtatccctagaggaaaattctga 636 Query: 76 aaccaagaaactaacagcttaaatacggtaaagtagaagtaacacaataccaacacaata 135 ||||||||||||||||| ||||||||||| | || ||| | |||||| |||||||||| Sbjct: 635 aaccaagaaactaacagtttaaatacggtgatctaatagttatacaataacaacacaata 576 Query: 136 caattcacactaacttccatgaaacagcacagctgt--atgctcataactgaataatttt 193 ||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| Sbjct: 575 caattcacactaacttccatggaacagcacgcctgtgtatgctcataaccgaataatttt 516 Query: 194 gacggaatatccatccttaagttacccgtcacttacttgataagagactccatagcttca 253 ||||||||| | ||| | ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 515 gacggaataccgatcttcaagtttcccgtcacttaattgataagagactccatagcttca 456 Query: 254 aagaatagaggcacaaactccctgtttggagtcttcactgcacactttgcaccaagagca 313 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || || Sbjct: 455 aagaatagaggcacaaactccctgtttggagtcttgactgcacacttggcaccaggaaca 396 Query: 314 ccaacggcagcagtaagctctatcaggaatggaatcccacgggggatcttcgcagacaga 373 ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 395 ccaacagcagcagtaagctctatcagaaatggaatcccacgggggaccttcgcagacaga 336 Query: 374 tacagcacatccatatttgcattt 397 |||||||||||||| ||||||||| Sbjct: 335 tacagcacatccatgtttgcattt 312
>gb|AY109428.1| Zea mays CL501_1 mRNA sequence Length = 3187 Score = 111 bits (56), Expect = 2e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 236 agagactccatagcttcaaagaatagaggcacaaactccctgtttggagtcttcactgca 295 |||| |||||||||||||||||| ||||| || | |||||| ||||| || || |||||| Sbjct: 356 agagcctccatagcttcaaagaagagaggaaccatctccctatttggtgttttgactgca 415 Query: 296 cactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaatcccacgg 355 ||||| ||||| || ||||||| ||||| |||| |||||| ||||| || || |||||| Sbjct: 416 cacttcacaccaggaacaccaaccgcagctgtaacctctataaggaaggggattccacgg 475 Query: 356 gggatcttcgcagacagatacagcacatccat 387 || |||||||| || |||||||| |||||||| Sbjct: 476 ggcatcttcgcggagagatacagaacatccat 507
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 99.6 bits (50), Expect = 7e-18 Identities = 131/158 (82%) Strand = Plus / Plus Query: 228 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 287 |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| | Sbjct: 13561552 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13561611 Query: 288 tcactgcacactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaa 347 | || |||||||| | ||| || |||| || ||||||||||||||||||||||| || | Sbjct: 13561612 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 13561671 Query: 348 tcccacgggggatcttcgcagacagatacagcacatcc 385 | ||||| || ||||| ||||||| ||||| |||||| Sbjct: 13561672 ttccacgcggaatctttgcagacatgtacagaacatcc 13561709
>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0005A11, from chromosome 3, complete sequence Length = 168219 Score = 99.6 bits (50), Expect = 7e-18 Identities = 131/158 (82%) Strand = Plus / Plus Query: 228 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 287 |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| | Sbjct: 121443 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 121502 Query: 288 tcactgcacactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaa 347 | || |||||||| | ||| || |||| || ||||||||||||||||||||||| || | Sbjct: 121503 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 121562 Query: 348 tcccacgggggatcttcgcagacagatacagcacatcc 385 | ||||| || ||||| ||||||| ||||| |||||| Sbjct: 121563 ttccacgcggaatctttgcagacatgtacagaacatcc 121600
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 99.6 bits (50), Expect = 7e-18 Identities = 131/158 (82%) Strand = Plus / Plus Query: 228 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 287 |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| | Sbjct: 13557427 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13557486 Query: 288 tcactgcacactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaa 347 | || |||||||| | ||| || |||| || ||||||||||||||||||||||| || | Sbjct: 13557487 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 13557546 Query: 348 tcccacgggggatcttcgcagacagatacagcacatcc 385 | ||||| || ||||| ||||||| ||||| |||||| Sbjct: 13557547 ttccacgcggaatctttgcagacatgtacagaacatcc 13557584
>dbj|AK071247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087B10, full insert sequence Length = 1904 Score = 99.6 bits (50), Expect = 7e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 228 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 287 |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| | Sbjct: 1728 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1669 Query: 288 tcactgcacactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaa 347 | || |||||||| | ||| || |||| || ||||||||||||||||||||||| || | Sbjct: 1668 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 1609 Query: 348 tcccacgggggatcttcgcagacagatacagcacatcc 385 | ||||| || ||||| ||||||| ||||| |||||| Sbjct: 1608 ttccacgcggaatctttgcagacatgtacagaacatcc 1571
>dbj|AK069084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007F10, full insert sequence Length = 1842 Score = 99.6 bits (50), Expect = 7e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 228 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 287 |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| | Sbjct: 1479 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1420 Query: 288 tcactgcacactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaa 347 | || |||||||| | ||| || |||| || ||||||||||||||||||||||| || | Sbjct: 1419 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 1360 Query: 348 tcccacgggggatcttcgcagacagatacagcacatcc 385 | ||||| || ||||| ||||||| ||||| |||||| Sbjct: 1359 ttccacgcggaatctttgcagacatgtacagaacatcc 1322
>dbj|AK059077.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A07, full insert sequence Length = 834 Score = 99.6 bits (50), Expect = 7e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 228 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 287 |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| | Sbjct: 546 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 487 Query: 288 tcactgcacactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaa 347 | || |||||||| | ||| || |||| || ||||||||||||||||||||||| || | Sbjct: 486 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 427 Query: 348 tcccacgggggatcttcgcagacagatacagcacatcc 385 | ||||| || ||||| ||||||| ||||| |||||| Sbjct: 426 ttccacgcggaatctttgcagacatgtacagaacatcc 389
>dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D19, full insert sequence Length = 2979 Score = 93.7 bits (47), Expect = 4e-16 Identities = 125/151 (82%) Strand = Plus / Minus Query: 235 aagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtcttcactgc 294 |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| || || || Sbjct: 2706 aagagactccatggcttcgaagaagagagccaccatctccttgtttggagttttgaccgc 2647 Query: 295 acactttgcaccaagagcaccaacggcagcagtaagctctatcaggaatggaatcccacg 354 |||||| | ||| || |||| || ||||||||||||||||||||||| || || ||||| Sbjct: 2646 acacttcacgccaggaacaccgactgcagcagtaagctctatcaggaaggggattccacg 2587 Query: 355 ggggatcttcgcagacagatacagcacatcc 385 || ||||| ||||||| ||||| |||||| Sbjct: 2586 cggaatctttgcagacatgtacagaacatcc 2556
>gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, complete sequence Length = 95280 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 175 ctcataactgaataattttgac 196 |||||||||||||||||||||| Sbjct: 57533 ctcataactgaataattttgac 57512
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 acacaataccaacacaatacaa 138 |||||||||||||||||||||| Sbjct: 958722 acacaataccaacacaatacaa 958701
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 aaatgtccaggatgagtatccc 62 |||||||||||||||||||||| Sbjct: 7266918 aaatgtccaggatgagtatccc 7266897
>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0062A09 Length = 173541 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 aaatgtccaggatgagtatccc 62 |||||||||||||||||||||| Sbjct: 881 aaatgtccaggatgagtatccc 860
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 aaatgtccaggatgagtatccc 62 |||||||||||||||||||||| Sbjct: 119023 aaatgtccaggatgagtatccc 119002
>emb|AL583917.1|MLEPRTN1 Mycobacterium leprae strain TN complete genome; segment 1/10 Length = 344050 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 gcaccaagagcaccaacggca 322 ||||||||||||||||||||| Sbjct: 119698 gcaccaagagcaccaacggca 119678
>emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chromosome 4, complete sequence Length = 206914 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aaaggcaagatatacaattta 31 ||||||||||||||||||||| Sbjct: 50133 aaaggcaagatatacaattta 50153
>ref|NM_202601.1| Arabidopsis thaliana unknown protein AT3G17860 transcript variant AT3G17860.2 mRNA, complete cds Length = 1370 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1087 cacatccatatttgcatttc 1106
>ref|NM_112667.2| Arabidopsis thaliana unknown protein AT3G17860 transcript variant AT3G17860.1 mRNA, complete cds Length = 1580 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1297 cacatccatatttgcatttc 1316
>gb|U27724.1|SIU27724 Simian immunodeficiency virus 32H reisolate clone STV-13 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27723.1|SIU27723 Simian immunodeficiency virus 32H reisolate clone STV-12 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27722.1|SIU27722 Simian immunodeficiency virus 32H reisolate clone STV-11 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27721.1|SIU27721 Simian immunodeficiency virus 32H reisolate clone STV-10 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27720.1|SIU27720 Simian immunodeficiency virus 32H reisolate clone STV-9 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27718.1|SIU27718 Simian immunodeficiency virus 32H reisolate clone STV-7 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27717.1|SIU27717 Simian immunodeficiency virus 32H reisolate clone STV-6 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27716.1|SIU27716 Simian immunodeficiency virus 32H reisolate clone STV-5 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27715.1|SIU27715 Simian immunodeficiency virus 32H reisolate clone STV-4 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27714.1|SIU27714 Simian immunodeficiency virus 32H reisolate clone STV-3 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27713.1|SIU27713 Simian immunodeficiency virus 32H reisolate clone STV-2 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27712.1|SIU27712 Simian immunodeficiency virus 32H reisolate clone STV-1 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27607.1|SIU27607 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB10 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27606.1|SIU27606 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB9 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27605.1|SIU27605 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB8 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27604.1|SIU27604 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB7 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27603.1|SIU27603 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB6 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27602.1|SIU27602 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB5 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27601.1|SIU27601 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB4 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27600.1|SIU27600 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB3 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27599.1|SIU27599 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB2 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27598.1|SIU27598 Simian immunodeficiency virus 32H reisolate from CY077 clone 77PB1 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27597.1|SIU27597 Simian immunodeficiency virus 32H reisolate from CY094 clone 94PB1 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|U27596.1|SIU27596 Simian immunodeficiency virus 32H reisolate from CY093 clone 93PB1 envelope glycoprotein gp120 (env) mRNA, V1V2 region, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 73 gcaccaacagcaccaacggcagca 96
>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence Length = 165177 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 caataccaacacaatacaat 139 |||||||||||||||||||| Sbjct: 162707 caataccaacacaatacaat 162726
>gb|AC145791.2| Xenopus tropicalis clone CH216-136M10, complete sequence Length = 138176 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 cagcacatccatatttgcat 395 |||||||||||||||||||| Sbjct: 116229 cagcacatccatatttgcat 116248
>emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, complete sequence Length = 31143 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aattctgaaaccaagaaact 87 |||||||||||||||||||| Sbjct: 26630 aattctgaaaccaagaaact 26611
>gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complete sequence Length = 181588 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 acagcacatccatatttgcatttc 398 ||||||||| |||||||||||||| Sbjct: 135647 acagcacatacatatttgcatttc 135624
>emb|AL160159.12| Human DNA sequence from clone RP11-71K7 on chromosome 13, complete sequence Length = 129575 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tcaaaggcaagatatacaatttat 32 ||||||||||||| |||||||||| Sbjct: 29688 tcaaaggcaagatttacaatttat 29711
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 acttgataagagactccatagcttcaaagaatagag 263 |||||| |||||||||||| ||||| ||||| |||| Sbjct: 109697 acttgagaagagactccatggcttcgaagaagagag 109662
>emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 in linkage group 16, complete sequence Length = 165294 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtaaagtagaagtaacacaa 122 |||||||||||||||||||| Sbjct: 116674 gtaaagtagaagtaacacaa 116693
>gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct7-295g23, complete sequence Length = 115747 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ttccatgaaacagcacagct 169 |||||||||||||||||||| Sbjct: 33060 ttccatgaaacagcacagct 33041
>dbj|D01065.1|SIVMM32H Simian immunodeficiency virus proviral DNA for env, gag, nef, pol, rev, tat, vif, vpr, and vpx proteins, complete cds Length = 10277 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 6995 gcaccaacagcaccaacggcagca 7018
>dbj|AK136716.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched library, clone:9230028P05 product:unclassifiable, full insert sequence Length = 1057 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ttccatgaaacagcacagct 169 |||||||||||||||||||| Sbjct: 543 ttccatgaaacagcacagct 562
>dbj|AK222169.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-30-L21 Length = 1307 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1016 cacatccatatttgcatttc 1035
>gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's Hospital Oakland Research Institute) complete sequence Length = 228097 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ctagaaaattctgaaaccaa 81 |||||||||||||||||||| Sbjct: 16993 ctagaaaattctgaaaccaa 17012
>gb|AF372907.1|AF372907 Arabidopsis thaliana AT3g17860/MEB5_8 mRNA, complete cds Length = 1578 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1297 cacatccatatttgcatttc 1316
>tpg|BK001437.1| TPA: TPA_exp: Homo sapiens SULT6B1 (SULT6B1) gene, complete cds; alternatively spliced Length = 34001 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 atgctcataactgaataatt 191 |||||||||||||||||||| Sbjct: 22591 atgctcataactgaataatt 22610
>gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, region 51E-51F, BAC clone BACR16C17, complete sequence Length = 180425 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 caataccaacacaatacaat 139 |||||||||||||||||||| Sbjct: 48506 caataccaacacaatacaat 48525
>gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9, complete sequence Length = 191373 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaattctgaaaccaagaaa 85 |||||||||||||||||||| Sbjct: 33949 aaaattctgaaaccaagaaa 33968
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 acttgataagagactccatagcttcaaagaatagag 263 |||||| |||||||||||| ||||| ||||| |||| Sbjct: 16491598 acttgagaagagactccatggcttcgaagaagagag 16491563
>emb|BX822774.1|CNS0A63D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 976 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 812 cacatccatatttgcatttc 831
>emb|BX822297.1|CNS0A611 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1436 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1193 cacatccatatttgcatttc 1212
>emb|BX824913.1|CNS0A5NW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1327 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1087 cacatccatatttgcatttc 1106
>emb|BX824776.1|CNS0A5NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1454 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1228 cacatccatatttgcatttc 1247
>emb|BX822695.1|CNS0A5WD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1475 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1226 cacatccatatttgcatttc 1245
>emb|BX824527.1|CNS0A4QA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1492 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1238 cacatccatatttgcatttc 1257
>gb|AC007899.3| Homo sapiens BAC clone RP11-531C11 from 2, complete sequence Length = 118195 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 atgctcataactgaataatt 191 |||||||||||||||||||| Sbjct: 13587 atgctcataactgaataatt 13606
>gb|AY085082.1| Arabidopsis thaliana clone 12707 mRNA, complete sequence Length = 1535 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 1255 cacatccatatttgcatttc 1274
>emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chromosome 2, complete sequence Length = 213629 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ttccatgaaacagcacagct 169 |||||||||||||||||||| Sbjct: 57543 ttccatgaaacagcacagct 57524
>gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, complete sequence Length = 232529 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 agaggcacaaactccctgtt 279 |||||||||||||||||||| Sbjct: 146507 agaggcacaaactccctgtt 146488
>dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEB5 Length = 74968 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cacatccatatttgcatttc 398 |||||||||||||||||||| Sbjct: 33282 cacatccatatttgcatttc 33301
>dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G05, full insert sequence Length = 575 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 acttgataagagactccatagcttcaaagaatagag 263 |||||| |||||||||||| ||||| ||||| |||| Sbjct: 399 acttgagaagagactccatggcttcgaagaagagag 364
>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete sequence Length = 229685 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 caataccaacacaatacaat 139 |||||||||||||||||||| Sbjct: 133568 caataccaacacaatacaat 133587
>emb|AL132668.4|CNS01DT9 Human chromosome 14 DNA sequence BAC R-550M19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175725 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tagaggcacaaactccctgt 278 |||||||||||||||||||| Sbjct: 98529 tagaggcacaaactccctgt 98548
>emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in linkage group 16, complete sequence Length = 184760 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gtaaagtagaagtaacacaa 122 |||||||||||||||||||| Sbjct: 47402 gtaaagtagaagtaacacaa 47383 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gtaaagtagaagtaacacaa 122 |||||||||||||||||||| Sbjct: 46938 gtaaagtagaagtaacacaa 46919
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 acatccatatttgcatttct 399 |||||||||||||||||||| Sbjct: 1359986 acatccatatttgcatttct 1360005
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 acttgataagagactccatagcttcaaagaatagag 263 |||||| |||||||||||| ||||| ||||| |||| Sbjct: 16499839 acttgagaagagactccatggcttcgaagaagagag 16499804
>gb|AF041787.1|AF041787 Simian immunodeficiency virus clone 94PBm-8 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041786.1|AF041786 Simian immunodeficiency virus clone 94PBm-7 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041785.1|AF041785 Simian immunodeficiency virus clone 94PBm-6 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041784.1|AF041784 Simian immunodeficiency virus clone 94PBm-5 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041783.1|AF041783 Simian immunodeficiency virus clone 94PBm-4 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041782.1|AF041782 Simian immunodeficiency virus clone 94PBm-3 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041781.1|AF041781 Simian immunodeficiency virus clone 94PBm-2 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041780.1|AF041780 Simian immunodeficiency virus clone 94PBm-1 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041779.1|AF041779 Simian immunodeficiency virus clone 77VW4 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041777.1|AF041777 Simian immunodeficiency virus clone 77VW2 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041776.1|AF041776 Simian immunodeficiency virus clone 77VW1 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041775.1|AF041775 Simian immunodeficiency virus clone 93PBm-8 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041773.1|AF041773 Simian immunodeficiency virus clone 93PBm-6 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041772.1|AF041772 Simian immunodeficiency virus clone 93PBm-5 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041771.1|AF041771 Simian immunodeficiency virus clone 93PBm-4 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041770.1|AF041770 Simian immunodeficiency virus clone 93PBm-3 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041769.1|AF041769 Simian immunodeficiency virus clone 93PBm-2 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041768.1|AF041768 Simian immunodeficiency virus clone 93PBm-1 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041767.1|AF041767 Simian immunodeficiency virus clone 94VWm-3 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041766.1|AF041766 Simian immunodeficiency virus clone 94VWm-2 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041765.1|AF041765 Simian immunodeficiency virus clone 94VWm-1 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041764.1|AF041764 Simian immunodeficiency virus clone 94VW6 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041763.1|AF041763 Simian immunodeficiency virus clone 94VW5 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041762.1|AF041762 Simian immunodeficiency virus clone 94VW4 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041761.1|AF041761 Simian immunodeficiency virus clone 94VW3 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041760.1|AF041760 Simian immunodeficiency virus clone 94VW2 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041759.1|AF041759 Simian immunodeficiency virus clone 94VW1 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041758.1|AF041758 Simian immunodeficiency virus clone 93VWm-6 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041757.1|AF041757 Simian immunodeficiency virus clone 93VWm-5 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041756.1|AF041756 Simian immunodeficiency virus clone 93VWm-4 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041755.1|AF041755 Simian immunodeficiency virus clone 93VWm-3 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041754.1|AF041754 Simian immunodeficiency virus clone 93VWm-2 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041753.1|AF041753 Simian immunodeficiency virus clone 93VWm-1 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041752.1|AF041752 Simian immunodeficiency virus clone 93VW5 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041751.1|AF041751 Simian immunodeficiency virus clone 93VW4 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041749.1|AF041749 Simian immunodeficiency virus clone 93VW2 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|AF041748.1|AF041748 Simian immunodeficiency virus clone 93VW1 glycoprotein 120 (env) gene, partial cds Length = 338 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L35597.1|SIVENVGLYB Simian immunodeficiency virus (clone 11) proviral envelope glycoprotein (env) gene, complete cds Length = 2637 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>gb|M74944.1|SIVW9GP120 Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, clone W9) env gene, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>gb|M74942.1|SIVW7GP120 Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, clone W7) env gene, 5' end Length = 562 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>gb|M74940.1|SIVW5GP120 Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, clone W5) env gene, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>gb|M74939.1|SIVW4GP120 Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, clone W4) env gene, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>gb|M74937.1|SIVW2GP120 Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, clone W2) env gene, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>gb|M74936.1|SIVW1GP120 Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, clone W1) env gene, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chromosome 2, complete sequence Length = 233417 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ttccatgaaacagcacagct 169 |||||||||||||||||||| Sbjct: 85626 ttccatgaaacagcacagct 85645
>gb|L06367.1|SIVVRAZ Simian immunodeficiency virus (clone BM7) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06364.1|SIVVRAW Simian immunodeficiency virus (clone BM4) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05126.1|SIVVRP Simian immunodeficiency virus (BL11) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05124.1|SIVVRN Simian immunodeficiency virus (BL3) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05123.1|SIVVRM Simian immunodeficiency virus (BL2) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05116.1|SIVVRF Simian immunodeficiency virus (BM1) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05115.1|SIVVRE Simian immunodeficiency virus (BM10) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05114.1|SIVVRD Simian immunodeficiency virus (BM11) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05113.1|SIVVRC Simian immunodeficiency virus (BM12) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06378.1|SIVVRBL Simian immunodeficiency virus (clone BI7) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06377.1|SIVVRBK Simian immunodeficiency virus (clone BI8) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06376.1|SIVVRBJ Simian immunodeficiency virus (clone BI9) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06375.1|SIVVRBH Simian immunodeficiency virus (clone BI5) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06374.1|SIVVRBG Simian immunodeficiency virus (clone BI3) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06373.1|SIVVRBF Simian immunodeficiency virus (clone BI12) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06372.1|SIVVRBE Simian immunodeficiency virus (clone BI11) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06371.1|SIVVRBD Simian immunodeficiency virus (clone BI10) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06370.1|SIVVRBC Simian immunodeficiency virus (clone BI1) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06369.1|SIVVRBB Simian immunodeficiency virus (clone BM6) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06368.1|SIVVRBA Simian immunodeficiency virus (clone BM9) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L05112.1|SIVVRB Simian immunodeficiency virus (BM2) envelope glycoprotein (env) gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06366.1|SIVVRAY Simian immunodeficiency virus (clone BM8) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06365.1|SIVVRAX Simian immunodeficiency virus (clone BM5) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06363.1|SIVVRAV Simian immunodeficiency virus (clone BM3) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06362.1|SIVVRAU Simian immunodeficiency virus (clone BG5) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06358.1|SIVVRAQ Simian immunodeficiency virus (clone BG6) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06357.1|SIVVRAP Simian immunodeficiency virus (clone BG4) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06356.1|SIVVRAN Simian immunodeficiency virus (clone BG3) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06355.1|SIVVRAM Simian immunodeficiency virus (clone BG2) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|L06353.1|SIVVRAK Simian immunodeficiency virus (clone BG11) proviral glycoprotein 120 (env) gene, partial cds including V1 and V2 regions Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M74941.1|SIVW6GP120 Simian immunodeficiency virus (32H Re-isolate of SIVmac 251, clone W6) env gene, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 391 gcaccaacagcaccaacggcagca 414
>gb|M92715.1|SIV227BF4 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227 clone BF4) gp120 (V1, V2) RNA, partial cds Length = 363 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92712.1|SIV227BF20 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227 clone BF20) gp120 (V1, V2) RNA, partial cds Length = 363 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92701.1|SIV227BD13 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I227 clone BD13) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92695.1|SIV225BA8 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA8) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92703.1|SIV225BA7 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA7) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92690.1|SIV225BA6 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA6) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92691.1|SIV225BA5 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA5) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92689.1|SIV225BA3 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA3) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92692.1|SIV225BA16 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA16) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92688.1|SIV225BA12 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA12) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92687.1|SIV225BA11 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA11) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92662.1|SIV225BA10 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA10) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92663.1|SIV225BA1 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone BA1) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92676.1|SIV225AY6 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone AY6) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92685.1|SIV225AY12 Simian immunodeficiency virus (32H reisolate of SIVmac251 from I225 clone AY12) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92728.1|SIV1188W16 Simian immunodeficiency virus (32H reisolate of SIVmac251 from 11/88 pool clone W16) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92729.1|SIV1188W15 Simian immunodeficiency virus (32H reisolate of SIVmac251 from 11/88 pool clone W15) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92730.1|SIV1188W14 Simian immunodeficiency virus (32H reisolate of SIVmac251 from 11/88 pool clone W14) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92732.1|SIV1188W12 Simian immunodeficiency virus (32H reisolate of SIVmac251 from 11/88 pool, clone W12) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92733.1|SIV1188W11 Simian immunodeficiency virus (32H reisolate of SIVmac251 from 11/88 pool, clone W11) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78
>gb|M92734.1|SIV1188W10 Simian immunodeficiency virus (32H reisolate of SIVmac251 from 11/88 pool, clone W10) gp120 (V1, V2) RNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gcaccaagagcaccaacggcagca 325 ||||||| |||||||||||||||| Sbjct: 55 gcaccaacagcaccaacggcagca 78 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,692,758 Number of Sequences: 3902068 Number of extensions: 3692758 Number of successful extensions: 68899 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68593 Number of HSP's gapped (non-prelim): 303 length of query: 402 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 380 effective length of database: 17,147,199,772 effective search space: 6515935913360 effective search space used: 6515935913360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
