Clone Name | rbastl19c01 |
---|---|
Clone Library Name | barley_pub |
>gb|BT016645.1| Zea mays clone Contig478 mRNA sequence Length = 1606 Score = 236 bits (119), Expect = 5e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 218 tcttcaaatgttgcttgaaatccatgatatcaccttcccacctagtcaccgcctggttct 277 ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1385 tcttcaagtgtgccttgaaatccatgatatcaccttcccaccttgtcaccgcctgattct 1326 Query: 278 cacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcaccagga 337 |||| ||||| |||||||| |||||||| |||||||||||||| ||||||||||||| || Sbjct: 1325 cacacacccaaatctcttgagcaacctggttgatcagcctgaaatcatggctcaccaaga 1266 Query: 338 ccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaa 397 |||| || || ||||| || ||||||||||| || || ||||| |||||||||||||| | Sbjct: 1265 ccaaaccaccatcccactcattcagtgcctccgccagggagtcaatggtctcaatgtcca 1206 Query: 398 gatgatttgtcggctcatcaagcaacagcatctgtggctgcctaaatgctagccaagcaa 457 |||||||||||||||||| |||| |||| || ||||||||| |||| | ||| |||| Sbjct: 1205 aatgatttgtcggctcatcgagcagtagcagttgcggctgcctatatgccaaccatgcaa 1146 Query: 458 aaatgacacgg 468 | ||||||||| Sbjct: 1145 agatgacacgg 1135
>gb|AY103960.1| Zea mays PCO139646 mRNA sequence Length = 2066 Score = 236 bits (119), Expect = 5e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 218 tcttcaaatgttgcttgaaatccatgatatcaccttcccacctagtcaccgcctggttct 277 ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1807 tcttcaagtgtgccttgaaatccatgatatcaccttcccaccttgtcaccgcctgattct 1748 Query: 278 cacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcaccagga 337 |||| ||||| |||||||| |||||||| |||||||||||||| ||||||||||||| || Sbjct: 1747 cacacacccaaatctcttgagcaacctggttgatcagcctgaaatcatggctcaccaaga 1688 Query: 338 ccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaa 397 |||| || || ||||| || ||||||||||| || || ||||| |||||||||||||| | Sbjct: 1687 ccaaaccaccatcccactcattcagtgcctccgccagggagtcaatggtctcaatgtcca 1628 Query: 398 gatgatttgtcggctcatcaagcaacagcatctgtggctgcctaaatgctagccaagcaa 457 |||||||||||||||||| |||| |||| || ||||||||| |||| | ||| |||| Sbjct: 1627 aatgatttgtcggctcatcgagcagtagcagttgcggctgcctatatgccaaccatgcaa 1568 Query: 458 aaatgacacgg 468 | ||||||||| Sbjct: 1567 agatgacacgg 1557
>ref|XM_483817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1976 Score = 218 bits (110), Expect = 1e-53 Identities = 185/210 (88%) Strand = Plus / Minus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1802 cttgaagtccatgatatcaccttcccacctggtcaccgcctgcttctcgcacacccaaat 1743 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 |||||| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 1742 ctcttgagcaacctggttgataagcctgaagtcatgactcaccaggaccaaaccaccgtc 1683 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 ||| || |||||||||||||| || || ||||||||||||||||| ||||| || ||||| Sbjct: 1682 ccactcgttcagtgcctcagccagagaatcgatggtctcaatgtccagatggttcgtcgg 1623 Query: 411 ctcatcaagcaacagcatctgtggctgcct 440 ||| ||||||| ||||| || |||||||| Sbjct: 1622 ctcgtcaagcagcagcagttgaggctgcct 1593 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaa 422 |||||||| ||||| |||||||||||||| Sbjct: 781 tcaagatggtttgttggctcatcaagcaa 753
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 218 bits (110), Expect = 1e-53 Identities = 185/210 (88%) Strand = Plus / Plus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 28243568 cttgaagtccatgatatcaccttcccacctggtcaccgcctgcttctcgcacacccaaat 28243627 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 |||||| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 28243628 ctcttgagcaacctggttgataagcctgaagtcatgactcaccaggaccaaaccaccgtc 28243687 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 ||| || |||||||||||||| || || ||||||||||||||||| ||||| || ||||| Sbjct: 28243688 ccactcgttcagtgcctcagccagagaatcgatggtctcaatgtccagatggttcgtcgg 28243747 Query: 411 ctcatcaagcaacagcatctgtggctgcct 440 ||| ||||||| ||||| || |||||||| Sbjct: 28243748 ctcgtcaagcagcagcagttgaggctgcct 28243777 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 caagatgatttgtcggctcatcaagcaa 422 ||||||| ||||| |||||||||||||| Sbjct: 28245149 caagatggtttgttggctcatcaagcaa 28245176
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 218 bits (110), Expect = 1e-53 Identities = 185/210 (88%) Strand = Plus / Plus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 35383 cttgaagtccatgatatcaccttcccacctggtcaccgcctgcttctcgcacacccaaat 35442 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 |||||| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 35443 ctcttgagcaacctggttgataagcctgaagtcatgactcaccaggaccaaaccaccgtc 35502 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 ||| || |||||||||||||| || || ||||||||||||||||| ||||| || ||||| Sbjct: 35503 ccactcgttcagtgcctcagccagagaatcgatggtctcaatgtccagatggttcgtcgg 35562 Query: 411 ctcatcaagcaacagcatctgtggctgcct 440 ||| ||||||| ||||| || |||||||| Sbjct: 35563 ctcgtcaagcagcagcagttgaggctgcct 35592 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 caagatgatttgtcggctcatcaagcaa 422 ||||||| ||||| |||||||||||||| Sbjct: 36964 caagatggtttgttggctcatcaagcaa 36991
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 218 bits (110), Expect = 1e-53 Identities = 185/210 (88%) Strand = Plus / Plus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 127041 cttgaagtccatgatatcaccttcccacctggtcaccgcctgcttctcgcacacccaaat 127100 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 |||||| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 127101 ctcttgagcaacctggttgataagcctgaagtcatgactcaccaggaccaaaccaccgtc 127160 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 ||| || |||||||||||||| || || ||||||||||||||||| ||||| || ||||| Sbjct: 127161 ccactcgttcagtgcctcagccagagaatcgatggtctcaatgtccagatggttcgtcgg 127220 Query: 411 ctcatcaagcaacagcatctgtggctgcct 440 ||| ||||||| ||||| || |||||||| Sbjct: 127221 ctcgtcaagcagcagcagttgaggctgcct 127250 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 caagatgatttgtcggctcatcaagcaa 422 ||||||| ||||| |||||||||||||| Sbjct: 128622 caagatggtttgttggctcatcaagcaa 128649
>dbj|AK063258.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A02, full insert sequence Length = 1976 Score = 218 bits (110), Expect = 1e-53 Identities = 185/210 (88%) Strand = Plus / Minus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1802 cttgaagtccatgatatcaccttcccacctggtcaccgcctgcttctcgcacacccaaat 1743 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 |||||| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 1742 ctcttgagcaacctggttgataagcctgaagtcatgactcaccaggaccaaaccaccgtc 1683 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 ||| || |||||||||||||| || || ||||||||||||||||| ||||| || ||||| Sbjct: 1682 ccactcgttcagtgcctcagccagagaatcgatggtctcaatgtccagatggttcgtcgg 1623 Query: 411 ctcatcaagcaacagcatctgtggctgcct 440 ||| ||||||| ||||| || |||||||| Sbjct: 1622 ctcgtcaagcagcagcagttgaggctgcct 1593 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaa 422 |||||||| ||||| |||||||||||||| Sbjct: 781 tcaagatggtttgttggctcatcaagcaa 753
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 163 bits (82), Expect = 6e-37 Identities = 175/206 (84%) Strand = Plus / Plus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| |||||||| |||||||||||||| ||||||||||| || || || ||||| || Sbjct: 22582503 cttgaactccatgatgtcaccttcccacctggtcaccgcctgcttttcgcacacccatat 22582562 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 ||| || || || || ||||||||||||||||||||||||||||| || | ||| || || Sbjct: 22582563 ctcctgcgccacttggttgatcagcctgaagtcatggctcaccagcacaagccctccatc 22582622 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 |||||| ||||| ||||| ||||| |||||||| || |||||||| ||||| || || || Sbjct: 22582623 ccattcattcagcgcctctgcaagagagtcgattgtttcaatgtccagatggttcgttgg 22582682 Query: 411 ctcatcaagcaacagcatctgtggct 436 |||||| |||| |||||| ||||||| Sbjct: 22582683 ctcatccagcagcagcatgtgtggct 22582708
>dbj|AP006450.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1130E07 Length = 152245 Score = 163 bits (82), Expect = 6e-37 Identities = 175/206 (84%) Strand = Plus / Plus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| |||||||| |||||||||||||| ||||||||||| || || || ||||| || Sbjct: 24423 cttgaactccatgatgtcaccttcccacctggtcaccgcctgcttttcgcacacccatat 24482 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 ||| || || || || ||||||||||||||||||||||||||||| || | ||| || || Sbjct: 24483 ctcctgcgccacttggttgatcagcctgaagtcatggctcaccagcacaagccctccatc 24542 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 |||||| ||||| ||||| ||||| |||||||| || |||||||| ||||| || || || Sbjct: 24543 ccattcattcagcgcctctgcaagagagtcgattgtttcaatgtccagatggttcgttgg 24602 Query: 411 ctcatcaagcaacagcatctgtggct 436 |||||| |||| |||||| ||||||| Sbjct: 24603 ctcatccagcagcagcatgtgtggct 24628
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 163 bits (82), Expect = 6e-37 Identities = 175/206 (84%) Strand = Plus / Plus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| |||||||| |||||||||||||| ||||||||||| || || || ||||| || Sbjct: 97704 cttgaactccatgatgtcaccttcccacctggtcaccgcctgcttttcgcacacccatat 97763 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 ||| || || || || ||||||||||||||||||||||||||||| || | ||| || || Sbjct: 97764 ctcctgcgccacttggttgatcagcctgaagtcatggctcaccagcacaagccctccatc 97823 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 |||||| ||||| ||||| ||||| |||||||| || |||||||| ||||| || || || Sbjct: 97824 ccattcattcagcgcctctgcaagagagtcgattgtttcaatgtccagatggttcgttgg 97883 Query: 411 ctcatcaagcaacagcatctgtggct 436 |||||| |||| |||||| ||||||| Sbjct: 97884 ctcatccagcagcagcatgtgtggct 97909
>dbj|AK069041.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004J15, full insert sequence Length = 2427 Score = 155 bits (78), Expect = 2e-34 Identities = 174/206 (84%) Strand = Plus / Minus Query: 231 cttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagat 290 |||||| |||||||| |||||||||||||| ||||||||||| || || || ||||| | Sbjct: 1764 cttgaactccatgatgtcaccttcccacctggtcaccgcctgcttttcgcacacccatac 1705 Query: 291 ctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtc 350 ||| || || || || ||||||||||||||||||||||||||||| || | ||| || || Sbjct: 1704 ctcctgcgccacttggttgatcagcctgaagtcatggctcaccagcacaagccctccatc 1645 Query: 351 ccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcgg 410 |||||| ||||| ||||| ||||| |||||||| || |||||||| ||||| || || || Sbjct: 1644 ccattcattcagcgcctctgcaagagagtcgattgtttcaatgtccagatggttcgttgg 1585 Query: 411 ctcatcaagcaacagcatctgtggct 436 |||||| |||| |||||| ||||||| Sbjct: 1584 ctcatccagcagcagcatgtgtggct 1559
>gb|BT013696.1| Lycopersicon esculentum clone 132537R, mRNA sequence Length = 2395 Score = 71.9 bits (36), Expect = 2e-09 Identities = 189/240 (78%) Strand = Plus / Minus Query: 219 cttcaaatgttgcttgaaatccatgatatcaccttcccacctagtcaccgcctggttctc 278 |||||||||| ||||||| ||||| || ||||| | ||||| ||||| | | || || Sbjct: 1871 cttcaaatgtagcttgaagtccataatgtcacccttccaccgtgtcacagttttattttc 1812 Query: 279 acagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcaccaggac 338 ||| ||||| ||||| ||||| ||||| || || |||||||| ||||| || || || || Sbjct: 1811 acatacccatatctcatgggcgacctggtttatgagcctgaaatcatgactaacaagaac 1752 Query: 339 caaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaag 398 || || || |||||||| |||| ||||| ||||||||||| || |||||||| || || Sbjct: 1751 cattccaccatcccattcattcaaagcctcggcaagtgagtcaattgtctcaatatcgag 1692 Query: 399 atgatttgtcggctcatcaagcaacagcatctgtggctgcctaaatgctagccaagcaaa 458 ||| || || |||||||| || | |||||| || || || ||||| |||| ||| ||||| Sbjct: 1691 atggttggttggctcatcgagaagcagcatgtgaggttgtctaaaagctaaccacgcaaa 1632
>gb|BC046677.1| Xenopus laevis ATP-binding cassette, sub-family F (GCN20), member 2, mRNA (cDNA clone MGC:53054 IMAGE:5541854), complete cds Length = 2270 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 255 ccacctagtcaccgcctggttctcacagacccagatctcttgggcaacctgattgatcag 314 |||| ||||||| ||||| |||||||||||||| ||||| ||||||||||| | ||| || Sbjct: 1787 ccacttagtcactgcctgtttctcacagacccaaatctcctgggcaacctgctggatgag 1728 Query: 315 cctgaagtcatggct 329 || |||||| ||||| Sbjct: 1727 ccggaagtcgtggct 1713
>ref|NM_125472.2| Arabidopsis thaliana ATGCN1 AT5G60790 (ATGCN1) mRNA, complete cds Length = 2387 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||| ||||| || || || || ||||||| ||||||||| || || ||| Sbjct: 1806 ttctcgcaaacccatatctcatgagccacttggttgatcaacctgaagtcgtgactaacc 1747 Query: 334 aggaccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatg 393 || ||||| || || ||||| || |||| |||||||||||| |||||||| ||||| || Sbjct: 1746 agaaccaaaccaccatcccactcattcaatgcctcagcaagcgagtcgattgtctcgata 1687 Query: 394 tcaagatgatttgtcggctcatcaag 419 || | ||| || || ||||||||||| Sbjct: 1686 tccaaatggttagtaggctcatcaag 1661 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaagcaa 422 |||||| ||||||||||||||||| Sbjct: 823 atgattagtcggctcatcaagcaa 800
>gb|BT000946.1| Arabidopsis thaliana clone C105151 putative ABC transporter homolog PnATH (At5g60790) mRNA, complete cds Length = 1819 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||| ||||| || || || || ||||||| ||||||||| || || ||| Sbjct: 1709 ttctcgcaaacccatatctcatgagccacttggttgatcaacctgaagtcgtgactaacc 1650 Query: 334 aggaccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatg 393 || ||||| || || ||||| || |||| |||||||||||| |||||||| ||||| || Sbjct: 1649 agaaccaaaccaccatcccactcattcaatgcctcagcaagcgagtcgattgtctcgata 1590 Query: 394 tcaagatgatttgtcggctcatcaag 419 || | ||| || || ||||||||||| Sbjct: 1589 tccaaatggttagtaggctcatcaag 1564 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaagcaa 422 |||||| ||||||||||||||||| Sbjct: 726 atgattagtcggctcatcaagcaa 703
>gb|AY080833.1| Arabidopsis thaliana At5g60790 mRNA sequence Length = 2343 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||| ||||| || || || || ||||||| ||||||||| || || ||| Sbjct: 1795 ttctcgcaaacccatatctcatgagccacttggttgatcaacctgaagtcgtgactaacc 1736 Query: 334 aggaccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatg 393 || ||||| || || ||||| || |||| |||||||||||| |||||||| ||||| || Sbjct: 1735 agaaccaaaccaccatcccactcattcaatgcctcagcaagcgagtcgattgtctcgata 1676 Query: 394 tcaagatgatttgtcggctcatcaag 419 || | ||| || || ||||||||||| Sbjct: 1675 tccaaatggttagtaggctcatcaag 1650 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaagcaa 422 |||||| ||||||||||||||||| Sbjct: 812 atgattagtcggctcatcaagcaa 789
>gb|BT008363.1| Arabidopsis thaliana At5g60790 gene, complete cds Length = 1788 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||| ||||| || || || || ||||||| ||||||||| || || ||| Sbjct: 1709 ttctcgcaaacccatatctcatgagccacttggttgatcaacctgaagtcgtgactaacc 1650 Query: 334 aggaccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatg 393 || ||||| || || ||||| || |||| |||||||||||| |||||||| ||||| || Sbjct: 1649 agaaccaaaccaccatcccactcattcaatgcctcagcaagcgagtcgattgtctcgata 1590 Query: 394 tcaagatgatttgtcggctcatcaag 419 || | ||| || || ||||||||||| Sbjct: 1589 tccaaatggttagtaggctcatcaag 1564 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaagcaa 422 |||||| ||||||||||||||||| Sbjct: 726 atgattagtcggctcatcaagcaa 703
>gb|AY140066.1| Arabidopsis thaliana ABC transporter homolog PnATH-like protein (At5g60790) mRNA, complete cds Length = 2287 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||| ||||| || || || || ||||||| ||||||||| || || ||| Sbjct: 1806 ttctcgcaaacccatatctcatgagccacttggttgatcaacctgaagtcgtgactaacc 1747 Query: 334 aggaccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatg 393 || ||||| || || ||||| || |||| |||||||||||| |||||||| ||||| || Sbjct: 1746 agaaccaaaccaccatcccactcattcaatgcctcagcaagcgagtcgattgtctcgata 1687 Query: 394 tcaagatgatttgtcggctcatcaag 419 || | ||| || || ||||||||||| Sbjct: 1686 tccaaatggttagtaggctcatcaag 1661 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaagcaa 422 |||||| ||||||||||||||||| Sbjct: 823 atgattagtcggctcatcaagcaa 800
>gb|AC182672.2| Populus trichocarpa chromosome Pop1-25F8, complete sequence Length = 31465 Score = 67.9 bits (34), Expect = 3e-08 Identities = 127/158 (80%) Strand = Plus / Minus Query: 301 acctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtcccattccttc 360 |||||||| || |||||||| |||||||| || || || | ||||| ||||| || ||| Sbjct: 2023 acctgatttatgagcctgaaatcatggctaacaagaacaagacccccatcccactcattc 1964 Query: 361 agtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcggctcatcaagc 420 | ||||||||| || ||||| || |||||||| || | ||| ||||| |||||||| ||| Sbjct: 1963 aatgcctcagccagagagtcaatcgtctcaatatccaaatggtttgttggctcatccagc 1904 Query: 421 aacagcatctgtggctgcctaaatgctagccaagcaaa 458 | |||| || ||||||||| | || ||||||||||| Sbjct: 1903 agtagcaagtggggctgcctatacgccagccaagcaaa 1866
>dbj|AB015472.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAE1 Length = 54632 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Plus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||| ||||| || || || || ||||||| ||||||||| || || ||| Sbjct: 19042 ttctcgcaaacccatatctcatgagccacttggttgatcaacctgaagtcgtgactaacc 19101 Query: 334 aggaccaaccccccgtcccattccttcagtgcctcagcaagtgagtcgatggtctcaatg 393 || ||||| || || ||||| || |||| |||||||||||| |||||||| ||||| || Sbjct: 19102 agaaccaaaccaccatcccactcattcaatgcctcagcaagcgagtcgattgtctcgata 19161 Query: 394 tcaagatgatttgtcggctcatcaag 419 || | ||| || || ||||||||||| Sbjct: 19162 tccaaatggttagtaggctcatcaag 19187 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 atgatttgtcggctcatcaagcaa 422 |||||| ||||||||||||||||| Sbjct: 20111 atgattagtcggctcatcaagcaa 20134
>gb|AY496966.1| Pteris vittata ATP-binding cassette transporter (ABCT1) mRNA, complete cds Length = 2165 Score = 67.9 bits (34), Expect = 3e-08 Identities = 151/190 (79%) Strand = Plus / Minus Query: 232 ttgaaatccatgatatcaccttcccacctagtcaccgcctggttctcacagacccagatc 291 ||||| ||||| || |||||||||||||| | ||| | ||||||||||| ||||||||| Sbjct: 1925 ttgaagtccataatgtcaccttcccaccttgacactgtttggttctcacaaacccagatc 1866 Query: 292 tcttgggcaacctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtcc 351 || | ||| ||||| ||||| ||||| || ||||| | ||| || || | ||| || ||| Sbjct: 1865 tccttggccacctggttgataagcctaaaatcatgacccacaagcacaagccctccatcc 1806 Query: 352 cattccttcagtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcggc 411 ||||| || | ||| ||||| | | || || |||||||| ||||||||||| || || Sbjct: 1805 cattcatttaatgcatcagccaaagcatctattgtctcaatatcaagatgattcgtaggt 1746 Query: 412 tcatcaagca 421 |||||||||| Sbjct: 1745 tcatcaagca 1736
>ref|XM_865850.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F, member 2 isoform b (LOC614368), mRNA Length = 612 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | ||| || |||||||||||||| ||| Sbjct: 386 ttctcacagacccagatttcctgtgcaacctgttggatgagtctgaagtcatggctgacc 327 Query: 334 ag 335 || Sbjct: 326 ag 325
>gb|BT025348.1| Bos taurus ATP-binding cassette, sub-family F (GCN20), member 2 (ABCF2), nuclear gene encoding mitochondrial protein, mRNA, complete cds Length = 2445 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | ||| || |||||||||||||| ||| Sbjct: 1854 ttctcacagacccagatttcctgtgcaacctgttggatgagtctgaagtcatggctgacc 1795 Query: 334 ag 335 || Sbjct: 1794 ag 1793
>ref|XM_874164.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F (GCN20), member 2, transcript variant 5 (LOC513061), mRNA Length = 1992 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | ||| || |||||||||||||| ||| Sbjct: 1403 ttctcacagacccagatttcctgtgcaacctgttggatgagtctgaagtcatggctgacc 1344 Query: 334 ag 335 || Sbjct: 1343 ag 1342
>ref|XM_874074.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F (GCN20), member 2, transcript variant 4 (LOC513061), mRNA Length = 2274 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | ||| || |||||||||||||| ||| Sbjct: 1685 ttctcacagacccagatttcctgtgcaacctgttggatgagtctgaagtcatggctgacc 1626 Query: 334 ag 335 || Sbjct: 1625 ag 1624
>ref|XM_590684.2| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F (GCN20), member 2, transcript variant 1 (LOC513061), mRNA Length = 2364 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | ||| || |||||||||||||| ||| Sbjct: 1775 ttctcacagacccagatttcctgtgcaacctgttggatgagtctgaagtcatggctgacc 1716 Query: 334 ag 335 || Sbjct: 1715 ag 1714
>ref|XM_873889.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F (GCN20), member 2, transcript variant 3 (LOC513061), mRNA Length = 1432 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | ||| || |||||||||||||| ||| Sbjct: 843 ttctcacagacccagatttcctgtgcaacctgttggatgagtctgaagtcatggctgacc 784 Query: 334 ag 335 || Sbjct: 783 ag 782
>gb|BC105443.1| Bos taurus similar to ATP-binding cassette, sub-family F (GCN20), member 2, mRNA (cDNA clone MGC:128735 IMAGE:7988111), complete cds Length = 2445 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | ||| || |||||||||||||| ||| Sbjct: 1835 ttctcacagacccagatttcctgtgcaacctgttggatgagtctgaagtcatggctgacc 1776 Query: 334 ag 335 || Sbjct: 1775 ag 1774
>gb|BC003300.1| Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2, mRNA (cDNA clone MGC:7932 IMAGE:3583837), complete cds Length = 2488 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1831 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 1776
>ref|NM_013853.1| Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2 (Abcf2), mRNA Length = 2488 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1831 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 1776
>emb|AJ719522.1| Gallus gallus mRNA for hypothetical protein, clone 2p22 Length = 2420 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||||||||| || |||||||| | ||| || |||||||| ||||| Sbjct: 1828 ttctcacagacccagatctcctgagcaacctgctggatgagtctgaagtcgtggct 1773
>ref|NM_001006562.1| Gallus gallus ATP-binding cassette, sub-family F (GCN20), member 2 (ABCF2), mRNA Length = 2420 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||||||||| || |||||||| | ||| || |||||||| ||||| Sbjct: 1828 ttctcacagacccagatctcctgagcaacctgctggatgagtctgaagtcgtggct 1773
>dbj|AK137233.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530059E24 product:ATP-binding cassette, sub-family F (GCN20), member 2, full insert sequence Length = 2502 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1871 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 1816
>dbj|AK147937.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270109C21 product:ATP-binding cassette, sub-family F (GCN20), member 2, full insert sequence Length = 2529 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1894 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 1839
>dbj|AK151545.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031J05 product:ATP-binding cassette, sub-family F (GCN20), member 2, full insert sequence Length = 2525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1895 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 1840
>dbj|AK087990.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430001O06 product:ATP-BINDING CASSETTE, SUB-FAMILY F, MEMBER 2 (IRON INHIBITED ABC TRANSPORTER 2) homolog [Homo sapiens], full insert sequence Length = 2473 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1841 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 1786
>ref|XM_231307.3| PREDICTED: Rattus norvegicus ATP-binding cassette, sub-family F (GCN20), member 2 (predicted) (Abcf2_predicted), mRNA Length = 2455 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 1828 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 1773
>dbj|AK209085.1| Mus musculus cDNA, clone:Y2G0113O10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030795, based on BLAT search Length = 381 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || |||||||||||||| Sbjct: 221 ttctcacagacccaaatctcctgtgcaacctgctggatgagtctgaagtcatggct 166
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 377 agtcgatggtctcaatgtcaagatgatttgtcggctcatcaagcaacagca 427 |||||||||| ||||| || || || |||||||| |||||||||||||||| Sbjct: 1009766 agtcgatggtttcaatatccaggtggtttgtcggttcatcaagcaacagca 1009716
>emb|Y09439.1|ECUUP E.coli uup gene, partial Length = 2055 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 377 agtcgatggtctcaatgtcaagatgatttgtcggctcatcaagcaacagca 427 |||||||||| ||||| || || || |||||||| |||||||||||||||| Sbjct: 792 agtcgatggtttcaatatccaggtggtttgtcggttcatcaagcaacagca 742
>emb|AJ879065.1| Capsicum chinense partial mRNA for ABC transporter protein Length = 848 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaaca 424 |||||||| |||||||||||||||||||||| Sbjct: 844 tcaagatggtttgtcggctcatcaagcaaca 814
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 377 agtcgatggtctcaatgtcaagatgatttgtcggctcatcaagcaacagca 427 |||||||||| ||||| || || || |||||||| |||||||||||||||| Sbjct: 1010965 agtcgatggtttcaatatccaggtggtttgtcggttcatcaagcaacagca 1010915
>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome Length = 927303 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 394 tcaagatgatttgtcggctcatcaagcaaca 424 ||||||||||| ||||||||||||||||||| Sbjct: 492373 tcaagatgattagtcggctcatcaagcaaca 492403 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 394 tcaagatgatttgtcggctcatcaagcaaca 424 ||||||| ||| ||||||||||||||||||| Sbjct: 491524 tcaagatcattggtcggctcatcaagcaaca 491554
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 377 agtcgatggtctcaatgtcaagatgatttgtcggctcatcaagcaacagca 427 |||||||||| ||||| || || || |||||||| |||||||||||||||| Sbjct: 2269778 agtcgatggtttcaatatccaggtggtttgtcggttcatcaagcaacagca 2269828
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 377 agtcgatggtctcaatgtcaagatgatttgtcggctcatcaagcaacagca 427 |||||||||| ||||| || || || |||||||| |||||||||||||||| Sbjct: 1028636 agtcgatggtttcaatatccaggtggtttgtcggttcatcaagcaacagca 1028586
>gb|AY609877.1| Sus scrofa clone Clu_37429.scr.msk.p1.Contig1, mRNA sequence Length = 1978 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| ||||| || ||||| | || || |||||||||||||| ||| Sbjct: 1826 ttctcacagacccagatttcttgtgcgacctgctgaatgagtctgaagtcatggctgacc 1767 Query: 334 ag 335 || Sbjct: 1766 ag 1765
>dbj|AB041505.1| Populus nigra PnATH mRNA for ABC transporter homolog, complete cds Length = 2272 Score = 52.0 bits (26), Expect = 0.002 Identities = 126/158 (79%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 301 acctgattgatcagcctgaagtcatggctcaccaggaccaaccccccgtcccattccttc 360 |||||||| || |||||||| |||||||| || || |||| ||||| ||| | || ||| Sbjct: 1804 acctgatttatgagcctgaaatcatggctaacaagaaccagacccccatcc-actcattc 1746 Query: 361 agtgcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcggctcatcaagc 420 | |||||| || || ||||| || |||||||| || | ||| ||||| |||||||| ||| Sbjct: 1745 aatgcctcggccagagagtcaatcgtctcaatatccaaatggtttgttggctcatccagc 1686 Query: 421 aacagcatctgtggctgcctaaatgctagccaagcaaa 458 | |||| || ||||||||| | || ||||||||||| Sbjct: 1685 agtagcaagtggggctgcctatacgccagccaagcaaa 1648 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaa 422 ||||||||||| || |||||||||||||| Sbjct: 854 tcaagatgattggttggctcatcaagcaa 826
>ref|XM_796861.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9281-PB, isoform B, transcript variant 3 (LOC581859), mRNA Length = 2034 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 262 gtcaccgcctggttctcacagacccagatctct 294 ||||||||||| |||||||| |||||||||||| Sbjct: 1901 gtcaccgcctgcttctcacatacccagatctct 1869
>ref|XM_775026.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9281-PB, isoform B, transcript variant 1 (LOC581859), mRNA Length = 2124 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 262 gtcaccgcctggttctcacagacccagatctct 294 ||||||||||| |||||||| |||||||||||| Sbjct: 1991 gtcaccgcctgcttctcacatacccagatctct 1959
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 393 gtcaagatgatttgtcggctcatcaagcaacag 425 ||||||||| || |||||||||||||||||||| Sbjct: 3105309 gtcaagatggttggtcggctcatcaagcaacag 3105277
>ref|XM_847469.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F (GCN20), member 2 (LOC488509), mRNA Length = 900 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctg 305 ||||||||||||||||| || ||||||||||| Sbjct: 893 ttctcacagacccagatttcctgggcaacctg 862
>ref|XM_575628.1| PREDICTED: Rattus norvegicus similar to ATP-binding cassette, sub-family F (GCN20), member 2 (LOC500278), mRNA Length = 2445 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| |||| || |||||||| | ||| || |||||||||||||| Sbjct: 1826 ttctcacagacccaactctcctgtgcaacctgctggatgagtctgaagtcatggct 1771
>gb|AF213382.1|AF213382 Mus musculus ATP-binding cassette protein (Abcf2) mRNA, partial cds Length = 982 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| ||||| || |||||||| | ||| || ||||||||||||| Sbjct: 653 ttctcacagacccaaatctcctgtgcaacctgctggatgagtatgaagtcatggct 598
>ref|XM_805793.1| Trypanosoma cruzi strain CL Brener ABC transporter (Tc00.1047053508897.30) partial mRNA Length = 1785 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 387 ctcaatgtcaagatgatttgtcggctc 413 |||||||||||||||||| |||||||| Sbjct: 711 ctcaatgtcaagatgattcgtcggctc 685 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 382 atggtctcaatgtcaagatgatttgtcggctcatcaag 419 |||| ||||||||| | ||| ||||||||||||||||| Sbjct: 1577 atggactcaatgtccaaatggtttgtcggctcatcaag 1540
>emb|BX029477.1|CNS08UWP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA44AB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 679 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||||||||| | || ||||| |||||||||| |||||| ||||| ||| Sbjct: 502 ttctcgcacacccagatctcctccgccacctggttgatcagccggaagtcgtggctgacc 561 Query: 334 aggacca 340 || |||| Sbjct: 562 agcacca 568
>emb|BX009443.1|CNS08FG7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15BC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 982 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||||||||| | || ||||| |||||||||| |||||| ||||| ||| Sbjct: 895 ttctcgcacacccagatctcctccgccacctggttgatcagccggaagtcgtggctgacc 836 Query: 334 aggacca 340 || |||| Sbjct: 835 agcacca 829
>emb|BX251411.1| Tropheryma whipplei TW08/27, complete genome; segment 2/3 Length = 299050 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaaca 424 ||||||| ||| ||||||||||||||||||| Sbjct: 77807 tcaagatcattagtcggctcatcaagcaaca 77777 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaaca 424 ||||||||||| ||||||||||| ||||||| Sbjct: 76958 tcaagatgattagtcggctcatcgagcaaca 76928
>ref|XM_312228.2| Anopheles gambiae str. PEST ENSANGP00000010790 (ENSANGG00000008301), partial mRNA Length = 1707 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||||||||| | || ||||| |||||||||| |||||| ||||| ||| Sbjct: 1610 ttctcgcacacccagatctcctccgccacctggttgatcagccggaagtcgtggctgacc 1551 Query: 334 aggacca 340 || |||| Sbjct: 1550 agcacca 1544
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 385 gtctcaatgtcaagatgatttgtcggctcatcaag 419 |||||||| || |||| |||||||||||||||||| Sbjct: 1550525 gtctcaatatccagatcatttgtcggctcatcaag 1550559
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 385 gtctcaatgtcaagatgatttgtcggctcatcaag 419 |||||||| || |||| |||||||||||||||||| Sbjct: 460261 gtctcaatatccagatcatttgtcggctcatcaag 460227
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 397 agatgatttgtcggctcatcaagcaacagca 427 |||||||| ||||||||||| |||||||||| Sbjct: 3104367 agatgattggtcggctcatccagcaacagca 3104337
>ref|NM_105130.2| Arabidopsis thaliana ATGCN3 AT1G64550 (ATGCN3) mRNA, complete cds Length = 2433 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaacagca 427 ||||||||||| | ||||||||||||||| |||| Sbjct: 2003 tcaagatgattggacggctcatcaagcaatagca 1970
>ref|XM_468495.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1507 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaag 419 |||||||||||||| ||||||||||| Sbjct: 330 tcaagatgatttgttggctcatcaag 305
>ref|XM_468496.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2501 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaag 419 |||||||||||||| ||||||||||| Sbjct: 1232 tcaagatgatttgttggctcatcaag 1207
>gb|BC001661.2| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 2, transcript variant 1, mRNA (cDNA clone MGC:1425 IMAGE:2988125), complete cds Length = 2528 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1849 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1790 Query: 334 ag 335 || Sbjct: 1789 ag 1788
>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence Length = 215539 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 422 acagcatctgtggctgcctaaa 443 |||||||||||||||||||||| Sbjct: 85718 acagcatctgtggctgcctaaa 85739
>ref|XM_855899.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 9 (LOC482806), mRNA Length = 2534 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1939 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1880 Query: 334 ag 335 || Sbjct: 1879 ag 1878
>ref|XM_845127.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 2 (LOC482806), mRNA Length = 2253 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1883 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1824 Query: 334 ag 335 || Sbjct: 1823 ag 1822
>ref|XM_855839.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 8 (LOC482806), mRNA Length = 2001 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1883 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1824 Query: 334 ag 335 || Sbjct: 1823 ag 1822
>ref|XM_855808.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 7 (LOC482806), mRNA Length = 2487 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1892 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1833 Query: 334 ag 335 || Sbjct: 1832 ag 1831
>ref|XM_855775.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 6 (LOC482806), mRNA Length = 2493 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1898 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1839 Query: 334 ag 335 || Sbjct: 1838 ag 1837
>ref|XM_855748.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 5 (LOC482806), mRNA Length = 2487 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1892 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1833 Query: 334 ag 335 || Sbjct: 1832 ag 1831
>ref|XM_855715.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 4 (LOC482806), mRNA Length = 2415 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1820 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1761 Query: 334 ag 335 || Sbjct: 1760 ag 1759
>ref|XM_855686.1| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 3 (LOC482806), mRNA Length = 2388 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1793 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1734 Query: 334 ag 335 || Sbjct: 1733 ag 1732
>ref|XM_539922.2| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family F, member 2 isoform b, transcript variant 1 (LOC482806), mRNA Length = 2478 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||||||||||||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct: 1883 ttctcacagacccagatttcctgtgcaacctgctgaatgagtctgaagtcgtggctgacc 1824 Query: 334 ag 335 || Sbjct: 1823 ag 1822
>gb|BT010544.1| Arabidopsis thaliana At1g64550 gene, complete cds Length = 2148 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaacagca 427 ||||||||||| | ||||||||||||||| |||| Sbjct: 1961 tcaagatgattggacggctcatcaagcaatagca 1928
>emb|BX009444.1|CNS08FG8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 949 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 ||||| || ||||||||||| | || ||||| |||||||||| |||||| ||||| ||| Sbjct: 498 ttctcgcacacccagatctcctccgccacctggttgatcagccggaagtcgtggctgacc 557 Query: 334 ag 335 || Sbjct: 558 ag 559
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 394 tcaagatgatttgtcggctcatcaagcaacagca 427 ||||||||||| ||||| ||||| |||||||||| Sbjct: 2368609 tcaagatgattggtcggttcatcgagcaacagca 2368642
>gb|BT007451.1| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 2 mRNA, complete cds Length = 1872 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1763 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1704 Query: 334 ag 335 || Sbjct: 1703 ag 1702
>gb|AY927589.1| Homo sapiens mRNA sequence Length = 1271 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 798 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 857 Query: 334 ag 335 || Sbjct: 858 ag 859
>emb|AL050291.1|HSM800519 Homo sapiens mRNA; cDNA DKFZp586K1823 (from clone DKFZp586K1823) Length = 2197 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1809 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1750 Query: 334 ag 335 || Sbjct: 1749 ag 1748
>emb|CR611017.1| full-length cDNA clone CS0DJ002YA18 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1554 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 945 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 886 Query: 334 ag 335 || Sbjct: 885 ag 884
>ref|XM_684825.1| PREDICTED: Danio rerio similar to LOC495035 protein (LOC561419), mRNA Length = 693 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 379 tcgatggtctcaatgtcaagatgatttgtcggctcatc 416 ||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 623 tcgatggtctccatgtccagatgattggtcggttcatc 586
>gb|DQ086211.1| Ictalurus punctatus ATP-binding cassette sub-family F mRNA, partial cds Length = 375 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Minus Query: 364 gcctcagcaagtgagtcgatggtctcaatgtcaagatgatttgtcggctc 413 ||||| ||||||| |||||||||||| ||||| || ||||| || ||||| Sbjct: 230 gcctcggcaagtgcgtcgatggtctcgatgtccaggtgattggtaggctc 181
>ref|NM_005692.3| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 2 (ABCF2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA Length = 2262 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1874 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1815 Query: 334 ag 335 || Sbjct: 1814 ag 1813
>ref|NM_007189.1| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 2 (ABCF2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA Length = 3552 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1874 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1815 Query: 334 ag 335 || Sbjct: 1814 ag 1813
>gb|U66678.1|U66678 Homo sapiens clone EST133090 mRNA sequence Length = 1746 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 515 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 456 Query: 334 ag 335 || Sbjct: 455 ag 454
>gb|AF261092.1|AF261092 Homo sapiens iron inhibited ABC transporter 1 mRNA, complete cds Length = 2507 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1855 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1796 Query: 334 ag 335 || Sbjct: 1795 ag 1794
>gb|AF261091.1|AF261091 Homo sapiens iron inhibited ABC transporter 2 mRNA, complete cds Length = 3552 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1874 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1815 Query: 334 ag 335 || Sbjct: 1814 ag 1813
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 382 atggtctcaatgtcaagatgatttgtcggctcatcaagcaacagca 427 ||||| ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct: 857535 atggtatcaatatcaaggtgattggtcggctcatccagcaaaagca 857490
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 agatgatttgtcggctcatcaagcaa 422 |||||||| ||||||||||||||||| Sbjct: 1663995 agatgattggtcggctcatcaagcaa 1663970
>emb|BX294392.3| Zebrafish DNA sequence from clone CH211-262O24 in linkage group 23, complete sequence Length = 141252 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 attccttcagtgcctcagcaag 374 |||||||||||||||||||||| Sbjct: 97205 attccttcagtgcctcagcaag 97184
>gb|AY888709.1| Synthetic construct Homo sapiens clone FLH026389.01X ATP-binding cassette sub-family F (GCN20) mRNA, complete cds Length = 1872 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1763 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1704 Query: 334 ag 335 || Sbjct: 1703 ag 1702
>dbj|AK100809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121N24, full insert sequence Length = 2499 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaag 419 |||||||||||||| ||||||||||| Sbjct: 1230 tcaagatgatttgttggctcatcaag 1205
>dbj|AK099841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108I04, full insert sequence Length = 1507 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaag 419 |||||||||||||| ||||||||||| Sbjct: 330 tcaagatgatttgttggctcatcaag 305
>gb|BT002015.1| Arabidopsis thaliana ABC transporter protein, putative (At1g64550) mRNA, complete cds Length = 2432 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaacagca 427 ||||||||||| | ||||||||||||||| |||| Sbjct: 2003 tcaagatgattggacggctcatcaagcaatagca 1970
>gb|AY107116.1| Zea mays PCO063423 mRNA sequence Length = 1640 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaag 419 |||||||| ||||||||||||||||| Sbjct: 460 tcaagatggtttgtcggctcatcaag 435
>gb|AF091073.1|AF091073 Homo sapiens clone 203 ABC transporter mRNA, complete cds Length = 926 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 256 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 197 Query: 334 ag 335 || Sbjct: 196 ag 195
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 400 tgatttgtcggctcatcaagca 421 |||||||||||||||||||||| Sbjct: 888992 tgatttgtcggctcatcaagca 888971
>emb|AL929188.6| Zebrafish DNA sequence from clone CH211-273O6 in linkage group 23, complete sequence Length = 150865 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 attccttcagtgcctcagcaag 374 |||||||||||||||||||||| Sbjct: 126611 attccttcagtgcctcagcaag 126590
>emb|AJ005016.1|HSAJ5016 Homo sapiens mRNA for putative ABC transporter, partial Length = 2214 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggctcacc 333 |||||||||||||| || || || |||||||| | || || |||||||||||||| ||| Sbjct: 1544 ttctcacagacccaaatttcctgtgcaacctgctgaatgagtctgaagtcatggctgacc 1485 Query: 334 ag 335 || Sbjct: 1484 ag 1483
>ref|NM_125882.2| Arabidopsis thaliana ATGCN5 AT5G64840 (ATGCN5) mRNA, complete cds Length = 2429 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaag 419 ||||||||||||||||||||| Sbjct: 984 atgatttgtcggctcatcaag 964
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tttgtcggctcatcaagcaacagca 427 ||||||||||||||||||| ||||| Sbjct: 1618539 tttgtcggctcatcaagcatcagca 1618515
>ref|NM_184650.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2133 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 393 gtcaagatgatttgtcggctcatcaagca 421 |||||||||||| ||||| |||||||||| Sbjct: 1002 gtcaagatgattagtcggttcatcaagca 974
>ref|NM_189247.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 261 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaa 422 |||||||| ||||| |||||||||||||| Sbjct: 251 tcaagatggtttgttggctcatcaagcaa 223
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tttgtcggctcatcaagcaacagca 427 ||||||||||||||||||| ||||| Sbjct: 1619383 tttgtcggctcatcaagcatcagca 1619359
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tcaatgtcaagatgatttgtcggctcatc 416 |||||||| ||||| |||||||||||||| Sbjct: 223432 tcaatgtcgagatggtttgtcggctcatc 223404
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tcaatgtcaagatgatttgtcggctcatc 416 |||||||| ||||| |||||||||||||| Sbjct: 217885 tcaatgtcgagatggtttgtcggctcatc 217857
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tcaatgtcaagatgatttgtcggctcatc 416 |||||||| ||||| |||||||||||||| Sbjct: 217886 tcaatgtcgagatggtttgtcggctcatc 217858
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 393 gtcaagatgatttgtcggctcatcaagca 421 |||||||||||| ||||| |||||||||| Sbjct: 18500268 gtcaagatgattagtcggttcatcaagca 18500296
>ref|XM_752296.1| Ustilago maydis 521 hypothetical protein (UM01242.1) partial mRNA Length = 2118 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 cgtcccattccttcagtgcctcagc 371 |||||||||||||||||||| |||| Sbjct: 421 cgtcccattccttcagtgccgcagc 397
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tcaatgtcaagatgatttgtcggctcatc 416 |||||||| ||||| |||||||||||||| Sbjct: 220799 tcaatgtcgagatggtttgtcggctcatc 220771
>gb|BT000510.1| Arabidopsis thaliana ABC transporter protein 1-like protein (At5g64840/MXK3_6) mRNA, complete cds Length = 2079 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaag 419 ||||||||||||||||||||| Sbjct: 867 atgatttgtcggctcatcaag 847
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 atgatttgtcggctcatcaag 419 ||||||||||||||||||||| Sbjct: 1443418 atgatttgtcggctcatcaag 1443438
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Minus Query: 377 agtcgatggtctcaatgtcaagatgatttgtcggctcatcaagca 421 |||||||||| ||||| || ||||| || ||||||||||| |||| Sbjct: 1689416 agtcgatggtttcaatatccagatggttggtcggctcatccagca 1689372
>gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic sequence, complete sequence Length = 158170 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 393 gtcaagatgatttgtcggctcatcaagca 421 |||||||||||| ||||| |||||||||| Sbjct: 137409 gtcaagatgattagtcggttcatcaagca 137381
>gb|AY056435.1| Arabidopsis thaliana AT5g64840/MXK3_6 mRNA, complete cds Length = 2322 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 atgatttgtcggctcatcaag 419 ||||||||||||||||||||| Sbjct: 981 atgatttgtcggctcatcaag 961
>gb|AC154792.2| Mus musculus BAC clone RP23-85E10 from chromosome 13, complete sequence Length = 201302 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 tttcttcaaatgttgcttgaa 236 ||||||||||||||||||||| Sbjct: 154856 tttcttcaaatgttgcttgaa 154836
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 393 gtcaagatgatttgtcggctcatcaagca 421 |||||||||||| ||||| |||||||||| Sbjct: 18494309 gtcaagatgattagtcggttcatcaagca 18494337
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 395 caagatgatttgtcggctcatcaagcaacagca 427 |||||||||| | ||||||||||||||| |||| Sbjct: 41258 caagatgattggacggctcatcaagcaatagca 41226
>dbj|AB019236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK3 Length = 81494 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 atgatttgtcggctcatcaag 419 ||||||||||||||||||||| Sbjct: 16069 atgatttgtcggctcatcaag 16089
>dbj|AK121200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087I02, full insert sequence Length = 3482 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaa 422 |||||||| ||||| |||||||||||||| Sbjct: 652 tcaagatggtttgttggctcatcaagcaa 624
>dbj|AK108533.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-C05, full insert sequence Length = 1065 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaagcaa 422 |||||||| ||||| |||||||||||||| Sbjct: 588 tcaagatggtttgttggctcatcaagcaa 560
>dbj|AK102700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103K23, full insert sequence Length = 2477 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 393 gtcaagatgatttgtcggctcatcaagca 421 |||||||||||| ||||| |||||||||| Sbjct: 1074 gtcaagatgattagtcggttcatcaagca 1046
>dbj|AK060827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B11, full insert sequence Length = 1712 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 393 gtcaagatgatttgtcggctcatcaagca 421 |||||||||||| ||||| |||||||||| Sbjct: 317 gtcaagatgattagtcggttcatcaagca 289
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaa 418 |||||||| |||||||||||||||| Sbjct: 5354420 tcaagatggtttgtcggctcatcaa 5354396 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tcaatgtcaagatgatttgtcggctcatc 416 ||||| |||||||| |||||||||||||| Sbjct: 214839 tcaatatcaagatggtttgtcggctcatc 214811
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tcaatgtcaagatgatttgtcggctcatc 416 |||||||| ||||| |||||||||||||| Sbjct: 217885 tcaatgtcgagatggtttgtcggctcatc 217857
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 394 tcaagatgatttgtcggctcatcaa 418 |||||||| |||||||||||||||| Sbjct: 5148391 tcaagatggtttgtcggctcatcaa 5148367 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 388 tcaatgtcaagatgatttgtcggctcatc 416 |||||||| ||||||||||| |||||||| Sbjct: 247748 tcaatgtcgagatgatttgttggctcatc 247720
>emb|CT033775.6| Mouse DNA sequence from clone RP24-145H15 on chromosome 13, complete sequence Length = 168176 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 tttcttcaaatgttgcttgaa 236 ||||||||||||||||||||| Sbjct: 118918 tttcttcaaatgttgcttgaa 118938
>emb|AL606509.6| Mouse DNA sequence from clone RP23-415B9 on chromosome 11, complete sequence Length = 197852 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tctggttataaaatagcatag 57 ||||||||||||||||||||| Sbjct: 96797 tctggttataaaatagcatag 96777
>emb|AL133368.6|CNS01DUT Human chromosome 14 DNA sequence BAC R-436M15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163272 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 aagatacgaaaattaaataag 31 ||||||||||||||||||||| Sbjct: 97960 aagatacgaaaattaaataag 97940
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctg 305 |||||||||||||| ||||| || |||||||| Sbjct: 127582 ttctcacagacccaaatctcctgtgcaacctg 127551
>gb|AC133459.9| Mus musculus chromosome 12, clone RP23-383O15, complete sequence Length = 227171 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ttagagaccagctcttttct 220 |||||||||||||||||||| Sbjct: 221766 ttagagaccagctcttttct 221747
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 cggctcatcaagcaacagca 427 |||||||||||||||||||| Sbjct: 1845112 cggctcatcaagcaacagca 1845131
>gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, complete sequence Length = 107705 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 aaaagacatgaaattagaga 207 |||||||||||||||||||| Sbjct: 35357 aaaagacatgaaattagaga 35338
>gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186580 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tctggttataaaatagcata 56 |||||||||||||||||||| Sbjct: 103960 tctggttataaaatagcata 103979
>ref|XR_003886.1| PREDICTED: Mus musculus similar to ATP-binding cassette, sub-family F (GCN20), member 2 (LOC672527), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| |||| || ||||| || | ||| || |||||||||||||| Sbjct: 1571 ttctcacagacccaattctcctgtgcaacttgctggatgagtctgaagtcatggct 1516
>ref|XR_001937.1| PREDICTED: Mus musculus similar to ATP-binding cassette, sub-family F (GCN20), member 2 (LOC666883), mRNA Length = 1679 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| |||| || ||||| || | ||| || |||||||||||||| Sbjct: 1573 ttctcacagacccaattctcctgtgcaacttgctggatgagtctgaagtcatggct 1518
>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence Length = 232320 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ttagagaccagctcttttct 220 |||||||||||||||||||| Sbjct: 91499 ttagagaccagctcttttct 91480
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 cggctcatcaagcaacagca 427 |||||||||||||||||||| Sbjct: 164024 cggctcatcaagcaacagca 164005
>emb|AL359180.17| Human DNA sequence from clone RP11-320G21 on chromosome 13, complete sequence Length = 159229 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 gagaaggaaaagacatgaaa 200 |||||||||||||||||||| Sbjct: 131087 gagaaggaaaagacatgaaa 131106
>emb|Z99107.2|BSUB0004 Bacillus subtilis complete genome (section 4 of 21): from 611631 to 813719 Length = 202089 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 388 tcaatgtcaagatgatttgtcggctcatcaag 419 ||||| || ||||| ||||||||||||||||| Sbjct: 33787 tcaatatccagatggtttgtcggctcatcaag 33818
>emb|Z33055.1|MC068 M.capricolum DNA for CONTIG MC068 Length = 1061 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 aatgtcaaagatacgaaaattaaataag 31 ||||||||||||| ||||||| |||||| Sbjct: 333 aatgtcaaagatatgaaaatttaataag 306
>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 1/4 Length = 347558 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 aatgtcaaagatacgaaaattaaataag 31 ||||||||||||| ||||||| |||||| Sbjct: 151609 aatgtcaaagatatgaaaatttaataag 151636
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 2/17 Length = 349287 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 394 tcaagatgatttgtcggctcatcaagcaacag 425 |||||||| || ||||| |||||||||||||| Sbjct: 101259 tcaagatggttagtcggttcatcaagcaacag 101290
>emb|AL626804.10| Zebrafish DNA sequence from clone RP71-1H10 in linkage group 1 Contains a novel gene similar to human CTNNA2 (catenin (cadherin-associated protein), alpha 2) and three CpG islands, complete sequence Length = 149717 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 agcaacagcatctgtggctg 437 |||||||||||||||||||| Sbjct: 71333 agcaacagcatctgtggctg 71352
>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18, complete sequence Length = 149493 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cttcaaatgttgcttgaaat 238 |||||||||||||||||||| Sbjct: 58652 cttcaaatgttgcttgaaat 58633
>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence Length = 107160 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aaagatacgaaaattaaata 29 |||||||||||||||||||| Sbjct: 41030 aaagatacgaaaattaaata 41011
>gb|AC113398.3| Homo sapiens chromosome 5 clone RP11-436H11, complete sequence Length = 172613 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ttagagaccagctcttttct 220 |||||||||||||||||||| Sbjct: 15511 ttagagaccagctcttttct 15530
>gb|AC112196.3| Homo sapiens chromosome 5 clone RP11-43D2, complete sequence Length = 180001 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ttagagaccagctcttttct 220 |||||||||||||||||||| Sbjct: 113341 ttagagaccagctcttttct 113360
>gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 222524 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 ttctcacagacccagatctcttgggcaacctg 305 |||||||||||||| ||||| || |||||||| Sbjct: 187453 ttctcacagacccaaatctcctgtgcaacctg 187484
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 aatgtcaaagatacgaaaattaaataag 31 ||||||||||||| ||||||| |||||| Sbjct: 154687 aatgtcaaagatatgaaaatttaataag 154714
>gb|AC122353.5| Mus musculus BAC clone RP23-391E17 from chromosome 16, complete sequence Length = 200401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 aaatgctagccaagcaaaaa 460 |||||||||||||||||||| Sbjct: 26064 aaatgctagccaagcaaaaa 26083
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 caagatgatttgtcggctcatcaagcaa 422 ||||||| ||||| |||||||||||||| Sbjct: 16521689 caagatggtttgttggctcatcaagcaa 16521716
>gb|AC007186.9|AC007186 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR03D06, complete sequence Length = 176306 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agatacgaaaattaaataag 31 |||||||||||||||||||| Sbjct: 92868 agatacgaaaattaaataag 92887
>gb|AY594332.1| Aspergillus niger glutamine:fructose-6-phosphate amidotransferase (gfaA) gene, complete cds Length = 9396 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ccgagaaggaaaagacatga 198 |||||||||||||||||||| Sbjct: 7861 ccgagaaggaaaagacatga 7842
>gb|AC154220.1| Mus musculus BAC clone RP24-364C6 from chromosome 13, complete sequence Length = 175727 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 274 ttctcacagacccagatctcttgggcaacctgattgatcagcctgaagtcatggct 329 |||||||||||||| |||| || ||||| || | ||| || |||||||||||||| Sbjct: 153692 ttctcacagacccaattctcctgtgcaacttgctggatgagtctgaagtcatggct 153747
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1460_H08 Length = 113514 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 caagatgatttgtcggctcatcaagcaa 422 ||||||| ||||| |||||||||||||| Sbjct: 42359 caagatggtttgttggctcatcaagcaa 42386
>emb|BX293537.10| Mouse DNA sequence from clone RP23-240M8 on chromosome X, complete sequence Length = 163726 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 agccgagaaggaaaagacatgaaa 200 ||||||||||||||||| |||||| Sbjct: 36514 agccgagaaggaaaagaaatgaaa 36537
>gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39 of 83 of the complete sequence Length = 289460 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agatacgaaaattaaataag 31 |||||||||||||||||||| Sbjct: 155756 agatacgaaaattaaataag 155775
>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence Length = 1332022 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tgtcggctcatcaagcaaca 424 |||||||||||||||||||| Sbjct: 1094276 tgtcggctcatcaagcaaca 1094295
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 taaatgatggaaactttctg 135 |||||||||||||||||||| Sbjct: 4013381 taaatgatggaaactttctg 4013362
>gb|AC140376.3| Mus musculus BAC clone RP24-78P21 from 12, complete sequence Length = 246636 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ttagagaccagctcttttct 220 |||||||||||||||||||| Sbjct: 97498 ttagagaccagctcttttct 97517
>dbj|D88802.1| Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds Length = 36308 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 388 tcaatgtcaagatgatttgtcggctcatcaag 419 ||||| || ||||| ||||||||||||||||| Sbjct: 31888 tcaatatccagatggtttgtcggctcatcaag 31919 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,799,744 Number of Sequences: 3902068 Number of extensions: 4799744 Number of successful extensions: 87569 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86702 Number of HSP's gapped (non-prelim): 867 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)