>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 877

 Score =  154 bits (388), Expect = 6e-38
 Identities = 84/106 (79%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
 Frame = -2

Query: 380  KSDWSMVRFSCEMGSD-GAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTVHV 204
            +SDWSMVRF+ ++ ++ GAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTVHV
Sbjct: 772  RSDWSMVRFNYKIPNNKGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTVHV 831

Query: 203  NSAEVEASLSAGTRYQNXXXXXXXXXXXXLSLVVGEEFELKVAMSY 66
            NSAEVEAS SAGTRYQN            LSLVVGEEFELKVAMSY
Sbjct: 832  NSAEVEASSSAGTRYQNAGGLGGVAHIGGLSLVVGEEFELKVAMSY 877

>DPOE_DEBHA (Q6BNG2) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
            (DNA polymerase II subunit A)
          Length = 2226

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -2

Query: 377  SDWSMVRFSCEMGSDGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTVHVNS 198
            SDW ++ +  +    G IKV   V+ ++   S T  + K V    ++  +PKK    + +
Sbjct: 1332 SDWEILEYKADPSKPGDIKV--YVLASNKVHSFTFHVPKKVYASFKTELSPKKA---IRN 1386

Query: 197  AEVEAS 180
             E+E S
Sbjct: 1387 CEIEKS 1392

>THR_DROME (P42286) Protein three rows|
          Length = 1379

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 377 SDWSMVRFSCEMGSDGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRS 237
           SD+ +V  + +M  D +I  K   VH+   Q R+L     + +GH S
Sbjct: 611 SDYHLVLLARQMRKDDSISKKCIEVHDKLRQQRSLSRMDNLCLGHAS 657

>LHR2A_HUMAN (O00534) Loss of heterozygosity 11 chromosomal region 2 gene A|
           protein (Breast cancer suppressor candidate 1) (BCSC-1)
          Length = 786

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 245 HRSPAAPKKLTVHVNSAEVEASLSAGTRYQN 153
           HR P   K ++V VN  E  A +SA   Y+N
Sbjct: 11  HREPVPLKSISVSVNIYEFVAGVSATLNYEN 41

>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2|
           (RalGDS-like factor) (RAS-associated protein RAB2L)
          Length = 778

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 383 GKSDWSMVRFSCEMGSDGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPA 231
           G SD  ++R   E+G DG++     V     A S   VIS+V+   +R  A
Sbjct: 646 GSSDCRIIRVQMELGEDGSVYKSILVTSQDKAPS---VISRVLKKNNRDSA 693

>VCIP1_RAT (Q8CF97) Deubiquitinating protein VCIP135 (EC 3.4.22.-)|
            (Valosin-containing protein p97/p47 complex-interacting
            protein p135) (Valosin-containing protein p97/p47
            complex-interacting protein 1)
          Length = 1221

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -2

Query: 347  EMGSDGAIKVKSEVVHNSYA-QSRTLVISKVVLMGHRSPAAPKKLTVHVNSAEVEASLSA 171
            ++GS G +K KSE +HN  A Q +   +       H  P A + L V  ++   + S S+
Sbjct: 1004 KLGSGGVVKKKSEQLHNVTAFQGKGHSLGTASSNPHMDPRARETLAVRKHNTGTDFSNSS 1063


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,967,268
Number of Sequences: 219361
Number of extensions: 605590
Number of successful extensions: 1817
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)