ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoc... 31 1.8
2DPP10_RAT (Q6Q629) Inactive dipeptidyl peptidase 10 (Dipeptidyl ... 31 1.8

>GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91)|
           (Exocellobiohydrolase 1) (1,4-beta-cellobiohydrolase)
          Length = 516

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = -1

Query: 371 SSTPVHTPYISASQKPKTQELSSSTKLQHPS--YALHARSDDGMSMSESFACMHAYACAR 198
           S TP   P  SAS    T + SS++   +PS   A H     G+  S    C   Y CA+
Sbjct: 448 SGTPPSNPSSSASPTSSTAKPSSTSTASNPSGTGAAHWAQCGGIGFSGPTTCPEPYTCAK 507



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>DPP10_RAT (Q6Q629) Inactive dipeptidyl peptidase 10 (Dipeptidyl peptidase X)|
           (Kv4 potassium channel auxiliary subunit)
          Length = 796

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 57  DHHFFHCNTVINTATNQETDAAA-SLEYLGRDMEREGVYRSSNV 185
           D  FF C TV+   ++ +  A+A S  YLG   + E  Y++S+V
Sbjct: 664 DEKFFKCGTVVAPISDMKLYASAFSERYLGMPSKEESTYQASSV 707


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,620,937
Number of Sequences: 219361
Number of extensions: 999729
Number of successful extensions: 2652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2652
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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