ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K125_TOBAC (O23826) 125 kDa kinesin-related protein 91 8e-19
2K125_ARATH (P82266) Probable 125 kDa kinesin-related protein 85 8e-17
3ZFP11_MOUSE (P10751) Zinc finger protein 11 (Zfp-11) (Krox-6.1A ... 29 5.2
4ZNF91_HUMAN (Q05481) Zinc finger protein 91 (Zinc finger protein... 29 5.2
5PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5) 29 5.2
6EAA3_CAEEL (Q21353) Putative sodium-dependent excitatory amino a... 28 6.7
7MURA_PSYAR (Q4FQF6) UDP-N-acetylglucosamine 1-carboxyvinyltransf... 28 8.8
8ZN184_HUMAN (Q99676) Zinc finger protein 184 28 8.8
9VEGFA_RAT (P16612) Vascular endothelial growth factor A precurso... 28 8.8
10ZNF85_HUMAN (Q03923) Zinc finger protein 85 (Zinc finger protein... 28 8.8

>K125_TOBAC (O23826) 125 kDa kinesin-related protein|
          Length = 1006

 Score = 91.3 bits (225), Expect = 8e-19
 Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
 Frame = -1

Query: 410  YRDYEPTGETPVRCEPEVSSKGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPR 237
            Y DYEPTG TP+R EP+V SK TIESLRAMP+E L++EFREN+ +ES   KE KPSLIPR
Sbjct: 939  YMDYEPTGATPIRSEPDVPSKVTIESLRAMPMEVLLEEFRENNSFESFQVKEVKPSLIPR 998

Query: 236  SPLATLN 216
            SP + +N
Sbjct: 999  SPFSQIN 1005



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>K125_ARATH (P82266) Probable 125 kDa kinesin-related protein|
          Length = 1056

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
 Frame = -1

Query: 410  YRDYEPTGETPVRCEPEVSSKGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPR 237
            Y +YEPTG TP + EPE+ +K TIESLRAMPIE+L++EFREN+ YES  +KE KP  + R
Sbjct: 943  YMEYEPTGATPTKNEPEIPTKATIESLRAMPIETLVEEFRENNSYESFATKETKPQQLTR 1002

Query: 236  SPLATL 219
            SPL+ L
Sbjct: 1003 SPLSQL 1008



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>ZFP11_MOUSE (P10751) Zinc finger protein 11 (Zfp-11) (Krox-6.1A protein)|
          Length = 647

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +3

Query: 180 LHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARD 359
           +HTE K Y C   EC K   R             +   ++IH+G   H+     RAF++ 
Sbjct: 162 IHTEAKPYRCQ--ECGKAFKRSHT----------LSQHQVIHKGEKPHKCDECGRAFSKH 209

Query: 360 FRLTPHR 380
             LT H+
Sbjct: 210 SSLTQHQ 216



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>ZNF91_HUMAN (Q05481) Zinc finger protein 91 (Zinc finger protein HTF10) (HPF7)|
          Length = 1191

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +3

Query: 168 NQITLHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRA 347
           N    HTE+K Y C   EC K      +RL  L +       ++IH G   ++ +   +A
Sbjct: 675 NHKITHTEEKPYKCK--ECDK----TFKRLSTLTKH------KIIHAGEKLYKCEECGKA 722

Query: 348 FARDFRLTPHR 380
           F R   LT H+
Sbjct: 723 FNRSSNLTIHK 733



 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +3

Query: 168 NQITLHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRA 347
           N    HTE+K Y C   EC K      +RL  L +       ++IH G   ++ +   +A
Sbjct: 367 NHKITHTEEKPYKCK--ECDK----TFKRLSTLTKH------KIIHAGEKLYKCEECGKA 414

Query: 348 FARDFRLTPHR 380
           F R   LT H+
Sbjct: 415 FNRSSNLTIHK 425



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>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)|
          Length = 1101

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -1

Query: 371 CEPEVSSKGTIESLRAMPIESLMDEFRENHPYESSKEPKPSLIPRSP 231
           C+ +   +     + A P +SL+++  +    ++ K PKPS IP+ P
Sbjct: 463 CDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPP 509



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>EAA3_CAEEL (Q21353) Putative sodium-dependent excitatory amino acid|
           transporter glt-3
          Length = 532

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 11/37 (29%)
 Frame = +3

Query: 234 RARDERRLG-----------FLARFIGMVLTELIHQG 311
           RARD RR+G           FLA F G++L   IH G
Sbjct: 70  RARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG 106



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>MURA_PSYAR (Q4FQF6) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC|
           2.5.1.7) (Enoylpyruvate transferase)
           (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
          Length = 422

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 297 LIHQGLDWHRSQRLDRAFARDFRLTPHRSFTSRLIVPVAAM 419
           +I  G DW R+Q   R  A D R  PH  F + +   V A+
Sbjct: 275 IITSGDDWIRAQMKGRPKAVDIRTQPHPGFPTDMQAQVMAI 315



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>ZN184_HUMAN (Q99676) Zinc finger protein 184|
          Length = 751

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = +3

Query: 183 HTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARDF 362
           HTE+K Y C   +C K  ++             +   + IH G   ++    D+AF+R  
Sbjct: 636 HTEEKPYQCN--KCEKTFSQSSH----------LTQHQRIHTGEKPYKCNECDKAFSRST 683

Query: 363 RLTPHRS 383
            LT H++
Sbjct: 684 HLTEHQN 690



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>VEGFA_RAT (P16612) Vascular endothelial growth factor A precursor (VEGF-A)|
           (Vascular permeability factor) (VPF)
          Length = 214

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 419 HSSYRDYEPTGETPVRCEPEVSSKGTIESLRAMPIESLMDEFRENHPYESSKEPKPSLIP 240
           H+ +    PT E   +    V      +     PIE+L+D F+E +P E     KPS +P
Sbjct: 20  HAKWSQAAPTTEGEQKAHEVVKFMDVYQRSYCRPIETLVDIFQE-YPDEIEYIFKPSCVP 78



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>ZNF85_HUMAN (Q03923) Zinc finger protein 85 (Zinc finger protein HPF4) (HTF1)|
          Length = 595

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +3

Query: 180 LHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARD 359
           +HT +K Y C   EC K             RF  +   ++IH G   ++ +   +AF R 
Sbjct: 251 IHTGEKPYKC--EECGK----------AFNRFSTLTTHKIIHTGEKPYKCKECGKAFNRS 298

Query: 360 FRLTPHR 380
             LT HR
Sbjct: 299 STLTTHR 305


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,076,404
Number of Sequences: 219361
Number of extensions: 1110583
Number of successful extensions: 3464
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3456
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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