Clone Name | rbastl19b07 |
---|---|
Clone Library Name | barley_pub |
>K125_TOBAC (O23826) 125 kDa kinesin-related protein| Length = 1006 Score = 91.3 bits (225), Expect = 8e-19 Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 2/67 (2%) Frame = -1 Query: 410 YRDYEPTGETPVRCEPEVSSKGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPR 237 Y DYEPTG TP+R EP+V SK TIESLRAMP+E L++EFREN+ +ES KE KPSLIPR Sbjct: 939 YMDYEPTGATPIRSEPDVPSKVTIESLRAMPMEVLLEEFRENNSFESFQVKEVKPSLIPR 998 Query: 236 SPLATLN 216 SP + +N Sbjct: 999 SPFSQIN 1005
>K125_ARATH (P82266) Probable 125 kDa kinesin-related protein| Length = 1056 Score = 84.7 bits (208), Expect = 8e-17 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 2/66 (3%) Frame = -1 Query: 410 YRDYEPTGETPVRCEPEVSSKGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPR 237 Y +YEPTG TP + EPE+ +K TIESLRAMPIE+L++EFREN+ YES +KE KP + R Sbjct: 943 YMEYEPTGATPTKNEPEIPTKATIESLRAMPIETLVEEFRENNSYESFATKETKPQQLTR 1002 Query: 236 SPLATL 219 SPL+ L Sbjct: 1003 SPLSQL 1008
>ZFP11_MOUSE (P10751) Zinc finger protein 11 (Zfp-11) (Krox-6.1A protein)| Length = 647 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +3 Query: 180 LHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARD 359 +HTE K Y C EC K R + ++IH+G H+ RAF++ Sbjct: 162 IHTEAKPYRCQ--ECGKAFKRSHT----------LSQHQVIHKGEKPHKCDECGRAFSKH 209 Query: 360 FRLTPHR 380 LT H+ Sbjct: 210 SSLTQHQ 216
>ZNF91_HUMAN (Q05481) Zinc finger protein 91 (Zinc finger protein HTF10) (HPF7)| Length = 1191 Score = 28.9 bits (63), Expect = 5.2 Identities = 22/71 (30%), Positives = 32/71 (45%) Frame = +3 Query: 168 NQITLHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRA 347 N HTE+K Y C EC K +RL L + ++IH G ++ + +A Sbjct: 675 NHKITHTEEKPYKCK--ECDK----TFKRLSTLTKH------KIIHAGEKLYKCEECGKA 722 Query: 348 FARDFRLTPHR 380 F R LT H+ Sbjct: 723 FNRSSNLTIHK 733 Score = 28.9 bits (63), Expect = 5.2 Identities = 22/71 (30%), Positives = 32/71 (45%) Frame = +3 Query: 168 NQITLHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRA 347 N HTE+K Y C EC K +RL L + ++IH G ++ + +A Sbjct: 367 NHKITHTEEKPYKCK--ECDK----TFKRLSTLTKH------KIIHAGEKLYKCEECGKA 414 Query: 348 FARDFRLTPHR 380 F R LT H+ Sbjct: 415 FNRSSNLTIHK 425
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/47 (27%), Positives = 25/47 (53%) Frame = -1 Query: 371 CEPEVSSKGTIESLRAMPIESLMDEFRENHPYESSKEPKPSLIPRSP 231 C+ + + + A P +SL+++ + ++ K PKPS IP+ P Sbjct: 463 CDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPP 509
>EAA3_CAEEL (Q21353) Putative sodium-dependent excitatory amino acid| transporter glt-3 Length = 532 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 11/37 (29%) Frame = +3 Query: 234 RARDERRLG-----------FLARFIGMVLTELIHQG 311 RARD RR+G FLA F G++L IH G Sbjct: 70 RARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG 106
>MURA_PSYAR (Q4FQF6) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 422 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +3 Query: 297 LIHQGLDWHRSQRLDRAFARDFRLTPHRSFTSRLIVPVAAM 419 +I G DW R+Q R A D R PH F + + V A+ Sbjct: 275 IITSGDDWIRAQMKGRPKAVDIRTQPHPGFPTDMQAQVMAI 315
>ZN184_HUMAN (Q99676) Zinc finger protein 184| Length = 751 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = +3 Query: 183 HTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARDF 362 HTE+K Y C +C K ++ + + IH G ++ D+AF+R Sbjct: 636 HTEEKPYQCN--KCEKTFSQSSH----------LTQHQRIHTGEKPYKCNECDKAFSRST 683 Query: 363 RLTPHRS 383 LT H++ Sbjct: 684 HLTEHQN 690
>VEGFA_RAT (P16612) Vascular endothelial growth factor A precursor (VEGF-A)| (Vascular permeability factor) (VPF) Length = 214 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = -1 Query: 419 HSSYRDYEPTGETPVRCEPEVSSKGTIESLRAMPIESLMDEFRENHPYESSKEPKPSLIP 240 H+ + PT E + V + PIE+L+D F+E +P E KPS +P Sbjct: 20 HAKWSQAAPTTEGEQKAHEVVKFMDVYQRSYCRPIETLVDIFQE-YPDEIEYIFKPSCVP 78
>ZNF85_HUMAN (Q03923) Zinc finger protein 85 (Zinc finger protein HPF4) (HTF1)| Length = 595 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +3 Query: 180 LHTEKKYYHCLSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARD 359 +HT +K Y C EC K RF + ++IH G ++ + +AF R Sbjct: 251 IHTGEKPYKC--EECGK----------AFNRFSTLTTHKIIHTGEKPYKCKECGKAFNRS 298 Query: 360 FRLTPHR 380 LT HR Sbjct: 299 STLTTHR 305 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,076,404 Number of Sequences: 219361 Number of extensions: 1110583 Number of successful extensions: 3464 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3456 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)