ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl19b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump ATPase (Ha1) mRNA, complete cds Length = 3446 Score = 835 bits (421), Expect = 0.0 Identities = 424/425 (99%) Strand = Plus / Minus Query: 1 agcaagcaagtggcagaaaatttgcagtgattatttctcgtcttgcttccgcaagatcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3367 agcaagcaagtggcagaaaatttgcagtgattatttctcgtcttgcttccgcaagatcac 3308 Query: 61 cgactagttaggggaaagggtaaaacgattacaccacgccgtgctccaaacacggtataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3307 cgactagttaggggaaagggtaaaacgattacaccacgccgtgctccaaacacggtataa 3248 Query: 121 ctccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3247 ctccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggta 3188 Query: 181 gcactttacaactaggggctggtcaaatcagccatgtttctttcattcatgcaccggaaa 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3187 gcactttacaactaggggctggtcagatcagccatgtttctttcattcatgcaccggaaa 3128 Query: 241 aatcttaaagcggagctccattccaatctcgctccaatacggatgtcatgttgtttggtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3127 aatcttaaagcggagctccattccaatctcgctccaatacggatgtcatgttgtttggtc 3068 Query: 301 caatgcccaaattcctcacacggtgtagttttggttgatggtgtcgatgtcaaggccctt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3067 caatgcccaaattcctcacacggtgtagttttggttgatggtgtcgatgtcaaggccctt 3008 Query: 361 gagcttcaccacggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3007 gagcttcaccacggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaat 2948 Query: 421 ctcag 425 ||||| Sbjct: 2947 ctcag 2943
>emb|AJ344078.1|HVU344078 Hordeum vulgare partial mRNA for plasma membrane H+-ATPase (ha1 gene) Length = 2280 Score = 819 bits (413), Expect = 0.0 Identities = 422/425 (99%) Strand = Plus / Minus Query: 1 agcaagcaagtggcagaaaatttgcagtgattatttctcgtcttgcttccgcaagatcac 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2224 agcaggcaagtggcagaaaatttgcagtgattatttctcgtcttgcttccgcaagatcac 2165 Query: 61 cgactagttaggggaaagggtaaaacgattacaccacgccgtgctccaaacacggtataa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2164 cgactagttaggggaaagggtaaaacgattacaccacgccgtgctccaaacacggtataa 2105 Query: 121 ctccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 ctccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggta 2045 Query: 181 gcactttacaactaggggctggtcaaatcagccatgtttctttcattcatgcaccggaaa 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2044 gcactttacaactaggggctggtcagatcagccatgtttctttcattcatgcaccggaaa 1985 Query: 241 aatcttaaagcggagctccattccaatctcgctccaatacggatgtcatgttgtttggtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1984 aatcttaaagcggagctccattccaatctcgctccaatacggatgtcatgttgtttggtc 1925 Query: 301 caatgcccaaattcctcacacggtgtagttttggttgatggtgtcgatgtcaaggccctt 360 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1924 caatgcccaaatttctcacacggtgtagttttggttgatggtgtcgatgtcaaggccctt 1865 Query: 361 gagcttcaccacggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1864 gagcttcaccacggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaat 1805 Query: 421 ctcag 425 ||||| Sbjct: 1804 ctcag 1800
>emb|Y09815.1|TAPSB5 T.aestivum mRNA for transmembrane proton pump, partial Length = 863 Score = 511 bits (258), Expect = e-142 Identities = 328/346 (94%), Gaps = 4/346 (1%) Strand = Plus / Minus Query: 82 aaaacgattaca-ccacgccgtgctccaaacacggtataactccactagaacattaaaac 140 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 aaaacgattacaaccacgccgtgctccaaacacggtataactccactagaacattaaaac 771 Query: 141 ctctctagaagacgggacaaccgaaaccatatatttggtagcactttacaactaggggct 200 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 ctctctagaagacggg-caaccgaaaccatatatttggtagcactttacaactaggggct 712 Query: 201 ggtcaaatcagccatgtttctttcattcatgcaccggaaaaatcttaaagcggagctcca 260 ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 711 ggtcagatcagccatgtttgtttcattcattcaccggaaaaatcttaaagcggagctcca 652 Query: 261 ttccaatctcgctccaatacggatgtcatgttgtttggtccaatgcccaaattcctcaca 320 |||||||||||||||||||||||||||||||| ||||||||||||| | | |||||||| Sbjct: 651 ttccaatctcgctccaatacggatgtcatgtttgttggtccaatgccgatactcctcaca 592 Query: 321 cggtgtagttttggttgatggtgtcgatgtcaagg-cccttgagcttcaccacggactca 379 |||||||||| |||||||||||||||||||| ||| |||||||||||||| || | ||| Sbjct: 591 cggtgtagttctggttgatggtgtcgatgtccaggccccttgagcttcacgac-cattca 533 Query: 380 acgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 532 acgtggcccttgagtgtgttgagctccctcaaccttgcaatctcag 487
>gb|AF384148.1|AF384148 Triticum aestivum H+-ATPase mRNA, partial cds Length = 437 Score = 196 bits (99), Expect = 4e-47 Identities = 114/119 (95%) Strand = Plus / Minus Query: 307 ccaaattcctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagctt 366 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 420 ccaatttcctcacacggtgtagttctggttgatggtgtcgatgtcaaggcccttgagctt 361 Query: 367 caccacggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 ||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 360 caccacggattcaacgtggcccttgagtgtgttgagcttcctcaaccttgcaatctcag 302
>gb|AY543630.1| Triticum aestivum plasma membrane H+-ATPase (ha1) mRNA, complete cds Length = 2856 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 316 tcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgga 375 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2856 tcacacggtgtagttctggttgatggtgtcgatgtcaaggcccttgagcttcaccacgga 2797 Query: 376 ctcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2796 ttcaacgtggcccttgagtgtgttgagctccctcaaccttgcaatctcag 2747
>gb|AY829002.2| Triticum aestivum plasma membrane H+-ATPase gene, promoter region and complete cds Length = 6132 Score = 168 bits (85), Expect = 9e-39 Identities = 97/101 (96%) Strand = Plus / Minus Query: 314 cctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacg 373 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6126 cctcacacggtgtagttctggttgatggtgtcgatgtcaaggcccttgagcttcaccacg 6067 Query: 374 gactcaacgtgccccttgagtgtgttgagctccctcaacct 414 || |||||||| | ||||||||||||||||||||||||||| Sbjct: 6066 gattcaacgtggctcttgagtgtgttgagctccctcaacct 6026
>emb|AJ222786.1|HVJ222786 Hordeum vulgare mRNA for H(+)-transporting ATPase-like protein, clone RG135 Length = 350 Score = 125 bits (63), Expect = 1e-25 Identities = 69/71 (97%) Strand = Plus / Minus Query: 355 gcccttgagcttcaccacggactcaacgtgccccttgagtgtgttgagctccctcaacct 414 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 350 gcccttgagcttcaccacggactcaacgtgcccctggagtgtgttgagctccctcaacct 291 Query: 415 tgcaatctcag 425 |||||||||| Sbjct: 290 agcaatctcag 280
>gb|AF480431.1| Zea mays plasma membrane H+ ATPase-like gene, partial sequence Length = 6539 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 2494 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 2553 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 2554 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 2604
>gb|AF498616.1| Zea mays cultivar C_9 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 408 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 154 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 95 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 94 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 44
>gb|AF498615.1| Zea mays cultivar D_9 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498614.1| Zea mays cultivar D_6 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498613.1| Zea mays cultivar F_1 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498612.1| Zea mays cultivar Mo17 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtgacccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498611.1| Zea mays cultivar D_7 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 410 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 156 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 97 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 96 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 46
>gb|AF498610.1| Zea mays cultivar TX601 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 395 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 154 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 95 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 94 actccacgtgacccttgagggtgttgagctccctcagcctcgcgatctcag 44
>gb|AF498609.1| Zea mays cultivar B84 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498608.1| Zea mays cultivar DE811 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498607.1| Zea mays cultivar 684 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498606.1| Zea mays cultivar D71-4HT plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498605.1| Zea mays cultivar H99 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 264 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 156 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 97 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 96 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 46
>gb|AF498604.1| Zea mays cultivar IVANA plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 414 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 160 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 101 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 100 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 50
>gb|AF498603.1| Zea mays cultivar CO109 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 412 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 158 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 99 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 98 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 48
>gb|AF498602.1| Zea mays cultivar I_1 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498601.1| Zea mays cultivar B73 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 335 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 157 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 98 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 97 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 47
>gb|AF498600.1| Zea mays cultivar F_2 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 411 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 157 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 98 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 97 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 47
>gb|AF498599.1| Zea mays cultivar G_1 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 406 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtgacccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498598.1| Zea mays cultivar B_6 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498597.1| Zea mays cultivar H_4 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 412 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 156 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 97 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 96 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 46
>gb|AF498596.1| Zea mays cultivar F_4 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498595.1| Zea mays cultivar F_3 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 410 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 156 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 97 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 96 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 46
>gb|AF498594.1| Zea mays cultivar F_5 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498593.1| Zea mays cultivar H_5 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498592.1| Zea mays cultivar H_3 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498591.1| Zea mays cultivar J40 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 397 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtgacccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498590.1| Zea mays cultivar 647 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498589.1| Zea mays cultivar B_1 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498588.1| Zea mays cultivar F_6 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498587.1| Zea mays cultivar C_5 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 413 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 159 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 100 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 99 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 49
>gb|AF498586.1| Zea mays cultivar H_1 plasma membrane H+-transporting ATPase-like protein gene, 3'UTR and partial cds Length = 404 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 157 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 98 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 97 actccacgtgacccttgagggtgttgagctccctcagcctcgcgatctcag 47
>emb|AJ441084.1|ZMA441084 Zea mays partial mRNA for proton-exporting ATPase (mha3 gene) Length = 1259 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 940 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 881 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 880 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 830
>emb|X85805.1|ZMPMHATP Z.mays mRNA for plasma membrane H+ ATPase Length = 3369 Score = 109 bits (55), Expect = 7e-21 Identities = 97/111 (87%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| |||| | Sbjct: 3053 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttagccaccg 2994 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 2993 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 2943
>gb|DQ090006.1| Puccinellia tenuiflora plasma membrane H+-ATPase mRNA, partial cds Length = 153 Score = 109 bits (55), Expect = 7e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 323 gtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacg 382 |||||||| |||||||||||||||||||| || ||||| ||||||||||| ||||| ||| Sbjct: 149 gtgtagttctggttgatggtgtcgatgtccagccccttcagcttcaccaccgactcgacg 90 Query: 383 tgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 || ||||| || ||||| ||||| |||| |||||||||||||| Sbjct: 89 tggcccttcagcgtgttcagctctctcagccttgcaatctcag 47
>emb|AJ539534.1|ZMA539534 Zea mays partial mRNA for proton-exporting ATPase (mha4 gene) Length = 1359 Score = 105 bits (53), Expect = 1e-19 Identities = 83/93 (89%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| |||||||| || | ||||||||||||||| |||||||||||||| ||||| | Sbjct: 940 ctcacaccgtgtagttctgctggatggtgtcgatgtccaggcccttgagcttgaccaccg 881 Query: 375 actcaacgtgccccttgagtgtgttgagctccc 407 |||| ||||| |||||||| ||||||||||||| Sbjct: 880 actccacgtggcccttgagggtgttgagctccc 848
>gb|AY109425.1| Zea mays CL1965_1 mRNA sequence Length = 3431 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 315 ctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgg 374 ||||||| | |||||| || | ||||| ||||||||| |||||||||||||| ||||| | Sbjct: 3062 ctcacaccgggtagttctgctggatggggtcgatgtccaggcccttgagcttgaccaccg 3003 Query: 375 actcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||| ||||| |||||||| |||||||||||||||| ||| || ||||||| Sbjct: 3002 actccacgtggcccttgagggtgttgagctccctcagcctcgcgatctcag 2952
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/100 (91%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 120 actccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggt 179 ||||||||||||| | ||||||||||||||||| |||| ||||| | ||||||||||||| Sbjct: 33498460 actccactagaacgt-aaaacctctctagaaga-ggga-aaccgga-ccatatatttggt 33498405 Query: 180 agcactttacaactaggggctggtcaaatcagccatgttt 219 ||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 33498404 agcactttacaacta-gggctgttcagatcagccatgttt 33498366 Score = 77.8 bits (39), Expect = 3e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 312 ttcctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcacca 371 |||||||||| |||||||| || | ||| ||||||||||| || ||||| |||||||||| Sbjct: 33498255 ttcctcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcacca 33498196 Query: 372 cggactcaacgtgccccttgagtgtgttgagctccctca 410 | || || ||||| |||||||| ||||| ||||| |||| Sbjct: 33498195 ccgattcgacgtggcccttgagagtgttcagctctctca 33498157
>emb|AL442117.1|H0421H08 Oryza sativa genomic DNA, chromosome X, BAC clone: H0421H08, complete sequence Length = 55574 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/100 (91%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 120 actccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggt 179 ||||||||||||| | ||||||||||||||||| |||| ||||| | ||||||||||||| Sbjct: 12017 actccactagaacgt-aaaacctctctagaaga-ggga-aaccgga-ccatatatttggt 11962 Query: 180 agcactttacaactaggggctggtcaaatcagccatgttt 219 ||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 11961 agcactttacaacta-gggctgttcagatcagccatgttt 11923 Score = 77.8 bits (39), Expect = 3e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 312 ttcctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcacca 371 |||||||||| |||||||| || | ||| ||||||||||| || ||||| |||||||||| Sbjct: 11812 ttcctcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcacca 11753 Query: 372 cggactcaacgtgccccttgagtgtgttgagctccctca 410 | || || ||||| |||||||| ||||| ||||| |||| Sbjct: 11752 ccgattcgacgtggcccttgagagtgttcagctctctca 11714
>dbj|AK105082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C08, full insert sequence Length = 2062 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/100 (91%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 120 actccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggt 179 ||||||||||||| | ||||||||||||||||| |||| ||||| | ||||||||||||| Sbjct: 1926 actccactagaacgt-aaaacctctctagaaga-ggga-aaccgga-ccatatatttggt 1871 Query: 180 agcactttacaactaggggctggtcaaatcagccatgttt 219 ||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 1870 agcactttacaacta-gggctgttcagatcagccatgttt 1832 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 312 ttcctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcacca 371 |||||||||| |||||||| || | ||| ||||||||||| || ||||| |||||||||| Sbjct: 1721 ttcctcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcacca 1662 Query: 372 cggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 | || || ||||| |||||||| ||||| ||||| |||| ||| || ||||||| Sbjct: 1661 ccgattcgacgtggcccttgagagtgttcagctctctcagcctcgcgatctcag 1608
>dbj|AK100435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088J16, full insert sequence Length = 3560 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/100 (91%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 120 actccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggt 179 ||||||||||||| | ||||||||||||||||| |||| ||||| | ||||||||||||| Sbjct: 3371 actccactagaacgt-aaaacctctctagaaga-ggga-aaccgga-ccatatatttggt 3316 Query: 180 agcactttacaactaggggctggtcaaatcagccatgttt 219 ||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 3315 agcactttacaacta-gggctgttcagatcagccatgttt 3277 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 312 ttcctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcacca 371 |||||||||| |||||||| || | ||| ||||||||||| || ||||| |||||||||| Sbjct: 3166 ttcctcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcacca 3107 Query: 372 cggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 | || || ||||| |||||||| ||||| ||||| |||| ||| || ||||||| Sbjct: 3106 ccgattcgacgtggcccttgagagtgttcagctctctcagcctcgcgatctcag 3053
>dbj|AK073066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023L01, full insert sequence Length = 2444 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/100 (91%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 120 actccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggt 179 ||||||||||||| | ||||||||||||||||| |||| ||||| | ||||||||||||| Sbjct: 2300 actccactagaacgt-aaaacctctctagaaga-ggga-aaccgga-ccatatatttggt 2245 Query: 180 agcactttacaactaggggctggtcaaatcagccatgttt 219 ||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 2244 agcactttacaacta-gggctgttcagatcagccatgttt 2206 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 312 ttcctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcacca 371 |||||||||| |||||||| || | ||| ||||||||||| || ||||| |||||||||| Sbjct: 2095 ttcctcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcacca 2036 Query: 372 cggactcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 | || || ||||| |||||||| ||||| ||||| |||| ||| || ||||||| Sbjct: 2035 ccgattcgacgtggcccttgagagtgttcagctctctcagcctcgcgatctcag 1982
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/100 (91%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 120 actccactagaacattaaaacctctctagaagacgggacaaccgaaaccatatatttggt 179 ||||||||||||| | ||||||||||||||||| |||| ||||| | ||||||||||||| Sbjct: 74749 actccactagaacgt-aaaacctctctagaaga-ggga-aaccgga-ccatatatttggt 74694 Query: 180 agcactttacaactaggggctggtcaaatcagccatgttt 219 ||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 74693 agcactttacaacta-gggctgttcagatcagccatgttt 74655 Score = 77.8 bits (39), Expect = 3e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 312 ttcctcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcacca 371 |||||||||| |||||||| || | ||| ||||||||||| || ||||| |||||||||| Sbjct: 74544 ttcctcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcacca 74485 Query: 372 cggactcaacgtgccccttgagtgtgttgagctccctca 410 | || || ||||| |||||||| ||||| ||||| |||| Sbjct: 74484 ccgattcgacgtggcccttgagagtgttcagctctctca 74446
>emb|AJ295612.1|HVU295612 Hordeum vulgare partial mRNA for plasma membrane proton ATPase (PPA1 gene) Length = 1049 Score = 83.8 bits (42), Expect = 4e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 384 gccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 gccccttgagtgtgttgagctccctcaaccttgcaatctcag 1008
>ref|XM_468274.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2853 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 318 acacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacggact 377 ||||||||||| | || | ||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 2851 acacggtgtagctctgttggattgtgtcgatgtcgagccccttgagcttcaccaccgact 2792 Query: 378 caacgtgccccttgagtgtgt 398 | |||||||||||||| |||| Sbjct: 2791 ctacgtgccccttgagcgtgt 2771
>emb|AJ440217.1|OSA440217 Oryza sativa a6 gene for plasma membrane H+-ATPase Length = 4058 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 318 acacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacggact 377 ||||||||||| | || | ||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 4056 acacggtgtagctctgttggattgtgtcgatgtcgagccccttgagcttcaccaccgact 3997 Query: 378 caacgtgccccttgagtgtgt 398 | |||||||||||||| |||| Sbjct: 3996 ctacgtgccccttgagcgtgt 3976
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 318 acacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacggact 377 ||||||||||| | || | ||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 33954343 acacggtgtagctctgttggattgtgtcgatgtcgagccccttgagcttcaccaccgact 33954284 Query: 378 caacgtgccccttgagtgtgt 398 | |||||||||||||| |||| Sbjct: 33954283 ctacgtgccccttgagcgtgt 33954263
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 318 acacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacggact 377 ||||||||||| | || | ||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 113306 acacggtgtagctctgttggattgtgtcgatgtcgagccccttgagcttcaccaccgact 113247 Query: 378 caacgtgccccttgagtgtgt 398 | |||||||||||||| |||| Sbjct: 113246 ctacgtgccccttgagcgtgt 113226
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 131582 gatggtgtcgatgtcgaggcccttgagcttgaccaccgactcgacgtggcccttgagcgt 131641 Query: 397 gttgagctccc 407 || ||||||| Sbjct: 131642 gtgcagctccc 131652
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 50702 gatggtgtcgatgtcgaggcccttgagcttgaccaccgactcgacgtggcccttgagcgt 50761 Query: 397 gttgagctccc 407 || ||||||| Sbjct: 50762 gtgcagctccc 50772
>emb|AJ440002.1|OSA440002 Oryza sativa (japonica cultivar-group) a4 gene for plasma membrane H+ ATPase, exons 1-12 Length = 3894 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 3873 gatggtgtcgatgtcgaggcccttgagcttgaccaccgactcgacgtggcccttgagcgt 3814 Query: 397 gttgagctccc 407 || ||||||| Sbjct: 3813 gtgcagctccc 3803
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 14715288 gatggtgtcgatgtcgaggcccttgagcttgaccaccgactcgacgtggcccttgagcgt 14715347 Query: 397 gttgagctccc 407 || ||||||| Sbjct: 14715348 gtgcagctccc 14715358
>dbj|AK100483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097B04, full insert sequence Length = 3538 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 3132 gatggtgtcgatgtcgaggcccttgagcttgaccaccgactcgacgtggcccttgagcgt 3073 Query: 397 gttgagctccc 407 || ||||||| Sbjct: 3072 gtgcagctccc 3062
>dbj|AK099106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O04, full insert sequence Length = 1472 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 1184 gatggtgtcgatgtcgaggcccttgagcttgaccaccgactcgacgtggcccttgagcgt 1125 Query: 397 gttgagctccc 407 || ||||||| Sbjct: 1124 gtgcagctccc 1114
>dbj|AK069666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O05, full insert sequence Length = 1472 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 ||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 1184 gatggtgtcgatgtcgaggcccttgagcttgaccaccgactcgacgtggcccttgagcgt 1125 Query: 397 gttgagctccc 407 || ||||||| Sbjct: 1124 gtgcagctccc 1114
>gb|AY107171.1| Zea mays PCO069619 mRNA sequence Length = 1102 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| |||||||| || ||||| |||||||| || ||||| || |||||||||||||| Sbjct: 840 gatggtctcgatgtcgagtcccttcagcttcacaacagactccacatgccccttgagtgt 781 Query: 397 gttgagctccctcaaccttgcaatctc 423 || ||||||| || |||||||||||| Sbjct: 780 gtgaagctcccgcagccttgcaatctc 754
>ref|XM_474175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2856 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 316 tcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgga 375 |||||| |||||||| || | ||| ||||||||||| || ||||| ||||||||||| || Sbjct: 2856 tcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcaccaccga 2797 Query: 376 ctcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 || ||||| |||||||| ||||| ||||| |||| ||| || ||||||| Sbjct: 2796 ttcgacgtggcccttgagagtgttcagctctctcagcctcgcgatctcag 2747
>emb|AJ703811.1| Cucumis sativus partial mRNA for proton-exporting ATPase (ha2 gene) Length = 1074 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtg 397 |||||||||||||| || ||||| | ||||||||| ||||| ||||| |||||||||||| Sbjct: 911 atggtgtcgatgtcgagtcccttcaacttcaccacagactcgacgtgtcccttgagtgtg 852 Query: 398 ttgagctccctcaaccttgcaatctc 423 || ||||| | | |||||||||||| Sbjct: 851 ttcagctctcggagccttgcaatctc 826
>gb|AY224445.1| Oryza sativa (japonica cultivar-group) isolate 23022 plasma membrane H+-ATPase-like protein mRNA, partial cds Length = 1512 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 316 tcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgga 375 |||||| |||||||| || | ||| ||||||||||| || ||||| ||||||||||| || Sbjct: 1512 tcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcaccaccga 1453 Query: 376 ctcaacgtgccccttgagtgtgttgagctccctcaaccttgcaatctcag 425 || ||||| |||||||| ||||| ||||| |||| ||| || ||||||| Sbjct: 1452 ttcgacgtggcccttgagagtgttcagctctctcagcctcgcgatctcag 1403
>dbj|AK121272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107A16, full insert sequence Length = 3134 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 341 gtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgt 398 ||||||||||| || ||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 2805 gtgtcgatgtcgagccccttgagcttcaccaccgactctacgtgccccttgagcgtgt 2748
>emb|AJ271439.1|PPE271439 Prunus persica mRNA for plasma membrane H+ ATPase (PPA1 gene) Length = 3344 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 341 gtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgttg 400 |||||||||||||| ||||| | ||||||| || || ||||| || || ||||||| | Sbjct: 3098 gtgtcgatgtcaagtcccttcaatctcaccaccgattctacgtgacctttcagtgtgtgg 3039 Query: 401 agctccctcaaccttgcaatctcag 425 ||||||||||||||||||||||||| Sbjct: 3038 agctccctcaaccttgcaatctcag 3014
>gb|AY029190.1| Lilium longiflorum plasma membrane H+ ATPase mRNA, complete cds Length = 3167 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtg 397 ||||||||||| || | |||||||||||||| || ||||| |||||||||||||| ||| Sbjct: 2921 atggtgtcgatatccaatcccttgagcttcacaaccgactcgacgtgccccttgagagtg 2862 Query: 398 ttgagctccctcaaccttgcaatctcag 425 | ||||||||| | ||| |||| ||||| Sbjct: 2861 tggagctccctaagcctggcaacctcag 2834
>emb|AJ440218.1|OSA440218 Oryza sativa a7 gene for plasma membrane H+-ATPase Length = 5004 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 316 tcacacggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacgga 375 |||||| |||||||| || | ||| ||||||||||| || ||||| ||||||||||| || Sbjct: 5004 tcacactgtgtagttctgctggatcgtgtcgatgtccagccccttcagcttcaccaccga 4945 Query: 376 ctcaacgtgccccttgagtgtgttgagctccctca 410 || ||||| |||||||| ||||| ||||| |||| Sbjct: 4944 ttcgacgtggcccttgagagtgttcagctctctca 4910
>gb|AY104577.1| Zea mays PCO137756 mRNA sequence Length = 1308 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtg 397 |||||||| ||||| |||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 1213 atggtgtcaatgtcgaggcccttgagcttgacgacggactcgacgtgtcccttgagcgtg 1154 Query: 398 ttgagctccct 408 | |||||||| Sbjct: 1153 tgcagctccct 1143
>dbj|AB177647.1| Daucus carota DcPA 1 mRNA for plasma membrane H+-ATPase, complete cds Length = 3201 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 341 gtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgt 398 |||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||| Sbjct: 2900 gtgtcgatgtcaagaccctttagcttcaccactgattcaacatgccccttgagagtgt 2843
>dbj|D45189.1|ZMUZHA1 Zostera marina mRNA for putative plasma membrane H+-ATPase, complete cds Length = 3250 Score = 63.9 bits (32), Expect = 4e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 320 acggtgtagttttggttgatggtgtcgatgtcaaggcccttgagcttcaccacggactca 379 ||||||||||| || | |||||| || |||||||| || || ||||||||||| ||||| Sbjct: 3002 acggtgtagttctgctggatggtttcaatgtcaagacctttaagcttcaccaccgactcc 2943 Query: 380 acgtgccccttgagtgtgttgagctccctcaaccttgcaa 419 || || ||||| || ||||| || ||||||| |||||||| Sbjct: 2942 acatgtcccttcagagtgttcagttccctcagccttgcaa 2903
>emb|AJ271438.1|PPE271438 Prunus persica mRNA for plasma membrane H+ ATPase (PPA2 gene) Length = 3371 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 341 gtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgttg 400 ||||||||||| || || ||||||||||| || |||||||| || ||||| ||||||| Sbjct: 2967 gtgtcgatgtcgagtcctttgagcttcacaactgactcaacatgacccttcagtgtgtgc 2908 Query: 401 agctccctcaaccttgcaatctcag 425 | ||||| || |||||||| ||||| Sbjct: 2907 aactcccgcagccttgcaacctcag 2883
>ref|NM_126721.2| Arabidopsis thaliana ATPase AT2G07560 mRNA, complete cds Length = 3332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 347 atgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgt 398 |||||||| |||||||||||||| || ||||||||||| || ||||| |||| Sbjct: 2879 atgtcaagacccttgagcttcactaccgactcaacgtggcctttgagagtgt 2828
>gb|BT012790.1| Lycopersicon esculentum clone 113785F, mRNA sequence Length = 3358 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 356 cccttgagcttcaccacggactcaacgtgccccttgagtgtgttgagctccctcaacctt 415 ||||| ||||| || || || ||||| || ||||| ||||||| |||||||||||||||| Sbjct: 3049 ccctttagcttgacaactgattcaacatgtcccttaagtgtgtggagctccctcaacctt 2990 Query: 416 gcaa 419 |||| Sbjct: 2989 gcaa 2986
>gb|AC007662.3| Arabidopsis thaliana chromosome 2 BAC F9A16 genomic sequence, complete sequence Length = 102249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 347 atgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgt 398 |||||||| |||||||||||||| || ||||||||||| || ||||| |||| Sbjct: 43890 atgtcaagacccttgagcttcactaccgactcaacgtggcctttgagagtgt 43839
>gb|BT002855.1| Arabidopsis thaliana clone RAFL15-05-H02 (R20351) putative plasma membrane proton ATPase (At2g07560) mRNA, partial cds Length = 1444 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 347 atgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgt 398 |||||||| |||||||||||||| || ||||||||||| || ||||| |||| Sbjct: 975 atgtcaagacccttgagcttcactaccgactcaacgtggcctttgagagtgt 924
>emb|X85804.1|PVBHA1 P.vulgaris mRNA for plasma membrane H+ ATPase Length = 3409 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 341 gtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgttg 400 ||||| |||||||| ||||| | ||||||||| ||||||||||| ||||| || || | Sbjct: 3144 gtgtcaatgtcaagccccttcaacttcaccactgactcaacgtgtccctttagagtatga 3085 Query: 401 agctccctcaaccttgcaa 419 |||||||| | |||||||| Sbjct: 3084 agctccctaagccttgcaa 3066
>dbj|AK071252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088D22, full insert sequence Length = 1702 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 1265 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 1206 Query: 397 gttgagctccctcaaccttgcaatctc 423 | ||||||||| | ||| |||||||| Sbjct: 1205 atggagctccctaagcctggcaatctc 1179
>dbj|AK067535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109J17, full insert sequence Length = 3286 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 2907 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 2848 Query: 397 gttgagctccctcaaccttgcaatctc 423 | ||||||||| | ||| |||||||| Sbjct: 2847 atggagctccctaagcctggcaatctc 2821
>ref|NM_114131.2| Arabidopsis thaliana ATPase AT3G42640 mRNA, complete cds Length = 2995 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtg 397 ||||| || |||||||| |||||||||||||| || || |||||||| ||||| || ||| Sbjct: 2825 atggtatcaatgtcaagccccttgagcttcactacagattcaacgtgaccctttagagtg 2766 Query: 398 ttgagctccctcaaccttgcaa 419 | ||||| |||| ||| |||| Sbjct: 2765 tgaagctctctcagcctcgcaa 2744
>gb|DQ103593.1| Olimarabidopsis pumila clone BAC 44L14, complete sequence Length = 118342 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtg 397 ||||| || |||||||| |||||||||||||| || || |||||||| ||||| || ||| Sbjct: 38256 atggtatcaatgtcaagtcccttgagcttcactacagattcaacgtgacccttaagagtg 38197 Query: 398 ttgagctccctcaaccttgcaa 419 | ||||| |||| ||| |||| Sbjct: 38196 tgaagctctctcagcctagcaa 38175
>dbj|D10207.1|RICOSA1 Oryza sativa OSA1 mRNA for H-ATPase, complete cds Length = 3053 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtg 397 ||||| || ||||| |||||||| |||||||| || ||||| || |||||||| || || Sbjct: 2879 atggtatcaatgtccaggcccttcagcttcacaactgactccacatgccccttcagcgta 2820 Query: 398 ttgagctccctcaaccttgcaatctc 423 | |||||||| | |||||||||||| Sbjct: 2819 tgaagctccctgagccttgcaatctc 2794
>dbj|AK068765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162E15, full insert sequence Length = 3307 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtg 397 ||||| || ||||| |||||||| |||||||| || ||||| || |||||||| || || Sbjct: 3128 atggtatcaatgtccaggcccttcagcttcacaactgactccacatgccccttcagcgta 3069 Query: 398 ttgagctccctcaaccttgcaatctc 423 | |||||||| | |||||||||||| Sbjct: 3068 tgaagctccctgagccttgcaatctc 3043
>gb|AY347715.1| Juglans regia plasma membrane H+-ATPase (AHA1) mRNA, complete cds Length = 3205 Score = 50.1 bits (25), Expect = 0.006 Identities = 70/85 (82%) Strand = Plus / Minus Query: 341 gtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgttg 400 ||||| |||||||||||||| || ||||||| || || || ||||| || ||||| ||| Sbjct: 2846 gtgtctatgtcaaggcccttcagtctcaccacagattccacatgccctttcagtgtattg 2787 Query: 401 agctccctcaaccttgcaatctcag 425 || || |||| ||||||||| |||| Sbjct: 2786 agttctctcagccttgcaatttcag 2762
>emb|AL138640.1|ATT12K4 Arabidopsis thaliana DNA chromosome 3, BAC clone T12K4 Length = 108879 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgcccctt 390 ||||| || |||||||| |||||||||||||| || || |||||||| ||||| Sbjct: 57998 atggtatcaatgtcaagccccttgagcttcactacagattcaacgtgaccctt 57946
>dbj|AB086372.1| Sesbania rostrata srha1 mRNA for plasma membrane H+-ATPase, complete cds Length = 3371 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 362 agcttcaccacggactcaacgtgcccctt 390 ||||||||||| ||||||||||||||||| Sbjct: 2963 agcttcaccactgactcaacgtgcccctt 2935
>emb|X66737.1|NPPMA4 N.plumbaginifolia pma4 mRNA for plasma membrane H+-ATPase Length = 3321 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 362 agcttcaccacggactcaacgtgccccttgag 393 ||||||||||| ||||||||||| |||||||| Sbjct: 2918 agcttcaccaccgactcaacgtgacccttgag 2887
>emb|AJ440001.1|OSA440001 Oryza sativa (japonica cultivar-group) a3 gene for plasma membrane H+ ATPase, exons 1-21 Length = 6072 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 6051 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 5992 Query: 397 gttgagctccct 408 | ||||||||| Sbjct: 5991 atggagctccct 5980
>gb|AF156679.1|SEG_NPPMA6A4 Nicotiana plumbaginifolia plasma membrane proton ATPase (pma6) gene, exons 6-15 and complete cds Length = 3310 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 347 atgtcaaggcccttgagcttcaccacggactcaacgtgcccctt 390 |||||||| ||||||||||||||||| || || || |||||||| Sbjct: 3193 atgtcaagtcccttgagcttcaccactgattctacatgcccctt 3150
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 27429461 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 27429402 Query: 397 gttgagctccct 408 | ||||||||| Sbjct: 27429401 atggagctccct 27429390
>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 55237 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Plus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 52357 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 52416 Query: 397 gttgagctccct 408 | ||||||||| Sbjct: 52417 atggagctccct 52428
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 27355061 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 27355002 Query: 397 gttgagctccct 408 | ||||||||| Sbjct: 27355001 atggagctccct 27354990
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 5375 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 5316 Query: 397 gttgagctccct 408 | ||||||||| Sbjct: 5315 atggagctccct 5304
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Minus Query: 337 gatggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgt 396 |||||| || ||||| ||||| ||||||||||| || || || || ||||||||||| || Sbjct: 97781 gatggtctcaatgtcgaggcctttgagcttcacaaccgattctacatgccccttgagcgt 97722 Query: 397 gttgagctccct 408 | ||||||||| Sbjct: 97721 atggagctccct 97710
>dbj|AP004914.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02A14, TM0072b, complete sequence Length = 28924 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 356 cccttgagcttcaccacggactcaacgtgcccctt 390 ||||| ||||||||||| ||||||||||| ||||| Sbjct: 12299 cccttcagcttcaccactgactcaacgtgtccctt 12265
>dbj|AB177650.1| Daucus carota DcPA 4 mRNA for plasma membrane H+-ATPase, complete cds Length = 3283 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 341 gtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgcccctt 390 |||||||| || | ||| |||||||||||||| ||||| ||||| ||||| Sbjct: 2962 gtgtcgatatccaagcctttgagcttcaccaccgactcgacgtgtccctt 2913
>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21, complete sequence Length = 131428 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tttggtagcactttacaacta 194 ||||||||||||||||||||| Sbjct: 112529 tttggtagcactttacaacta 112509
>gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete sequence Length = 127843 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 362 agcttcaccacggactcaacgtgccccttgagtgtgt 398 ||||||||||| || ||||| || ||||||||||||| Sbjct: 43031 agcttcaccacagattcaacatgtcccttgagtgtgt 42995
>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence Length = 165679 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 362 agcttcaccacggactcaacgtgccccttgagtgtgt 398 ||||||||||| || ||||| || ||||||||||||| Sbjct: 44921 agcttcaccacagattcaacatgtcccttgagtgtgt 44957
>emb|X76535.1|STDPHA2 S.tuberosum L. (Desiree) PHA2 mRNA Length = 3146 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 362 agcttcaccacggactcaacgtgccccttgagtgtgt 398 ||||||||||| || ||||| || ||||||||||||| Sbjct: 2876 agcttcaccactgattcaacatgacccttgagtgtgt 2840
>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence Length = 177312 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tttggtagcactttacaacta 194 ||||||||||||||||||||| Sbjct: 40685 tttggtagcactttacaacta 40705
>gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete sequence Length = 132056 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 350 tcaaggcccttgagcttcaccacggactcaacgtgcccctt 390 ||||| |||||||||||||| || || |||||||| ||||| Sbjct: 73945 tcaagccccttgagcttcactacagattcaacgtgaccctt 73905
>gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence Length = 83679 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 338 atggtgtcgatgtcaaggcccttgagcttcaccacggactcaacgtgcccctt 390 ||||| || |||||||| |||||||||||||| || || ||||| || ||||| Sbjct: 77063 atggtatcaatgtcaagacccttgagcttcacgacagattcaacatgaccctt 77115
>emb|BX548055.7| Zebrafish DNA sequence from clone CH211-246K22 in linkage group 20, complete sequence Length = 105935 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 catatatttggtagcacttta 188 ||||||||||||||||||||| Sbjct: 100126 catatatttggtagcacttta 100146
>gb|U72148.1|LEU72148 Lycopersicon esculentum plasma membrane H+-ATPase (LHA4) gene, complete cds Length = 6938 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 362 agcttcaccacggactcaacgtgccccttgagtgtgt 398 ||||||||||| || ||||| || ||||||||||||| Sbjct: 6470 agcttcaccactgattcaacatgacccttgagtgtgt 6434
>gb|AY632359.1| Gossypium hirsutum BAC 155C17, complete sequence Length = 103930 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 agcttcaccacggactcaac 381 |||||||||||||||||||| Sbjct: 26201 agcttcaccacggactcaac 26182
>ref|XM_817535.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.3570) partial mRNA Length = 11706 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 tctctagaagacgggacaac 161 |||||||||||||||||||| Sbjct: 5830 tctctagaagacgggacaac 5811
>gb|AC079175.24| Homo sapiens Xp BAC RP11-122N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163198 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 agaaaatttgcagtgattat 34 |||||||||||||||||||| Sbjct: 121205 agaaaatttgcagtgattat 121224
>emb|BX510360.8| Zebrafish DNA sequence from clone DKEY-265A7 in linkage group 2, complete sequence Length = 213323 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 aaatcagccatgtttctttcattc 228 |||| ||||||||||||||||||| Sbjct: 183955 aaattagccatgtttctttcattc 183932
>gb|AY383599.2| Nicotiana tabacum proton P-ATPase (nha1) mRNA, complete cds Length = 3347 Score = 40.1 bits (20), Expect = 5.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 356 cccttgagcttcaccacggactcaacgtgccccttgagtgtgttgagctccctcaacctt 415 ||||| ||||| ||||| || ||||| || ||||| || |||| ||||| ||||||||| Sbjct: 3017 ccctttagcttgaccactgattcaacatgtccctttagagtgtgtagctctctcaacctt 2958 Query: 416 gcaa 419 |||| Sbjct: 2957 gcaa 2954
>gb|AC067937.1|AC067937 Neurospora crassa chromosome 7, clone X11-G8, complete sequence Length = 43556 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gatggtgtcgatgtcaaggc 356 |||||||||||||||||||| Sbjct: 22122 gatggtgtcgatgtcaaggc 22141
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11 Length = 46353 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gatggtgtcgatgtcaaggc 356 |||||||||||||||||||| Sbjct: 17824 gatggtgtcgatgtcaaggc 17843
>emb|BX649250.6| Zebrafish DNA sequence from clone DKEY-53B2 in linkage group 20, complete sequence Length = 165729 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tatttggtagcactttacaa 191 |||||||||||||||||||| Sbjct: 127450 tatttggtagcactttacaa 127431
>dbj|AB177651.1| Daucus carota DcPA 5 mRNA for plasma membrane H+-ATPase, complete cds Length = 3195 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Minus Query: 347 atgtcaaggcccttgagcttcaccacggactcaacgtgccccttgagtgtgt 398 ||||| ||||| || ||||||||||| || ||||| || |||||||| |||| Sbjct: 2983 atgtcgaggccttttagcttcaccacagattcaacatgtcccttgagagtgt 2932
>emb|BX511112.6| Zebrafish DNA sequence from clone DKEY-188G12 in linkage group 20, complete sequence Length = 139580 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 aaatcagccatgtttctttcattc 228 |||| ||||||||||||||||||| Sbjct: 5123 aaattagccatgtttctttcattc 5100
>emb|CR972866.3| RP43-009N23, complete sequence Length = 201804 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 agaaaatttgcagtgattat 34 |||||||||||||||||||| Sbjct: 6024 agaaaatttgcagtgattat 6005 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,199,948 Number of Sequences: 3902068 Number of extensions: 3199948 Number of successful extensions: 56862 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56575 Number of HSP's gapped (non-prelim): 272 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
