ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl19b02 |
|---|---|
| Clone Library Name | barley_pub |
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 68.2 bits (165), Expect = 5e-12 Identities = 28/49 (57%), Positives = 41/49 (83%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPVGS 229 V+FQ+II++ LG FA+TTP +L +W I++GF+GMP+AA +K+IPVGS Sbjct: 971 VVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPVGS 1019
>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma membrane-type| (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) Length = 1015 Score = 63.9 bits (154), Expect = 9e-11 Identities = 29/47 (61%), Positives = 38/47 (80%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 V FQIII++FLG FA+TTP ++ +WF I +GF+GMPIAA +K IPV Sbjct: 969 VFFQIIIIEFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015
>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 2) Length = 1014 Score = 62.8 bits (151), Expect = 2e-10 Identities = 29/47 (61%), Positives = 37/47 (78%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 V FQIII++FLG FA+TTP ++ +W I IGF+GMPIAA +K IPV Sbjct: 968 VFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014
>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 4) Length = 1030 Score = 54.7 bits (130), Expect = 5e-08 Identities = 25/50 (50%), Positives = 36/50 (72%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPVGSQ 226 V+FQ+IIV+FLG FA+T P S + W I+IG + M +A I+K +PV S+ Sbjct: 962 VVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSLNMIVAVILKCVPVESR 1011
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/47 (48%), Positives = 33/47 (70%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 ++ Q+IIV+FLG FA+TT + K+W C+ IG I P+A + K IPV Sbjct: 1001 LVLQVIIVEFLGKFASTTKLNWKQWLICVGIGVISWPLALVGKFIPV 1047
>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) Length = 1025 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/47 (53%), Positives = 33/47 (70%) Frame = -2 Query: 369 FQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPVGS 229 FQ+IIV+FLG FA+T P S + W CI+IG + M +A +K IPV S Sbjct: 961 FQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLKCIPVES 1007
>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) Length = 1069 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/47 (51%), Positives = 32/47 (68%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 ++ Q++IV+FLG FA+TT + W CI IG I P+A I KLIPV Sbjct: 1003 IVLQVVIVEFLGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPV 1049
>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma membrane-type| (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) Length = 1073 Score = 47.8 bits (112), Expect = 7e-06 Identities = 23/46 (50%), Positives = 30/46 (65%) Frame = -2 Query: 372 IFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 I QIIIV FLG FA+T + W + I+IG + P+A + KLIPV Sbjct: 1006 ILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPV 1051
>ACA13_ARATH (Q9LIK7) Putative calcium-transporting ATPase 13, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 13) Length = 1017 Score = 41.6 bits (96), Expect = 5e-04 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 V+ Q+++V+FL FA+T +L +W CI I PI +VK +PV Sbjct: 956 VVLQVVMVEFLKRFADTERLNLGQWGVCIAIAAASWPIGWLVKSVPV 1002
>ACA12_ARATH (Q9LY77) Putative calcium-transporting ATPase 12, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 12) Length = 1033 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -2 Query: 375 VIFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 ++ Q+I+V+FL FA+T + +W +CI + + PI K IPV Sbjct: 960 IVLQVIMVEFLKKFADTVRLNGWQWGTCIALASLSWPIGFFTKFIPV 1006
>ATC1_DICDI (P54678) Probable calcium-transporting ATPase PAT1 (EC 3.6.3.-)| Length = 1115 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -2 Query: 366 QIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPV 235 QII V F G +T + EW C+V+G I +P+ +++ IP+ Sbjct: 926 QIIFVTFGGSATSTDSLYIVEWICCVVVGAISLPVGLLLRKIPI 969
>AT2B2_MOUSE (Q9R0K7) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) Length = 1198 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 Query: 366 QIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIP 238 QI+IVQF G + +P L +W CI IG + ++ IP Sbjct: 998 QIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELVWGQVIATIP 1040
>AT2B2_RAT (P11506) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) Length = 1243 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 Query: 366 QIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIP 238 QI+IVQF G + +P L +W CI IG + ++ IP Sbjct: 1043 QIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELVWGQVIATIP 1085
>AT2B2_HUMAN (Q01814) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) Length = 1243 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 Query: 366 QIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIP 238 QI+IVQF G + +P L +W CI IG + ++ IP Sbjct: 1043 QIVIVQFGGKPFSCSPLQLDQWMWCIFIGLGELVWGQVIATIP 1085
>AT2B3_RAT (Q64568) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)| (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma membrane calcium ATPase isoform 3) Length = 1258 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -2 Query: 366 QIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIP 238 QI+IVQF G + +P S ++W C+ +G + ++ IP Sbjct: 1017 QIVIVQFGGKPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIP 1059
>AT2B3_HUMAN (Q16720) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)| (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma membrane calcium ATPase isoform 3) Length = 1220 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -2 Query: 366 QIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIP 238 QI+IVQF G + +P S ++W C+ +G + ++ IP Sbjct: 1017 QIVIVQFGGKPFSCSPLSTEQWLWCLFVGVGELVWGQVIATIP 1059
>SCRB_KLEPN (P27217) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase)| (Invertase) Length = 465 Score = 30.8 bits (68), Expect = 0.84 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +1 Query: 136 TTAPELHWRHQPLVLLPD 189 ++A LHWRH+P+ L+PD Sbjct: 73 SSADLLHWRHEPIALMPD 90
>AT2B2_OREMO (P58165) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) (Fragment) Length = 1112 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -2 Query: 366 QIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIP 238 QI+IVQF G + P L++W C+ +G + ++ IP Sbjct: 1026 QIVIVQFGGKPFSCQPLDLEKWMWCVFLGLGELVWGQVIATIP 1068
>AT2B4_HUMAN (P23634) Plasma membrane calcium-transporting ATPase 4 (EC 3.6.3.8)| (PMCA4) (Plasma membrane calcium pump isoform 4) (Plasma membrane calcium ATPase isoform 4) Length = 1241 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -2 Query: 372 IFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIPVGS 229 I QI IV+F G + T SL +W C+ IG + + IP S Sbjct: 1006 ICQIFIVEFGGKPFSCTSLSLSQWLWCLFIGIGELLWGQFISAIPTRS 1053
>OPGH_XANCP (Q8P532) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 645 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -2 Query: 348 FLGDFANTTPPSLKEWFSCIVIGF-IGMPIAAIVKLIPVG 232 F+G A PSL W + +++G + +P+ A+ L G Sbjct: 568 FMGTLAYLVSPSLAAWMAPVIVGMVVSIPVVAVTSLRRTG 607
>SCRB_SALTY (P37075) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase)| (Invertase) Length = 466 Score = 28.5 bits (62), Expect = 4.1 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = +1 Query: 151 LHWRHQPLVLLPD 189 LHW+H+P+ L+PD Sbjct: 79 LHWQHEPIALMPD 91
>DNSL1_HUMAN (P49184) Deoxyribonuclease I-like 1 precursor (EC 3.1.21.-) (DNase| I-like 1) (Muscle-specific DNase I-like) (DNase X) (XIB) Length = 302 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 154 HWRHQPLVLLPDFSS*PEISCRLLLRTHRDKLDYRSD 264 HW+ + ++LL DF++ C L + DKL+ R++ Sbjct: 171 HWQSKDVILLGDFNA----DCASLTKKRLDKLELRTE 203
>DNSL1_CERAE (Q2QDF1) Deoxyribonuclease I-like 1 precursor (EC 3.1.21.-) (DNase| I-like 1) (DNase X) Length = 302 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 154 HWRHQPLVLLPDFSS*PEISCRLLLRTHRDKLDYRSD 264 HW+ + ++LL DF++ C L + DKL+ R++ Sbjct: 171 HWQSKDVILLGDFNA----DCASLTKKRLDKLELRTE 203
>SL9A3_HUMAN (P48764) Sodium/hydrogen exchanger 3 (Na(+)/H(+) exchanger 3)| (NHE-3) (Solute carrier family 9 member 3) Length = 834 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -1 Query: 118 LSAINPFYLGESMAFFFLLHLIFRGRAKTVGLILQKCLI 2 +SA+NPF + AF LL L+F + +G++LQ L+ Sbjct: 356 ISAVNPFIWTWNTAFV-LLTLVFISVYRAIGVVLQTWLL 393
>AT2B1_RABIT (Q00804) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) Length = 1249 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -2 Query: 372 IFQIIIVQFLGDFANTTPPSLKEWFSCIVIGFIGMPIAAIVKLIP 238 + QIIIVQF G + + S+++W I +G + ++ IP Sbjct: 1018 VVQIIIVQFAGKPFSCSELSVEQWLWSIFLGMGTLLWGQLISTIP 1062
>YL92_SCHPO (Q9HFF2) Hypothetical protein C683.02c in chromosome I| Length = 218 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +2 Query: 20 NQAHSLGSSSKDQMQKKKEGHRFT*IKRINSRKNS---FLCSQQ 142 N S GSS + ++KK+ + ++RIN R F C QQ Sbjct: 42 NMKASFGSSKRYDERQKKKRSEYRRLRRINQRNRDKFCFACRQQ 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,293,459 Number of Sequences: 219361 Number of extensions: 902319 Number of successful extensions: 2011 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1998 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2011 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
