>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3|
           domains) (Adapter protein CMS)
          Length = 639

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +2

Query: 62  PQKKGAVSTSKQKCQ*VPI---ETESRLKSTARLRI*FLFSLTDDPQLLEKGGELPHVLL 232
           P+K   + +   K Q V I   +TE ++K+    R  F +  T++ +L  K GE+ H++ 
Sbjct: 241 PEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLIS 300

Query: 233 LDTG 244
            +TG
Sbjct: 301 KETG 304

>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 1264

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -2

Query: 271  ASGYKKKAPPSVQEEDMRKLPAFFEQLRVIGEA 173
            ASGY  K P  VQE D  KL     +LR + EA
Sbjct: 1224 ASGYSAKVPLEVQEADEVKLQQTEAELRKVDEA 1256

>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS) (Protein G7a)
          Length = 1264

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -2

Query: 271  ASGYKKKAPPSVQEEDMRKLPAFFEQLRVIGEA 173
            ASGY  K P  VQE D  KL     +LR + EA
Sbjct: 1224 ASGYPVKVPLEVQEADEAKLQQTEAELRKVDEA 1256

>PAK7_HUMAN (Q9P286) Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1)|
           (p21-activated kinase 7) (PAK-7) (PAK-5)
          Length = 719

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 123 QRADSKAPPDYAFSFF-SASPMTRSCSKKAGSFLMSSSW 236
           QRA S +P DY+F F  S +  T  CSK++ ++   S W
Sbjct: 220 QRASSSSPLDYSFQFTPSRTAGTSGCSKESLAY-SESEW 257

>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS) (Protein G7a)
          Length = 1263

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -2

Query: 271  ASGYKKKAPPSVQEEDMRKLPAFFEQLRVIGEA 173
            AS Y  K P  VQE D  KL     +LR + EA
Sbjct: 1223 ASSYSAKVPLEVQEADEAKLQQTEAELRKVDEA 1255

>Y436_MYCPN (P75342) Hypothetical lipoprotein MG307 homolog precursor|
           (A05_orf1244)
          Length = 1244

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 48  DITTIRKKKVQYQLPNKNASRSQ*KQRADSKAPPDYAFSFFS 173
           D T I +   +Y  P++   +   +++   K  P YAF FF+
Sbjct: 222 DPTLISQVNYKYSAPSQGLGQIYNREKLKDKLTPSYAFPFFA 263


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,975,628
Number of Sequences: 219361
Number of extensions: 750092
Number of successful extensions: 2307
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)