>DP2L_ARCFU (O28552) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)|
          Length = 1143

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 277 CDLAGSTTHQGFYCPSGR 330
           CD+ G  T Q +YCPS R
Sbjct: 663 CDVCGELTEQLYYCPSCR 680

>Y013_RICCN (Q92JQ4) Hypothetical UPF0079 protein RC0013|
          Length = 175

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 292 ILPNHKDLPTNSSTITKVHDEPFFSTSLYIK 200
           I+ NHK+    SS I  + D P F T L I+
Sbjct: 134 IITNHKENSQESSLIDFLQDSPLFDTKLDIQ 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,283,405
Number of Sequences: 219361
Number of extensions: 1080176
Number of successful extensions: 1897
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1897
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)