ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl19a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZNF26_HUMAN (P17031) Zinc finger protein 26 (Zinc finger protein... 28 9.0

>ZNF26_HUMAN (P17031) Zinc finger protein 26 (Zinc finger protein KOX20)|
          Length = 199

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 8   SDCTDLYQIRMKITDHTRILASQTMTKMSACPASSCW 118
           S+C   +  +  +++H R+   +   K S C  S CW
Sbjct: 151 SECGKAFTQKSSLSEHQRVHTGEKPWKCSECGKSFCW 187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,623,125
Number of Sequences: 219361
Number of extensions: 307077
Number of successful extensions: 836
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 80,573,946
effective HSP length: 28
effective length of database: 74,431,838
effective search space used: 1786364112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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