Clone Name | rbastl19a10 |
---|---|
Clone Library Name | barley_pub |
>emb|CR354401.17| Zebrafish DNA sequence from clone CH211-101C7 in linkage group 12, complete sequence Length = 168372 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tagttacatcacaaatgtat 141 |||||||||||||||||||| Sbjct: 110978 tagttacatcacaaatgtat 110959
>emb|CR293518.13| Zebrafish DNA sequence from clone CH211-129L10 in linkage group 12, complete sequence Length = 196374 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tagttacatcacaaatgtat 141 |||||||||||||||||||| Sbjct: 146452 tagttacatcacaaatgtat 146433
>emb|CT573313.6| H.melpomene DNA sequence from clone AEHM-46M10, complete sequence Length = 112576 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tagttacatcacaaatgtat 141 |||||||||||||||||||| Sbjct: 41211 tagttacatcacaaatgtat 41192
>ref|NM_100336.2| Arabidopsis thaliana transporter AT1G04570 mRNA, complete cds Length = 1935 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 gtatagttacatcacaaat 137 ||||||||||||||||||| Sbjct: 1811 gtatagttacatcacaaat 1829
>gb|AC127415.3| Mus musculus BAC clone RP23-450L4 from chromosome 19, complete sequence Length = 177302 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 agttacatcacaaatgtat 141 ||||||||||||||||||| Sbjct: 106883 agttacatcacaaatgtat 106901
>gb|AC102125.13| Mus musculus chromosome 6, clone RP23-190E16, complete sequence Length = 219870 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 112 ttgttgggtatagttacat 130 ||||||||||||||||||| Sbjct: 48601 ttgttgggtatagttacat 48619
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 agttacatcacaaatgtat 141 ||||||||||||||||||| Sbjct: 14417 agttacatcacaaatgtat 14435
>gb|AC124568.3| Mus musculus BAC clone RP23-145K4 from 14, complete sequence Length = 222946 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 120 tatagttacatcacaaatg 138 ||||||||||||||||||| Sbjct: 134031 tatagttacatcacaaatg 134013
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 catacacgtatacttgcat 71 ||||||||||||||||||| Sbjct: 928026 catacacgtatacttgcat 928008
>emb|AL161507.2|ATCHRIV19 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 19 Length = 183181 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 112 ttgttgggtatagttacat 130 ||||||||||||||||||| Sbjct: 24554 ttgttgggtatagttacat 24572
>emb|BX649630.9| Zebrafish DNA sequence from clone DKEY-125B7 in linkage group 21, complete sequence Length = 124133 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aacgatgacaaaaatgagt 94 ||||||||||||||||||| Sbjct: 55445 aacgatgacaaaaatgagt 55427
>dbj|AK117774.1| Arabidopsis thaliana At1g04570 mRNA for unknown protein, complete cds, clone: RAFL17-45-O17 Length = 1935 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 gtatagttacatcacaaat 137 ||||||||||||||||||| Sbjct: 1811 gtatagttacatcacaaat 1829
>gb|AF147259.1|F10A2 Arabidopsis thaliana BAC F10A2 Length = 123080 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 112 ttgttgggtatagttacat 130 ||||||||||||||||||| Sbjct: 81536 ttgttgggtatagttacat 81554
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 123 agttacatcacaaatgtat 141 ||||||||||||||||||| Sbjct: 267025 agttacatcacaaatgtat 267007
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 gtatagttacatcacaaat 137 ||||||||||||||||||| Sbjct: 86230 gtatagttacatcacaaat 86248
>gb|AC161882.5| Mus musculus BAC clone RP23-134E24 from chromosome 16, complete sequence Length = 206219 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 121 atagttacatcacaaatgt 139 ||||||||||||||||||| Sbjct: 45270 atagttacatcacaaatgt 45252 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,244,247 Number of Sequences: 3902068 Number of extensions: 1244247 Number of successful extensions: 85855 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85816 Number of HSP's gapped (non-prelim): 39 length of query: 160 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 138 effective length of database: 17,147,199,772 effective search space: 2366313568536 effective search space used: 2366313568536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)