>gb|AC117503.8| Homo sapiens 12 BAC RP11-338K17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 218476

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     aaatgaaaggaacagatctca 60
              |||||||||||||||||||||
Sbjct: 131912 aaatgaaaggaacagatctca 131892

>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    tacaagaacatggcaaacaa 140
              ||||||||||||||||||||
Sbjct: 407989 tacaagaacatggcaaacaa 407970

>ref|XM_746313.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g14260)
           partial mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 ccctttttgtggatgaacca 216
           ||||||||||||||||||||
Sbjct: 512 ccctttttgtggatgaacca 493

>emb|CR936846.7| Zebrafish DNA sequence from clone DKEY-20N3 in linkage group 1,
             complete sequence
          Length = 80060

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   caaacaacaattctaatgtc 153
             ||||||||||||||||||||
Sbjct: 35637 caaacaacaattctaatgtc 35656

>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete
              sequence
          Length = 203967

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     ccaggtaaaaatgaaaggaa 51
              ||||||||||||||||||||
Sbjct: 140284 ccaggtaaaaatgaaaggaa 140303

>emb|AL159159.21| Human DNA sequence from clone RP11-88J11 on chromosome 13 Contains the
             3' end of the CDK8 gene for cyclin-dependent kinase 8,
             complete sequence
          Length = 144626

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    ggaacagatctcaactcaca 67
             ||||||||||||||||||||
Sbjct: 17746 ggaacagatctcaactcaca 17727

>gb|AC073365.14| Homo sapiens 3 BAC RP11-479M14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179598

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   aacatggcaaacaacaattc 146
             ||||||||||||||||||||
Sbjct: 55044 aacatggcaaacaacaattc 55025

>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aaaatgaaaggaacagatct 58
              ||||||||||||||||||||
Sbjct: 382781 aaaatgaaaggaacagatct 382762

>gb|AC009303.3| Homo sapiens BAC clone RP11-98C1 from 2, complete sequence
          Length = 198652

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 257    caaggctctacaggaacagggcaa 280
              |||||||||||||||| |||||||
Sbjct: 169450 caaggctctacaggaatagggcaa 169427

>emb|CT574565.2| Pan troglodytes chromosome X clone CH251-78I22 map Xq28, complete
             sequence
          Length = 170088

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ctcccaggtaaaaatgaaag 48
             ||||||||||||||||||||
Sbjct: 89048 ctcccaggtaaaaatgaaag 89029

>emb|AL928682.11| Mouse DNA sequence from clone RP23-143K9 on chromosome X, complete
             sequence
          Length = 135431

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    gtaaaaatgaaaggaacaga 55
             ||||||||||||||||||||
Sbjct: 82279 gtaaaaatgaaaggaacaga 82298

>emb|AL731828.22| Mouse DNA sequence from clone RP23-50L5 on chromosome X, complete
              sequence
          Length = 228327

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    atgaacttgaaacagatgag 322
              ||||||||||||||||||||
Sbjct: 124983 atgaacttgaaacagatgag 124964

>emb|AL732405.8| Mouse DNA sequence from clone RP23-149P4 on chromosome X, complete
             sequence
          Length = 193425

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    gaaaggaacagatctcaact 63
             ||||||||||||||||||||
Sbjct: 51224 gaaaggaacagatctcaact 51205

>gb|AC092891.5| Homo sapiens 12 BAC RP11-495C19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 109440

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  taaccctttttgtggatgaa 213
            ||||||||||||||||||||
Sbjct: 2952 taaccctttttgtggatgaa 2933


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,603,311
Number of Sequences: 3902068
Number of extensions: 3603311
Number of successful extensions: 75433
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75400
Number of HSP's gapped (non-prelim): 33
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)