ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl19a07 |
|---|---|
| Clone Library Name | barley_pub |
>BCK2_YEAST (P33306) Protein BCK2 (Bypass of kinase C protein)| Length = 851 Score = 36.6 bits (83), Expect = 0.015 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 2/108 (1%) Frame = +2 Query: 17 RHHGTRTKNKHQNSSKRRSGAQPAFHTTARIQFRLSPSCILTRKPCTTLGYTLQSKISES 196 +H K H+ + S AQ H+ + I +PS L P GYTL S S S Sbjct: 472 QHKSGSVKGGHRKKQESISDAQRIQHSNSYIT---TPSSSLVTPPYYMTGYTLPSSASAS 528 Query: 197 SLPS-FAFHGLQLIHAYIGSGETGSTLRPFPCFSSATK-FAASREPSG 334 S P+ H + ++ S T ++ RP FSS K ++ + SG Sbjct: 529 STPNVLETHNMN----FVPSTSTVTSYRPSSNFSSFDKEYSNENDASG 572
>SPB4_ASPOR (Q2UBZ5) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 31.6 bits (70), Expect = 0.48 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Frame = +2 Query: 80 QPAFHTTARIQFRLSPSCI-LTRKPCTTLGYTLQSKISESSLPSFAFHGLQLIHAYIGSG 256 +P T++R +SPS + +++G+T + + S++P F H ++ A GSG Sbjct: 4 KPPAGTSSRAWDGVSPSLSEWVLEAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSG 63 Query: 257 ETGSTLRP 280 +T S L P Sbjct: 64 KTLSFLIP 71
>SPB4_EMENI (Q5B8F4) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +2 Query: 155 TTLGYTLQSKISESSLPSFAFHGLQLIHAYIGSGETGSTLRP 280 +++G+T + + S++P F H ++ A GSG+T S L P Sbjct: 30 SSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIP 71
>SPB4_ASPFU (Q4WYJ7) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 640 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +2 Query: 155 TTLGYTLQSKISESSLPSFAFHGLQLIHAYIGSGETGSTLRP 280 +++G+T + + S++P F H ++ A GSG+T S L P Sbjct: 30 SSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIP 71
>RAD22_SCHPO (P36592) DNA repair and recombination protein rad22| Length = 469 Score = 30.0 bits (66), Expect = 1.4 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 3/112 (2%) Frame = +3 Query: 9 HPKGTTAHAPKINIKTVPKDAAGHN--LPFIQQHEYSFGCPRHAFLLGNPVQRWVTPYSP 182 HP H+ K + KD HN P + H Y P++ + V VT SP Sbjct: 264 HPAANNHHSEKAGTQINNKDKGSHNSAKPVQRSHTYPVAVPQNT---SDSVGNAVTDTSP 320 Query: 183 KSQRAPYRVLPSTAFS*YTHI*AQEKLGAPSVRSLASPQRQNLQP-LGSPLV 335 K+ P + P+T I A+ A V +++P N P L SP + Sbjct: 321 KTLFDPLK--PNTGTPSPKFISARAAAAAEGV--VSAPFTNNFNPRLDSPSI 368
>IPPK_DROME (Q9W2Q7) Inositol-pentakisphosphate 2-kinase (EC 2.7.1.-)| (Inositol-1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (DmIpk1) Length = 621 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +2 Query: 8 TPKRHHGTRTKNKHQNSSKRRSGAQPAFHTTARIQ----FRLSPSCILTR 145 TP T ++N +QN S++ + +PA T A+ FRL +C+L + Sbjct: 530 TPAEAASTTSRNVNQNESQKLNRNEPANQTQAQNNKTEIFRLPKNCVLQK 579
>COA1_SHEEP (Q28559) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2346 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 7/61 (11%) Frame = +1 Query: 169 HLTVQNLRELPTEFCLPRPSVNTRIYRLRRNWE-------HPPSVPLLLLSDKICSL*GA 327 H + NL + +CLP P ++R+ ++W PS+PLL L D + S+ G Sbjct: 854 HYVLDNLVNVMNGYCLPDPFFSSRV----KDWVEGLMKTLRDPSLPLLELQDIMTSVSGR 909 Query: 328 L 330 + Sbjct: 910 I 910
>COA1_BOVIN (Q9TTS3) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2346 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +1 Query: 169 HLTVQNLRELPTEFCLPRPSVNTR----IYRLRRNWEHPPSVPLLLLSDKICSL*GAL 330 H + NL + +CLP P ++R + RL + PS+PLL L D + S+ G + Sbjct: 854 HYVLDNLVNVMNGYCLPDPFFSSRVKDWVERLMKTL-RDPSLPLLELQDIMTSVSGRI 910
>PERL_BOVIN (P80025) Lactoperoxidase precursor (EC 1.11.1.7) (LPO)| Length = 712 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +3 Query: 138 LLGNPVQRWVTPYSPKSQRAPYRVLPSTAFS*YTHI*AQEKLGAPSVRSLASPQRQNLQP 317 +LG+ +Q+W+ PY + R+ F+ + G V S S +N QP Sbjct: 433 VLGSEMQKWIPPYQGYNNSVDPRISNVFTFA--------FRFGHMEVPSTVSRLDENYQP 484 Query: 318 LG--SPLVAHDI*VNSYRLWK 374 G + L H + N++R+ K Sbjct: 485 WGPEAELPLHTLFFNTWRIIK 505
>COAC_CHICK (P11029) Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC) [Includes: Biotin| carboxylase (EC 6.3.4.14)] Length = 2324 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +1 Query: 169 HLTVQNLRELPTEFCLPRPSVNTR----IYRLRRNWEHPPSVPLLLLSDKICSL*GAL 330 H + NL + +CLP P +++ + RL + PS+PLL L D + S+ G + Sbjct: 854 HYVLDNLVNVMNGYCLPEPYFSSKVKGWVERLMKTL-RDPSLPLLELQDIMTSVSGRI 910
>GIDA_AZOSE (Q5P4J6) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 652 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Frame = +1 Query: 157 NAGLHLTVQNLRELP-------TEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 NA L LT + REL FC R ++ RLR W HP VP Sbjct: 443 NADLRLTEKG-RELGLVDDVRWAAFCEKRDAIERETARLRAAWAHPARVP 491
>Y301_METJA (Q57749) Hypothetical protein MJ0301| Length = 294 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 42 INIKTVPKDAAGHNLPFIQQHEYSF 116 I I T+ +D AG+N PF QH SF Sbjct: 11 IKIYTLAEDYAGYNSPFWSQHGLSF 35
>VTER_EBV (P03219) Probable DNA packaging protein| Length = 690 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 Query: 17 RHHGTRTKNKHQNSSKRRSGAQPAFHTTARIQFRLSP 127 RH+G R + S GA PA HT ++Q L P Sbjct: 68 RHYGPRPVFVASDESLPMFGASPALHTPVQVQMCLLP 104
>COA1_RAT (P11497) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2345 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +1 Query: 169 HLTVQNLRELPTEFCLPRPSVNTR----IYRLRRNWEHPPSVPLLLLSDKICSL*GAL 330 H + NL + +CLP P +++ + RL + PS+PLL L D + S+ G + Sbjct: 853 HYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTL-RDPSLPLLELQDIMTSVSGRI 909
>YRO6_CAEEL (Q09423) Hypothetical protein R07G3.6| Length = 304 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = +3 Query: 15 KGTTAHAPKINIKTVPKDAAGHNLPFIQQHEYSFGCPRHAFLLGNPVQRWVTPYSPKSQR 194 + T A APK +I TVP P Q+ E + F L NP+ + T SP Sbjct: 196 QATIAPAPKFDIFTVPPPP-----PLFQEWEKPILSLSNPFTL-NPLMKMFTTPSPPQTL 249 Query: 195 APYRVLP 215 AP +P Sbjct: 250 APLPKIP 256
>COA1_HUMAN (Q13085) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2346 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +1 Query: 169 HLTVQNLRELPTEFCLPRPSVNTR----IYRLRRNWEHPPSVPLLLLSDKICSL*GAL 330 H + NL + +CLP P +++ + RL + PS+PLL L D + S+ G + Sbjct: 854 HYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTL-RDPSLPLLELQDIMTSVSGRI 910
>TRMD_BACLD (Q65JP6) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 243 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = +2 Query: 227 QLIHAYIGSGETGSTLRPFPCFSSATKFAASREPSGSPRHISK*LQTLEIPQAKR 391 Q + Y G G L+P P F + K A E GSPR I L PQ +R Sbjct: 47 QTVDDYPYGGGAGMVLKPQPVFDAVEKLTA--EAGGSPRII------LVCPQGER 93
>HHEX_HUMAN (Q03014) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 270 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = +2 Query: 203 PSFAFHGLQLIHAYIGSGETGSTLRPFP-CFSSATKFAASREPSGSPRHISK*LQTLEIP 379 P+F+ H + A G G G L PFP + T +P G P S LQ P Sbjct: 77 PAFSHHSAAALAAAYGPGGFGGPLYPFPRTVNDYTHALLRHDPLGKPLLWSPFLQR---P 133 Query: 380 QAKRGG 397 KR G Sbjct: 134 LHKRKG 139
>RHLB_YERPS (Q66G19) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = +2 Query: 2 IPTPKRHHGTRTKN-KHQNSSKRRSGA 79 +P PKR TRT N +NS+ RRSGA Sbjct: 393 LPAPKRLARTRTGNGPRRNSAPRRSGA 419
>RHLB_YERPE (Q8ZAD8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = +2 Query: 2 IPTPKRHHGTRTKN-KHQNSSKRRSGA 79 +P PKR TRT N +NS+ RRSGA Sbjct: 393 LPAPKRLARTRTGNGPRRNSAPRRSGA 419
>SODE_SCHMA (P16026) Extracellular superoxide dismutase [Cu-Zn] precursor (EC| 1.15.1.1) (EC-SOD) Length = 184 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +3 Query: 66 DAAGHNLPFIQQHEYSFGCPRHAFLLGN 149 +A H PF Q+H G PRHA LGN Sbjct: 89 EAGPHFNPFNQRHGPRHGYPRHAGDLGN 116
>ERM_STRSA (P06573) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) Length = 245 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 172 LTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 +++Q L +LP E P+P VN+ + +L R H VP Sbjct: 149 VSIQQLLKLPAECFHPKPKVNSVLIKLTR---HTTDVP 183
>ERM_STRPN (P21236) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (ErmAM) Length = 245 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 172 LTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 +++Q L +LP E P+P VN+ + +L R H VP Sbjct: 149 VSIQQLLKLPAECFHPKPKVNSVLIKLTR---HTTDVP 183
>ERMB_ENTFA (P20173) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) Length = 245 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 172 LTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 +++Q L +LP E P+P VN+ + +L R H VP Sbjct: 149 VSIQQLLKLPAECFHPKPKVNSVLIKLTR---HTTDVP 183
>ERM1_ENTFA (P0A4D5) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) Length = 245 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 172 LTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 +++Q L +LP E P+P VN+ + +L R H VP Sbjct: 149 VSIQQLLKLPAECFHPKPKVNSVLIKLTR---HTTDVP 183
>ERM1_CLOPE (P0A4D6) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) Length = 245 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 172 LTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 +++Q L +LP E P+P VN+ + +L R H VP Sbjct: 149 VSIQQLLKLPAECFHPKPKVNSVLIKLTR---HTTDVP 183
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 152 CTTLGYTLQSKISESSLPSFAFHGLQLIH-AYIGSGETGSTLRP 280 C LG+ SKI +++LP A G +I A GSG+TG+ P Sbjct: 59 CQRLGWMKPSKIQQAALP-HALQGKDVIGLAETGSGKTGAFAIP 101
>YYI3_CAEEL (Q18775) Probable G-protein coupled receptor C52B11.3| Length = 517 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +1 Query: 172 LTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVPL 288 LT Q +++ T F P V T++ + + WE PP+ + Sbjct: 478 LTCQRQQKVKTAFKTPLSLVFTQLISVTQMWEQPPNTSI 516
>ALP14_SCHPO (O94534) Spindle pole body component alp14 (Altered polarity| protein 14) Length = 809 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +1 Query: 151 LYNAGLHLTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHP 273 L + L+ TVQNL+ + + P+P+ ++R+ R +EHP Sbjct: 603 LNSGALNETVQNLKNMELDDPAPQPAKHSRVDR----YEHP 639
>KSGA_VIBPA (Q87ST6) Dimethyladenosine transferase (EC 2.1.1.-)| (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) Length = 269 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = +1 Query: 106 NTVSAVPVMHSY*ETLYNAGLHLTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 N ++A P +Y A + V + E+P +P P V++ + RL E P Sbjct: 145 NRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPCPAK 204 Query: 286 LLLLSDKIC 312 L L D++C Sbjct: 205 DLRLLDRVC 213
>FIBP_ADE04 (P36844) Fiber protein (pIV)| Length = 426 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = +3 Query: 39 KINIKTVPKDAAGHNLPFIQQHEYSFGCPRHAFLLGNPVQRWVTPYSPKSQRAPYRVLP 215 K+ TV K A L F QQH + W+ Y+PK + PY+ LP Sbjct: 77 KLIANTVNKAIAP--LSFFQQHHFPL--------------TWIPLYTPKMENYPYKFLP 119
>PTK1_YEAST (P36002) Serine/threonine-protein kinase PTK1/STK1 (EC 2.7.11.1)| Length = 649 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = +2 Query: 41 NKHQNSSKRRSGAQPAFHTTARIQFRLS----PSCILTRKPCTTLGYTLQSKISESS 199 + H N K+++ P FH+T+ S P+ + T + + +T SK S SS Sbjct: 32 SSHGNKLKKKASLPPDFHSTSTNDSESSSPKLPNSLKTSRRANSFAHTTNSKRSLSS 88
>DDX25_HUMAN (Q9UHL0) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/83 (25%), Positives = 35/83 (42%) Frame = +2 Query: 23 HGTRTKNKHQNSSKRRSGAQPAFHTTARIQFRLSPSCILTRKPCTTLGYTLQSKISESSL 202 H + ++ H+ ++ + P + + RL + K +G+ SKI E +L Sbjct: 72 HQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELL---KGIYAMGFNRPSKIQEMAL 128 Query: 203 PSFAFHGLQLIHAYIGSGETGST 271 P H Q + A SG TG T Sbjct: 129 PMMLAHPPQNLIAQSQSG-TGKT 150
>PERL_HUMAN (P22079) Lactoperoxidase precursor (EC 1.11.1.7) (LPO) (Salivary| peroxidase) (SPO) Length = 712 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Frame = +3 Query: 138 LLGNPVQRWVTPYSPKSQRAPYRVLPSTAFS*YTHI*AQEKLGAPSVRSLASPQRQNLQP 317 LLG+ +Q+W+ PY S+ R+ F+ + G V S +N QP Sbjct: 433 LLGDHMQKWIPPYQGYSESVDPRISNVFTFA--------FRFGHLEVPSSMFRLDENYQP 484 Query: 318 LG--SPLVAHDI*VNSYRLWK 374 G L H + N++R+ K Sbjct: 485 WGPEPELPLHTLFFNTWRMVK 505
>ERMB_ECOLI (P10738) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (Erythromycin resistance protein) Length = 245 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 172 LTVQNLRELPTEFCLPRPSVNTRIYRLRRNWEHPPSVP 285 +++Q L +LP E P+P VN+ + +L R H VP Sbjct: 149 VSIQQLLKLPAECFHPKPRVNSVLIKLTR---HTTDVP 183
>LKHA4_SCHPO (O94544) Probable leukotriene A-4 hydrolase (EC 3.3.2.6) (LTA-4| hydrolase) (Leukotriene A(4) hydrolase) Length = 612 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Frame = +2 Query: 62 KRRSGAQPAFHTTARIQFRLSPSCIL-----TRKPCTTLGYTLQSKISESSLPSFAFHGL 226 KRR A H + S SCIL T K CT L + + P + F Sbjct: 79 KRRGFLGSALHIVPADEIPSSKSCILTILYSTTKDCTALQFLKPEQTIGGKFP-YVFSEC 137 Query: 227 QLIHA 241 Q IHA Sbjct: 138 QAIHA 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,313,751 Number of Sequences: 219361 Number of extensions: 1365518 Number of successful extensions: 3648 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3548 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3648 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
