>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence
          Length = 77136

 Score =  781 bits (394), Expect = 0.0
 Identities = 397/398 (99%)
 Strand = Plus / Minus

                                                                         
Query: 1     cattccgacacccaaaaggcaccacggcacacgcaccaaaaataaacatcaaaacagttc 60
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 58818 cattccgacacccaaaaggcaccacggcacacgcaccagaaataaacatcaaaacagttc 58759

                                                                         
Query: 61    caaaagacgcagcggggcacaacctgcctttcatacaacagcacgaatacagtttcggct 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58758 caaaagacgcagcggggcacaacctgcctttcatacaacagcacgaatacagtttcggct 58699

                                                                         
Query: 121   gtccccgtcatgcattcttactaggaaaccctgtacaacgctgggttacaccttacagtc 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58698 gtccccgtcatgcattcttactaggaaaccctgtacaacgctgggttacaccttacagtc 58639

                                                                         
Query: 181   caaaatctcagagagctccctaccgagttttgccttccacggccttcagttaatacacgc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58638 caaaatctcagagagctccctaccgagttttgccttccacggccttcagttaatacacgc 58579

                                                                         
Query: 241   atatataggctcaggagaaactgggagcaccctccgtccgttcccttgcttctcctcagc 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58578 atatataggctcaggagaaactgggagcaccctccgtccgttcccttgcttctcctcagc 58519

                                                                         
Query: 301   gacaaaatttgcagcctctagggagccctctggtagcccacgacatataagtaaatagct 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58518 gacaaaatttgcagcctctagggagccctctggtagcccacgacatataagtaaatagct 58459

                                                   
Query: 361   acagactctggaaataccacaagcaaaaagaggtggga 398
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 58458 acagactctggaaataccacaagcaaaaagaggtggga 58421

>emb|BX682545.5| Mouse DNA sequence from clone RP23-311B24 on chromosome 4, complete
              sequence
          Length = 217751

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 337    cccacgacatataagtaaatag 358
              ||||||||||||||||||||||
Sbjct: 172773 cccacgacatataagtaaatag 172752

>gb|AC067941.7| Homo sapiens BAC clone RP11-815K3 from 7, complete sequence
          Length = 215994

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 38    aaaaataaacatcaaaacagttccaaaag 66
             ||||||||||||| |||||||||||||||
Sbjct: 46093 aaaaataaacatc-aaacagttccaaaag 46066

>gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromosome 7, complete
            sequence
          Length = 219717

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                         
Query: 38   aaaaataaacatcaaaacagttccaaaag 66
            ||||||||||||| |||||||||||||||
Sbjct: 5146 aaaaataaacatc-aaacagttccaaaag 5173

>gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosome 15, complete sequence
          Length = 216481

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 42     ataaacatcaaaacagttccaaaa 65
              |||||||||||||||| |||||||
Sbjct: 155263 ataaacatcaaaacagctccaaaa 155286

>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   ctctagggagccctctggta 335
             ||||||||||||||||||||
Sbjct: 58759 ctctagggagccctctggta 58778

>gb|AY774547.1| Synthetic construct Francisella tularensis clone FLH152910.01X
           NT02FT1785 gene, complete cds
          Length = 1470

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 gctacagactctggaaatac 377
           ||||||||||||||||||||
Sbjct: 347 gctacagactctggaaatac 328

>gb|AE006092.1| Pasteurella multocida subsp. multocida str. Pm70 section 59 of 204 of
            the complete genome
          Length = 13170

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   gcaccaaaaataaacatcaa 52
            ||||||||||||||||||||
Sbjct: 2137 gcaccaaaaataaacatcaa 2118

>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence
          Length = 218875

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 42   ataaacatcaaaacagttccaaaa 65
            |||||||||||||||| |||||||
Sbjct: 1439 ataaacatcaaaacagctccaaaa 1462

>gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome 19, complete sequence
          Length = 202504

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 39     aaaataaacatcaaaacagttccaaaag 66
              |||||||| ||| |||||||||||||||
Sbjct: 143755 aaaataaaaatccaaacagttccaaaag 143728

>ref|XM_660717.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50327)
           partial mRNA
          Length = 303

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  atcaaaacagttccaaaaga 67
           ||||||||||||||||||||
Sbjct: 202 atcaaaacagttccaaaaga 221

>emb|Z95114.19|HS212A2 Human DNA sequence from clone CTA-212A2 on chromosome 22q12,
           complete sequence
          Length = 212753

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 ctggaaataccacaagcaaa 387
           ||||||||||||||||||||
Sbjct: 953 ctggaaataccacaagcaaa 934

>ref|XM_792835.1| PREDICTED: Strongylocentrotus purpuratus similar to coagulation
           factor V precursor (LOC593356), mRNA
          Length = 930

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 157 aacgctgggttacaccttacagtc 180
           |||||||||||||| |||||||||
Sbjct: 719 aacgctgggttacagcttacagtc 742

>emb|X02529.1|SAPC221 Staphylococcus aureus plasmid pC221 complete DNA sequence
          Length = 4557

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  aaaaataaacatcaaaacag 57
           ||||||||||||||||||||
Sbjct: 522 aaaaataaacatcaaaacag 503

>emb|X02166.1|SACP221 Staphylococcus plasmid pC221
          Length = 4555

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  aaaaataaacatcaaaacag 57
           ||||||||||||||||||||
Sbjct: 522 aaaaataaacatcaaaacag 503

>gb|AC138593.14| Mus musculus chromosome 8, clone RP24-280K15, complete sequence
          Length = 169176

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    cttactaggaaaccctgtac 156
              ||||||||||||||||||||
Sbjct: 159652 cttactaggaaaccctgtac 159633

>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence
          Length = 191684

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    ctggaaataccacaagcaaa 387
              ||||||||||||||||||||
Sbjct: 166775 ctggaaataccacaagcaaa 166794

>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aaaaataaacatcaaaacag 57
             ||||||||||||||||||||
Sbjct: 20334 aaaaataaacatcaaaacag 20353

>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 217249

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   catgcattcttactaggaaa 148
             ||||||||||||||||||||
Sbjct: 88005 catgcattcttactaggaaa 88024

>gb|AC154881.6| Mus musculus chromosome 15, clone RP24-259H19, complete sequence
          Length = 180231

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     tcaaaacagttccaaaagac 68
              ||||||||||||||||||||
Sbjct: 103648 tcaaaacagttccaaaagac 103629

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 38       aaaaataaacatcaaaacag 57
                ||||||||||||||||||||
Sbjct: 14196157 aaaaataaacatcaaaacag 14196138

>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aaaaataaacatcaaaacag 57
             ||||||||||||||||||||
Sbjct: 68230 aaaaataaacatcaaaacag 68211

>gb|AF222021.1|AF222021 Secale cereale E3900 repeat region and gag pseudogene, complete
            sequence
          Length = 3984

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 379  acaagcaaaaagaggtggga 398
            ||||||||||||||||||||
Sbjct: 1483 acaagcaaaaagaggtggga 1502

>gb|AC007052.4|AC007052 Homo sapiens chromosome 18, clone hRPK.411_H_24, complete sequence
          Length = 179726

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    aataccacaagcaaaaagag 392
              ||||||||||||||||||||
Sbjct: 126685 aataccacaagcaaaaagag 126666

>gb|AC099713.5| Mus musculus chromosome 15, clone RP23-447B6, complete sequence
          Length = 199130

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    aaaatctcagagagctccct 201
              ||||||||||||||||||||
Sbjct: 165350 aaaatctcagagagctccct 165331

>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 358     gctacagactctggaaatac 377
               ||||||||||||||||||||
Sbjct: 1714459 gctacagactctggaaatac 1714478

>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   gctacagactctggaaatac 377
             ||||||||||||||||||||
Sbjct: 80372 gctacagactctggaaatac 80353

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 38       aaaaataaacatcaaaacag 57
                ||||||||||||||||||||
Sbjct: 14204399 aaaaataaacatcaaaacag 14204380

>emb|AL840638.9| Zebrafish DNA sequence from clone DKEY-224J12, complete sequence
          Length = 177617

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   aaaaataaacatcaaaacag 57
            ||||||||||||||||||||
Sbjct: 7274 aaaaataaacatcaaaacag 7255

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    gttttgccttccacggcctt 226
              ||||||||||||||||||||
Sbjct: 379195 gttttgccttccacggcctt 379176

>emb|AL592225.17| Mouse DNA sequence from clone RP23-278M14 on chromosome 1, complete
              sequence
          Length = 183397

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aaaataaacatcaaaacagt 58
              ||||||||||||||||||||
Sbjct: 119383 aaaataaacatcaaaacagt 119364

>gb|AY871967.1| Synthetic construct hypothetical protein (FTT0077) gene, complete
           cds
          Length = 1575

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 gctacagactctggaaatac 377
           ||||||||||||||||||||
Sbjct: 425 gctacagactctggaaatac 406

>gb|AC168051.3| Mus musculus BAC clone RP23-169M5 from chromosome 8, complete sequence
          Length = 222981

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    cttactaggaaaccctgtac 156
              ||||||||||||||||||||
Sbjct: 157371 cttactaggaaaccctgtac 157390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,433,471
Number of Sequences: 3902068
Number of extensions: 3433471
Number of successful extensions: 64822
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 64702
Number of HSP's gapped (non-prelim): 120
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)