Clone Name | rbastl19a03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC160471.10| Mus musculus chromosome 7, clone RP23-432D9, complete sequence Length = 222272 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaaca 106 |||||||||||||||||||||| Sbjct: 152714 acgaaacgaaacgaaacaaaca 152735
>gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, complete sequence Length = 215165 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaaca 106 |||||||||||||||||||||| Sbjct: 189712 acgaaacgaaacgaaacaaaca 189733
>gb|AC113250.3| Drosophila melanogaster 3L BAC RP98-6P13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168299 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 cgaaacgaaacgaaacaaacag 107 |||||||||||||||||||||| Sbjct: 4529 cgaaacgaaacgaaacaaacag 4550
>gb|AC010695.5| Drosophila melanogaster 3L BAC RP98-20J4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160650 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 cgaaacgaaacgaaacaaacag 107 |||||||||||||||||||||| Sbjct: 118492 cgaaacgaaacgaaacaaacag 118513
>gb|AC119193.9| Mus musculus chromosome 7, clone RP24-178L6, complete sequence Length = 162310 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaaca 106 |||||||||||||||||||||| Sbjct: 119798 acgaaacgaaacgaaacaaaca 119777
>emb|BX649386.4| Zebrafish DNA sequence from clone RP71-18A24 in linkage group 4, complete sequence Length = 161671 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaaca 106 |||||||||||||||||||||| Sbjct: 81984 acgaaacgaaacgaaacaaaca 82005
>gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55 of 83 of the complete sequence Length = 279152 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 cgaaacgaaacgaaacaaacag 107 |||||||||||||||||||||| Sbjct: 277459 cgaaacgaaacgaaacaaacag 277480
>gb|AC110196.9| Mus musculus chromosome 15, clone RP24-343E7, complete sequence Length = 154367 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaaca 106 |||||||||||||||||||||| Sbjct: 142979 acgaaacgaaacgaaacaaaca 142958
>gb|AC167357.6| Mus musculus chromosome 7, clone RP23-388K14, complete sequence Length = 185128 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaaca 106 |||||||||||||||||||||| Sbjct: 14672 acgaaacgaaacgaaacaaaca 14651
>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence Length = 105004 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 aaatattagtcaacaatggtacaaa 291 |||||||||||||||||| |||||| Sbjct: 101295 aaatattagtcaacaatgttacaaa 101319
>emb|AL365189.15| Human DNA sequence from clone RP11-595C20 on chromosome 6, complete sequence Length = 97534 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 tcaaaattatagtacaatact 209 ||||||||||||||||||||| Sbjct: 39882 tcaaaattatagtacaatact 39902
>gb|AF395165.1| Periclistus brandti internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1638 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cacgaaacgaaacgaaacaaa 104 ||||||||||||||||||||| Sbjct: 212 cacgaaacgaaacgaaacaaa 232
>gb|DQ332659.1| Synthetic construct Saccharomyces cerevisiae clone FLH201517.01X EPT1 gene, complete sequence Length = 1267 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cgctggtatcgaagtatttct 129 ||||||||||||||||||||| Sbjct: 162 cgctggtatcgaagtatttct 182
>gb|M59311.1|YSCEPT1 S.cerevisiae sn-1,2-diacylglycerol ethanolamine phosphotransferase (EPT1) gene, complete cds Length = 2123 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cgctggtatcgaagtatttct 129 ||||||||||||||||||||| Sbjct: 721 cgctggtatcgaagtatttct 741
>gb|U10398.3|YSCH9315 Saccharomyces cerevisiae chromosome VIII cosmid 9315 Length = 30351 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cgctggtatcgaagtatttct 129 ||||||||||||||||||||| Sbjct: 1774 cgctggtatcgaagtatttct 1794
>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197962 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 83263 acgaaacgaaacgaaacaaa 83244
>gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosome 12, complete sequence Length = 202733 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 77686 acgaaacgaaacgaaacaaa 77705
>gb|AC121560.17| Mus musculus chromosome 16, clone RP24-398G11, complete sequence Length = 189161 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 26251 acgaaacgaaacgaaacaaa 26232
>gb|AC115844.7| Mus musculus chromosome 15, clone RP24-240I3, complete sequence Length = 164109 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 56706 acgaaacgaaacgaaacaaa 56687
>gb|AC115749.12| Mus musculus chromosome 3, clone RP23-14C17, complete sequence Length = 230988 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 74318 acgaaacgaaacgaaacaaa 74337
>gb|AC113323.12| Mus musculus chromosome 15, clone RP23-451O9, complete sequence Length = 175138 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 138451 acgaaacgaaacgaaacaaa 138432
>gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, complete sequence Length = 199109 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 acatatttatgttctctgat 80 |||||||||||||||||||| Sbjct: 181486 acatatttatgttctctgat 181505
>gb|AC099695.15| Mus musculus chromosome 10, clone RP23-234P12, complete sequence Length = 169161 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 119751 acgaaacgaaacgaaacaaa 119770
>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ctttctcaatattgtcttcc 438 |||||||||||||||||||| Sbjct: 12002 ctttctcaatattgtcttcc 11983
>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230186 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 66337 acgaaacgaaacgaaacaaa 66356
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ctttctcaatattgtcttcc 438 |||||||||||||||||||| Sbjct: 195772 ctttctcaatattgtcttcc 195753
>gb|AC140303.3| Mus musculus BAC clone RP23-381H21 from chromosome 3, complete sequence Length = 192020 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 23395 acgaaacgaaacgaaacaaa 23414
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 63593 acgaaacgaaacgaaacaaa 63574
>gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, complete sequence Length = 229563 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 15016 acgaaacgaaacgaaacaaa 15035
>gb|AC158616.8| Mus musculus 10 BAC RP23-227E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248127 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 183161 acgaaacgaaacgaaacaaa 183142
>gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome 14, complete sequence Length = 181842 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 31522 acgaaacgaaacgaaacaaa 31541
>gb|AC138108.3| Mus musculus BAC clone RP24-497M9 from chromosome 10, complete sequence Length = 135541 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 56131 acgaaacgaaacgaaacaaa 56150
>emb|Z68118.1|CER01E6 Caenorhabditis elegans Cosmid R01E6, complete sequence Length = 40937 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tgaaaaaagttcaatcaatt 24 |||||||||||||||||||| Sbjct: 40632 tgaaaaaagttcaatcaatt 40613
>gb|AC121973.2| Mus musculus BAC clone RP24-276I10 from chromosome 19, complete sequence Length = 170313 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 102356 acgaaacgaaacgaaacaaa 102375
>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3, complete sequence Length = 168285 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 84105 acgaaacgaaacgaaacaaa 84124
>gb|AC005017.1| Homo sapiens BAC clone GS1-214N13 from 7, complete sequence Length = 137176 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gtatttctagaactgtcaac 141 |||||||||||||||||||| Sbjct: 13806 gtatttctagaactgtcaac 13825
>emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 in linkage group 7, complete sequence Length = 190528 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 16151 acgaaacgaaacgaaacaaa 16132
>emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chromosome 20 Contains the 5' end of the BTBD4 gene for BTB (POZ) domain containing 4, part of a gene for a tissue plasminogen activator protein and two CpG islands, complete sequence Length = 41932 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cctttctgctcggtgtgttt 464 |||||||||||||||||||| Sbjct: 12460 cctttctgctcggtgtgttt 12441
>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence Length = 204891 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 12026 acgaaacgaaacgaaacaaa 12045
>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence Length = 203604 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 32141 acgaaacgaaacgaaacaaa 32160
>gb|AC158795.4| Mus musculus chromosome 3, clone RP23-261G9, complete sequence Length = 155916 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 40713 acgaaacgaaacgaaacaaa 40732
>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1 Contains the MGAT3 gene for mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, the gene for a predicted protein, the ATF4 gene for activating transcription factor 4 (tax-responsive enhancer element B67) and the 5' end of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit. Contains ESTs, STSs, GSSs and five putative CpG islands, complete sequence Length = 112460 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 8432 acgaaacgaaacgaaacaaa 8413
>emb|Z98977.4|SPAC23H4 S.pombe chromosome I cosmid c23H4 Length = 40387 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 27983 acgaaacgaaacgaaacaaa 28002
>gb|AC166247.3| Mus musculus BAC RP23-426E9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191393 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 408 acgaaacgaaacgaaacaaa 389
>emb|AL513411.1|NCG65A3 Neurospora crassa DNA linkage group V Cosmid contig G65A3 Length = 62544 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 1108 acgaaacgaaacgaaacaaa 1089
>gb|AC102128.18| Mus musculus chromosome 3, clone RP23-205G9, complete sequence Length = 192509 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 18931 acgaaacgaaacgaaacaaa 18912
>gb|AC010108.6| Drosophila melanogaster 3L BAC RP98-23K9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167187 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 52487 acgaaacgaaacgaaacaaa 52468
>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18, complete sequence Length = 164758 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tgtttcaggctctctttctc 425 |||||||||||||||||||| Sbjct: 128434 tgtttcaggctctctttctc 128415
>gb|AC091226.3| Drosophila melanogaster 3L BAC RP98-3I13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165518 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 113932 acgaaacgaaacgaaacaaa 113951
>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence Length = 68440 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 tatgtttcaggctctctttc 423 |||||||||||||||||||| Sbjct: 64829 tatgtttcaggctctctttc 64810
>ref|NM_168454.1| Drosophila melanogaster CG32083-RA (CG32083), mRNA Length = 662 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 73 acgaaacgaaacgaaacaaa 92
>gb|AY526079.1| Mus musculus neural retina leucine zipper (Nrl) gene, promoter region and 5' UTR Length = 2420 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 120 acgaaacgaaacgaaacaaa 139
>gb|AC099011.1| Drosophila melanogaster, chromosome 2L, region 24C-24D, BAC clone BACR22M14, complete sequence Length = 173380 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cccacgaaacgaaacgaaac 101 |||||||||||||||||||| Sbjct: 172270 cccacgaaacgaaacgaaac 172289
>emb|CR478112.2| Mouse DNA sequence from clone WI1-2389C6 on chromosome X, complete sequence Length = 30869 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 4780 acgaaacgaaacgaaacaaa 4799
>gb|AC153932.10| Mus musculus 10 BAC RP24-266J23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 97434 acgaaacgaaacgaaacaaa 97453
>gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosome 16, complete sequence Length = 174321 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 66163 acgaaacgaaacgaaacaaa 66144
>gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosome 8, complete sequence Length = 150334 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 79161 acgaaacgaaacgaaacaaa 79142
>dbj|AK004352.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110062M06 product:unclassifiable, full insert sequence Length = 470 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 354 acgaaacgaaacgaaacaaa 335
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 1068862 acgaaacgaaacgaaacaaa 1068881
>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR48D02, complete sequence Length = 181728 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cccacgaaacgaaacgaaac 101 |||||||||||||||||||| Sbjct: 86924 cccacgaaacgaaacgaaac 86943
>gb|AC158653.7| Mus musculus 6 BAC RP23-418F10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185818 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 108550 acgaaacgaaacgaaacaaa 108531
>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence Length = 204294 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tacaaaatattagtcaacaa 282 |||||||||||||||||||| Sbjct: 131842 tacaaaatattagtcaacaa 131823
>gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121995 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 46939 acgaaacgaaacgaaacaaa 46920
>gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163031 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 101803 acgaaacgaaacgaaacaaa 101822
>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence Length = 198167 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 tatgtttcaggctctctttc 423 |||||||||||||||||||| Sbjct: 2684 tatgtttcaggctctctttc 2665
>gb|AC135999.4| Homo sapiens chromosome 15, clone RP13-911E13, complete sequence Length = 101277 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tatgttctctgatgcccacg 87 |||||||||||||||||||| Sbjct: 36347 tatgttctctgatgcccacg 36328
>emb|BX247882.6| Zebrafish DNA sequence from clone CH211-224P3 in linkage group 14, complete sequence Length = 196155 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 41264 acgaaacgaaacgaaacaaa 41245
>emb|AL929128.4| Zebrafish DNA sequence from clone CH211-203P17 in linkage group 17, complete sequence Length = 100859 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 77545 acgaaacgaaacgaaacaaa 77526
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 97389 acgaaacgaaacgaaacaaa 97408
>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18, complete sequence Length = 145250 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tgtttcaggctctctttctc 425 |||||||||||||||||||| Sbjct: 91226 tgtttcaggctctctttctc 91207
>gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, complete sequence Length = 208233 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 79186 acgaaacgaaacgaaacaaa 79205
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 acaaaatattagtcaacaat 283 |||||||||||||||||||| Sbjct: 2555987 acaaaatattagtcaacaat 2555968
>emb|CT025698.13| Mouse DNA sequence from clone RP24-223P14 on chromosome 9, complete sequence Length = 193973 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 acatatttatgttctctgat 80 |||||||||||||||||||| Sbjct: 157054 acatatttatgttctctgat 157035
>gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, region 24D3-24D5, P1 clone DS04766, complete sequence Length = 64879 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cccacgaaacgaaacgaaac 101 |||||||||||||||||||| Sbjct: 35388 cccacgaaacgaaacgaaac 35407
>emb|CR942772.2| Xenopus tropicalis finished cDNA, clone TEgg036g05 Length = 3867 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cagtagtacatatttatgtt 73 |||||||||||||||||||| Sbjct: 2510 cagtagtacatatttatgtt 2529
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cccacgaaacgaaacgaaac 101 |||||||||||||||||||| Sbjct: 7684 cccacgaaacgaaacgaaac 7703
>gb|AE003545.3| Drosophila melanogaster chromosome 3L, section 40 of 83 of the complete sequence Length = 282115 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 111086 acgaaacgaaacgaaacaaa 111067
>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete sequence Length = 282116 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 177755 acgaaacgaaacgaaacaaa 177774
>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence Length = 208140 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 72943 acgaaacgaaacgaaacaaa 72962
>gb|AC102506.9| Mus musculus chromosome 1, clone RP24-139E15, complete sequence Length = 151816 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 115825 acgaaacgaaacgaaacaaa 115844
>gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome 14, complete sequence Length = 224638 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 134649 acgaaacgaaacgaaacaaa 134668
>emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in linkage group 8, complete sequence Length = 186836 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 15588 acgaaacgaaacgaaacaaa 15607
>gb|AC117767.13| Mus musculus chromosome 1, clone RP24-507O16, complete sequence Length = 192892 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 83544 acgaaacgaaacgaaacaaa 83525
>gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complete sequence Length = 175729 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 162443 acgaaacgaaacgaaacaaa 162462
>gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, complete sequence Length = 184181 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 24532 acgaaacgaaacgaaacaaa 24551
>emb|AL807784.11| Mouse DNA sequence from clone RP23-448C18 on chromosome X, complete sequence Length = 127196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 36807 acgaaacgaaacgaaacaaa 36788
>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete sequence Length = 228428 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 118895 acgaaacgaaacgaaacaaa 118914
>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete sequence Length = 212360 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 5070 acgaaacgaaacgaaacaaa 5089
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 aaatattagtcaacaatggt 286 |||||||||||||||||||| Sbjct: 59691 aaatattagtcaacaatggt 59710
>emb|AL731705.11| Mouse DNA sequence from clone RP23-72M11 on chromosome X, complete sequence Length = 119774 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acgaaacgaaacgaaacaaa 104 |||||||||||||||||||| Sbjct: 68054 acgaaacgaaacgaaacaaa 68035 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,579,805 Number of Sequences: 3902068 Number of extensions: 4579805 Number of successful extensions: 77277 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76854 Number of HSP's gapped (non-prelim): 423 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)