Clone Name | rbastl19a01 |
---|---|
Clone Library Name | barley_pub |
>PPK_BACHD (Q9KD27) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 705 Score = 30.4 bits (67), Expect = 1.0 Identities = 16/70 (22%), Positives = 32/70 (45%) Frame = +1 Query: 19 IPSIHPYKIRQFTPFPVHERSQRDPLQPTRSEIRMGRKRRRILHGFFTGTNATDSLSFLV 198 + S+ P++I + P+HE RD L+ E++ + + G + L L+ Sbjct: 232 VKSVSPFRITRNADLPIHEEGARDLLREIEKELKKRKWGAAVRLEMQEGLMDPNVLKLLL 291 Query: 199 NLRHIFKQNV 228 ++ I K +V Sbjct: 292 DVLEIHKNDV 301
>SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 163 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +3 Query: 39 QDQAIHTISSP*TVTERSITTYQV-RDKNGEEEKENTTWLFYRDERHRFIVF 191 QD + I + +T S+ T + RDKN E KE T W HR I+F Sbjct: 17 QDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTEW-------HRVILF 61
>STAP2_MOUSE (Q8R0L1) Signal-transducing adaptor protein 2 (STAP-2)| Length = 411 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +2 Query: 317 GGLQGGGSDLLRVVGDGLAELEEQLRVRRA 406 GG S L+ +GD AELEE+L+ RRA Sbjct: 379 GGSSSQASSLVTRLGDITAELEEKLQKRRA 408
>LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3) (Pancreatic| lipase) (PL) Length = 450 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 88 DPLQPTRSEIRMGRKRRRILHGF 156 DP T S RM RK R I+HGF Sbjct: 56 DPSTITNSNFRMDRKTRFIIHGF 78
>SSB_BRAJA (Q89L50) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 27.3 bits (59), Expect = 8.8 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 78 VTERSITTYQV-RDKNGEEEKENTTWLFYRDERHRFIVFS 194 + SI T + RDKN E KE T W HR ++F+ Sbjct: 29 IANLSIATSETWRDKNSGERKEKTEW-------HRVVIFN 61
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 27.3 bits (59), Expect = 8.8 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -3 Query: 101 GCNGSLCDRSWTGNGVNCL 45 G +C R WTGNG +C+ Sbjct: 899 GTYSCVCQRGWTGNGRDCV 917 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,398,093 Number of Sequences: 219361 Number of extensions: 781986 Number of successful extensions: 2128 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2079 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2128 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)