Clone Name | rbastl18h12 |
---|---|
Clone Library Name | barley_pub |
>CERK1_HUMAN (Q8TCT0) Ceramide kinase (EC 2.7.1.138) (Acylsphingosine kinase)| (hCERK) (Lipid kinase 4) (LK4) Length = 537 Score = 28.1 bits (61), Expect = 5.6 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 14/72 (19%) Frame = +1 Query: 64 MMGTSTETDIEGAGHNELAMKQ--------------KSSQVNRWSFYPKNDHCGLKEKQL 201 ++G S D+ HN ++ K S+ RW + D GLK Sbjct: 262 VVGDSLAMDVSSVHHNSTLLRYSVSLLGYGFYGDIIKDSEKKRWLGLARYDFSGLKTFLS 321 Query: 202 QVCSSGTTALLP 237 C GT + LP Sbjct: 322 HHCYEGTVSFLP 333
>NAS38_CAEEL (Q20942) Zinc metalloproteinase nas-38 precursor (EC 3.4.24.21)| (Nematode astacin 38) Length = 745 Score = 27.7 bits (60), Expect = 7.4 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Frame = +2 Query: 29 QRANTTTVQSST*WGQA-QRRT*KVRGTMSSQ*SKRALRSTAGVSTLRMTTVALRRNSSR 205 Q+ TTVQS+T + A RRT K + + T+ +T TTV+ S+ Sbjct: 513 QKPEPTTVQSTTTYTTAIPRRTAKKQFFTRKPITIPLTPLTSSSTTTESTTVSSTTQSTT 572 Query: 206 YAPQEPQHYC-QTCSDPTSPTLVL 274 + P EP +T SPT+ L Sbjct: 573 WLPTEPSFATGETEITTASPTITL 596
>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)| Length = 2341 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 143 STAGVSTLRMTTVALRRNSSRYAPQEPQHYCQTCSDPTSPTLVL*SPAAQQ 295 + +G + V+ RR S + Q + S+PT PTL++ SP + Q Sbjct: 767 AVSGAAQASEEAVSFRRERSTFRRQAVRRRHNAGSNPTPPTLLIGSPLSLQ 817
>PGH1_RAT (Q63921) Prostaglandin G/H synthase 1 precursor (EC 1.14.99.1)| (Cyclooxygenase-1) (COX-1) (Prostaglandin-endoperoxide synthase 1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1) Length = 602 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 239 SGNNAVVPEEHTWSCFSLRPQWSF 168 SG N +PE TW SLRP SF Sbjct: 67 SGPNCTIPEIWTWLRSSLRPSPSF 90
>T2K1_KLEPN (P25237) Type II restriction enzyme KpnI (EC 3.1.21.4)| (Endonuclease KpnI) (R.KpnI) Length = 218 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = +1 Query: 175 HCGLKEKQLQVCSSGTTALLPDMF*SYITDPGS 273 HCGL E + GT L PD + DP + Sbjct: 127 HCGLVEGDIDPIGGGTVKLTPDHMTPHSIDPAT 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,386,119 Number of Sequences: 219361 Number of extensions: 880296 Number of successful extensions: 2431 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2430 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)