>VAL2_PYMVV (P27261) AL2 protein|
          Length = 129

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 142 HDDSGEQQPHPCSPQTRRAVSRPFSTPTDPNL 237
           H D   Q+P+P  PQ + ++  P S P  P+L
Sbjct: 85  HQDQDIQRPNPVQPQPQESIGSPQSIPELPSL 116

>GLCD_ECOLI (P0AEP9) Glycolate oxidase subunit glcD|
          Length = 499

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -1

Query: 254 EFARTARLGSVGVEKGLDTARLVCGEHG*GCCSPESSCAMASGLEEDMFIFHSLKDA 84
           EFAR   LG   +E  ++    + GEHG G       CA  +   +++  FH++K A
Sbjct: 405 EFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFN--SDEITTFHAVKAA 459

>GLCD_ECOL6 (P0AEQ0) Glycolate oxidase subunit glcD|
          Length = 499

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -1

Query: 254 EFARTARLGSVGVEKGLDTARLVCGEHG*GCCSPESSCAMASGLEEDMFIFHSLKDA 84
           EFAR   LG   +E  ++    + GEHG G       CA  +   +++  FH++K A
Sbjct: 405 EFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFN--SDEITTFHAVKAA 459

>TLE1_BRARE (O13168) Groucho 1 protein (Fragment)|
          Length = 535

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 86  HPSMSEK*TCPLPIQKPLHMMTQVSNSLIRALRKPDERYLDPFPHLQILILPS 244
           HP M+   T P  +   LH+  Q+S +   A  +      DP PH++  +LP+
Sbjct: 148 HPEMNGSLTSP-GVYAGLHISPQMSAAAAAAYGRTSMPGFDPHPHMRAPVLPA 199

>TRAC_ECOLI (P18004) Protein traC|
          Length = 875

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 125 IQKPLHMMTQVSNSLIRALRKPDE 196
           +  PL  +TQ  NSL+ AL+ PDE
Sbjct: 1   MNNPLEAVTQAVNSLVTALKLPDE 24

>DBP9_CANAL (Q5A4P9) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)|
          Length = 574

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = -1

Query: 308 VVFQTESCMYVFSL-----AYIHEFARTARLGSVGV 216
           V F+  +C+  F L     AYIH   RTAR G  G+
Sbjct: 369 VDFRNVACVLNFDLPTSSKAYIHRIGRTARAGKAGM 404

>VTS1_ASPFU (Q4WJS2) Protein vts1|
          Length = 602

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 178 SPQTRRAVSRPFSTPTDPNL 237
           SP+ RR  S+P   PTDPNL
Sbjct: 523 SPRGRRGSSKPPEDPTDPNL 542

>DBP9_ASHGO (Q74ZC1) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)|
          Length = 595

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
 Frame = -1

Query: 308 VVFQTESCMYVFSL-----AYIHEFARTARLGSVG 219
           V FQ  SC+  F L     +Y+H   RTAR G  G
Sbjct: 390 VDFQNVSCVLNFDLPTTAKSYVHRIGRTARAGKSG 424

>VTS1_EMENI (Q5BGC4) Protein vts1|
          Length = 611

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 178 SPQTRRAVSRPFSTPTDPNL 237
           SP+ RR  S+P   PTDPNL
Sbjct: 521 SPRGRRGSSKPPEDPTDPNL 540


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,265,989
Number of Sequences: 219361
Number of extensions: 1150095
Number of successful extensions: 3289
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3289
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)