ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl18h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
2dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AK103045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
4emb|AL390206.14| Human DNA sequence from clone RP11-478K7 on chr... 44 0.36
5ref|XM_711011.1| Candida albicans SC5314 hypothetical protein (C... 42 1.4
6gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosom... 42 1.4
7gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, compl... 42 1.4
8gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, com... 42 1.4
9gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, co... 42 1.4
10gb|AC016643.6|AC016643 Homo sapiens chromosome 5 clone RP11-480H... 42 1.4
11gb|AC079468.3|AC079468 Homo sapiens chromosome 5 clone RP11-403A... 42 1.4
12gb|AC005858.1| Homo sapiens 12q24.2 PAC RPCI3-446N13 (Roswell Pa... 42 1.4
13gb|AC134437.3| Mus musculus BAC clone RP24-450H12 from chromosom... 42 1.4
14gb|AC165088.5| Mus musculus BAC clone RP23-147K12 from chromosom... 40 5.6
15gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, com... 40 5.6
16gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
17gb|AC102499.10| Mus musculus chromosome 1, clone RP24-151M13, co... 40 5.6
18gb|AC166156.4| Mus musculus BAC clone RP24-274H19 from chromosom... 40 5.6
19gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, comp... 40 5.6
20gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete... 40 5.6
21gb|AC108827.10| Mus musculus chromosome 7, clone RP23-147O14, co... 40 5.6
22gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosom... 40 5.6
23emb|CR388005.16| Zebrafish DNA sequence from clone DKEY-162B23 i... 40 5.6
24gb|AC124366.4| Mus musculus BAC clone RP24-541E9 from chromosome... 40 5.6
25gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, comp... 40 5.6
26emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in ... 40 5.6
27emb|BX324111.12| Zebrafish DNA sequence from clone CH211-119C17 ... 40 5.6
28ref|XM_787800.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 5.6
29emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 5.6
30gb|AY118663.1| Drosophila melanogaster SD10416 full insert cDNA 40 5.6
31gb|AC012322.8| Homo sapiens chromosome 16 clone RP11-562N11, com... 40 5.6
32ref|NM_169486.1| Drosophila melanogaster CG7381-RC, transcript v... 40 5.6
33ref|NM_169485.1| Drosophila melanogaster CG7381-RB, transcript v... 40 5.6
34ref|NM_141985.1| Drosophila melanogaster CG7381-RA, transcript v... 40 5.6
35gb|AC108160.4| Homo sapiens BAC clone RP11-610M23 from 4, comple... 40 5.6
36gb|AC012495.9| Homo sapiens BAC clone RP11-327F6 from 2, complet... 40 5.6
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
38gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, R... 40 5.6
39gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, co... 40 5.6
40dbj|AP007208.1| Mus musculus molossinus genomic DNA, chromosome ... 40 5.6
41emb|CR790366.19| Zebrafish DNA sequence from clone DKEY-245M3 in... 40 5.6
42emb|CR974475.12| Zebrafish DNA sequence from clone CH73-27E22 in... 40 5.6
43gb|AE003698.3| Drosophila melanogaster chromosome 3R, section 36... 40 5.6
44emb|AL135858.3|CNS01DVJ Human chromosome 14 DNA sequence BAC R-6... 40 5.6
45gb|AC090227.10| Homo sapiens chromosome 18, clone RP11-813F20, c... 40 5.6
46gb|BT001542.1| Drosophila melanogaster RE10019 full insert cDNA 40 5.6
47gb|BT001537.1| Drosophila melanogaster RE08405 full insert cDNA 40 5.6
48emb|BX294194.10| Mouse DNA sequence from clone RP23-342D10 on ch... 40 5.6
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
50gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, compl... 40 5.6
51emb|AL805919.10| Mouse DNA sequence from clone RP23-395M3 on chr... 40 5.6
52emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on ch... 40 5.6
53emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chro... 40 5.6 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 311      attttctgtaacttctgacagtttgtgcgtcacggtcactgtgactttcagctgttgcca 370
                ||||||||||||||||||| ||  ||||||||| ||  |||||||||||| || ||||||
Sbjct: 22468226 attttctgtaacttctgacggtccgtgcgtcactgttgctgtgactttcacctcttgcca 22468167

                   
Query: 371      gaa 373
                |||
Sbjct: 22468166 gaa 22468164
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>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0672C09
          Length = 145655

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 311   attttctgtaacttctgacagtttgtgcgtcacggtcactgtgactttcagctgttgcca 370
             ||||||||||||||||||| ||  ||||||||| ||  |||||||||||| || ||||||
Sbjct: 92364 attttctgtaacttctgacggtccgtgcgtcactgttgctgtgactttcacctcttgcca 92305

                
Query: 371   gaa 373
             |||
Sbjct: 92304 gaa 92302
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>dbj|AK103045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117F22, full
            insert sequence
          Length = 3186

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 311  attttctgtaacttctgacagtttgtgcgtcacggtcactgtgactttcagctgttgcca 370
            ||||||||||||||||||| ||  ||||||||| ||  |||||||||||| || ||||||
Sbjct: 2730 attttctgtaacttctgacggtccgtgcgtcactgttgctgtgactttcacctcttgcca 2671

               
Query: 371  gaa 373
            |||
Sbjct: 2670 gaa 2668
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>emb|AL390206.14| Human DNA sequence from clone RP11-478K7 on chromosome 10 Contains a
             small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
             (SNRPD2) pseudogene and a novel gene (FLJ35900), complete
             sequence
          Length = 113039

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 81    ttttgcatccttcaatgagtgaaaaatgaa 110
             ||||||||| || |||||||||||||||||
Sbjct: 44559 ttttgcatcattaaatgagtgaaaaatgaa 44530
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>ref|XM_711011.1| Candida albicans SC5314 hypothetical protein (CaO19_7443), mRNA
          Length = 768

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 aaactaaatacatacatacat 288
           |||||||||||||||||||||
Sbjct: 29  aaactaaatacatacatacat 9
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>gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosome 19, complete
            sequence
          Length = 182582

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  aaactaaatacatacatacat 288
            |||||||||||||||||||||
Sbjct: 8324 aaactaaatacatacatacat 8304
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>gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, complete sequence
          Length = 247161

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   taaatacatacatacatgatt 292
             |||||||||||||||||||||
Sbjct: 34339 taaatacatacatacatgatt 34359
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>gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, complete sequence
          Length = 214196

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   taaatacatacatacatgatt 292
             |||||||||||||||||||||
Sbjct: 92823 taaatacatacatacatgatt 92843
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>gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, complete sequence
          Length = 170801

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 203   ctagacccttttccacacctacaga 227
             ||||||||||||||| |||||||||
Sbjct: 81570 ctagacccttttccagacctacaga 81546
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>gb|AC016643.6|AC016643 Homo sapiens chromosome 5 clone RP11-480H11, complete sequence
          Length = 179969

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    atacatacatacatgattcag 295
              |||||||||||||||||||||
Sbjct: 109698 atacatacatacatgattcag 109718
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>gb|AC079468.3|AC079468 Homo sapiens chromosome 5 clone RP11-403A7, complete sequence
          Length = 167656

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 275   atacatacatacatgattcag 295
             |||||||||||||||||||||
Sbjct: 65260 atacatacatacatgattcag 65240
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>gb|AC005858.1| Homo sapiens 12q24.2 PAC RPCI3-446N13 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 135521

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    ttcaatgagtgaaaaatgaac 111
             |||||||||||||||||||||
Sbjct: 88729 ttcaatgagtgaaaaatgaac 88709
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>gb|AC134437.3| Mus musculus BAC clone RP24-450H12 from chromosome 19, complete sequence
          Length = 171749

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    aaactaaatacatacatacat 288
              |||||||||||||||||||||
Sbjct: 111819 aaactaaatacatacatacat 111799
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>gb|AC165088.5| Mus musculus BAC clone RP23-147K12 from chromosome 5, complete sequence
          Length = 220877

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   aactaaatacatacatacat 288
             ||||||||||||||||||||
Sbjct: 98666 aactaaatacatacatacat 98685
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>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence
          Length = 182519

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    aactaaatacatacatacat 288
              ||||||||||||||||||||
Sbjct: 111879 aactaaatacatacatacat 111860
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>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0077O14, complete sequence
          Length = 124915

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   aaactaaatacatacataca 287
             ||||||||||||||||||||
Sbjct: 44845 aaactaaatacatacataca 44826
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>gb|AC102499.10| Mus musculus chromosome 1, clone RP24-151M13, complete sequence
          Length = 184760

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  atacatacatacatgattca 294
            ||||||||||||||||||||
Sbjct: 5479 atacatacatacatgattca 5460
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>gb|AC166156.4| Mus musculus BAC clone RP24-274H19 from chromosome 3, complete sequence
          Length = 176294

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   aactaaatacatacatacat 288
             ||||||||||||||||||||
Sbjct: 61063 aactaaatacatacatacat 61044
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>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence
          Length = 256158

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   aatacatacatacatgattc 293
             ||||||||||||||||||||
Sbjct: 56434 aatacatacatacatgattc 56415
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>gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete sequence
          Length = 198037

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    ctcatccgtgctctccgcaa 186
              ||||||||||||||||||||
Sbjct: 133184 ctcatccgtgctctccgcaa 133203
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>gb|AC108827.10| Mus musculus chromosome 7, clone RP23-147O14, complete sequence
          Length = 220823

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   aactaaatacatacatacat 288
             ||||||||||||||||||||
Sbjct: 98666 aactaaatacatacatacat 98685
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>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence
          Length = 230133

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    aactaaatacatacatacat 288
              ||||||||||||||||||||
Sbjct: 145125 aactaaatacatacatacat 145106
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>emb|CR388005.16| Zebrafish DNA sequence from clone DKEY-162B23 in linkage group 1,
             complete sequence
          Length = 197480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   aactaaatacatacatacat 288
             ||||||||||||||||||||
Sbjct: 31716 aactaaatacatacatacat 31735
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>gb|AC124366.4| Mus musculus BAC clone RP24-541E9 from chromosome 1, complete sequence
          Length = 166555

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   atacatacatacatgattca 294
             ||||||||||||||||||||
Sbjct: 21438 atacatacatacatgattca 21457
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>gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, complete cds
          Length = 355200

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    aaactaaatacatacataca 287
              ||||||||||||||||||||
Sbjct: 337125 aaactaaatacatacataca 337106
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>emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in linkage group 11, complete
              sequence
          Length = 175925

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tgttttcactacttagaatt 37
              ||||||||||||||||||||
Sbjct: 102906 tgttttcactacttagaatt 102925
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>emb|BX324111.12| Zebrafish DNA sequence from clone CH211-119C17 in linkage group 14,
              complete sequence
          Length = 163871

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    atacatacatgattcagtct 298
              ||||||||||||||||||||
Sbjct: 128650 atacatacatgattcagtct 128631
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>ref|XM_787800.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC588099 (LOC588099), partial mRNA
          Length = 854

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 cacctacagatcctaatctt 237
           ||||||||||||||||||||
Sbjct: 313 cacctacagatcctaatctt 294
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 272     taaatacatacatacatgat 291
               ||||||||||||||||||||
Sbjct: 1470874 taaatacatacatacatgat 1470893
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>gb|AY118663.1| Drosophila melanogaster SD10416 full insert cDNA
          Length = 3109

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  ctcatccgtgctctccgcaa 186
            ||||||||||||||||||||
Sbjct: 1801 ctcatccgtgctctccgcaa 1782
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>gb|AC012322.8| Homo sapiens chromosome 16 clone RP11-562N11, complete sequence
          Length = 186151

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   atacatgattcagtctgaaa 302
             ||||||||||||||||||||
Sbjct: 72905 atacatgattcagtctgaaa 72886
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>ref|NM_169486.1| Drosophila melanogaster CG7381-RC, transcript variant C (CG7381),
            mRNA
          Length = 2797

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  ctcatccgtgctctccgcaa 186
            ||||||||||||||||||||
Sbjct: 1503 ctcatccgtgctctccgcaa 1484
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>ref|NM_169485.1| Drosophila melanogaster CG7381-RB, transcript variant B (CG7381),
            mRNA
          Length = 2924

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  ctcatccgtgctctccgcaa 186
            ||||||||||||||||||||
Sbjct: 1630 ctcatccgtgctctccgcaa 1611
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>ref|NM_141985.1| Drosophila melanogaster CG7381-RA, transcript variant A (CG7381),
            mRNA
          Length = 2612

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  ctcatccgtgctctccgcaa 186
            ||||||||||||||||||||
Sbjct: 1318 ctcatccgtgctctccgcaa 1299
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>gb|AC108160.4| Homo sapiens BAC clone RP11-610M23 from 4, complete sequence
          Length = 39993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    ttcaatgagtgaaaaatgaa 110
             ||||||||||||||||||||
Sbjct: 36237 ttcaatgagtgaaaaatgaa 36218
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>gb|AC012495.9| Homo sapiens BAC clone RP11-327F6 from 2, complete sequence
          Length = 215359

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    aactaaatacatacatacat 288
              ||||||||||||||||||||
Sbjct: 111058 aactaaatacatacatacat 111039
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 268      aaactaaatacatacataca 287
                ||||||||||||||||||||
Sbjct: 10670987 aaactaaatacatacataca 10671006
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>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete
              sequence
          Length = 229553

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    atacatacatacatgattca 294
              ||||||||||||||||||||
Sbjct: 150736 atacatacatacatgattca 150755



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    atacatacatacatgattca 294
              ||||||||||||||||||||
Sbjct: 134608 atacatacatacatgattca 134627



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    atacatacatacatgattca 294
              ||||||||||||||||||||
Sbjct: 128098 atacatacatacatgattca 128117



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    atacatacatacatgattca 294
              ||||||||||||||||||||
Sbjct: 112461 atacatacatacatgattca 112480
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>gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, complete sequence
          Length = 163503

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  aatacatacatacatgattc 293
            ||||||||||||||||||||
Sbjct: 8712 aatacatacatacatgattc 8731
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>dbj|AP007208.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-275M02,
             complete sequence
          Length = 165943

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   atacatacatacatgattca 294
             ||||||||||||||||||||
Sbjct: 19369 atacatacatacatgattca 19350
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>emb|CR790366.19| Zebrafish DNA sequence from clone DKEY-245M3 in linkage group 5,
             complete sequence
          Length = 151327

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   aactaaatacatacatacat 288
             ||||||||||||||||||||
Sbjct: 97385 aactaaatacatacatacat 97404
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>emb|CR974475.12| Zebrafish DNA sequence from clone CH73-27E22 in linkage group 22,
             complete sequence
          Length = 126320

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   taaatacatacatacatgat 291
             ||||||||||||||||||||
Sbjct: 25760 taaatacatacatacatgat 25779
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>gb|AE003698.3| Drosophila melanogaster chromosome 3R, section 36 of 118 of the
             complete sequence
          Length = 247955

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ctcatccgtgctctccgcaa 186
             ||||||||||||||||||||
Sbjct: 53298 ctcatccgtgctctccgcaa 53317
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>emb|AL135858.3|CNS01DVJ Human chromosome 14 DNA sequence BAC R-667E4 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164628

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   aaactaaatacatacataca 287
             ||||||||||||||||||||
Sbjct: 60216 aaactaaatacatacataca 60197
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>gb|AC090227.10| Homo sapiens chromosome 18, clone RP11-813F20, complete sequence
          Length = 224366

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ttcactacttagaattaaga 41
             ||||||||||||||||||||
Sbjct: 89934 ttcactacttagaattaaga 89953
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>gb|BT001542.1| Drosophila melanogaster RE10019 full insert cDNA
          Length = 2597

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  ctcatccgtgctctccgcaa 186
            ||||||||||||||||||||
Sbjct: 1318 ctcatccgtgctctccgcaa 1299
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>gb|BT001537.1| Drosophila melanogaster RE08405 full insert cDNA
          Length = 2928

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  ctcatccgtgctctccgcaa 186
            ||||||||||||||||||||
Sbjct: 1626 ctcatccgtgctctccgcaa 1607
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>emb|BX294194.10| Mouse DNA sequence from clone RP23-342D10 on chromosome X, complete
             sequence
          Length = 142001

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   aactaaatacatacatacat 288
             ||||||||||||||||||||
Sbjct: 49741 aactaaatacatacatacat 49760
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 268      aaactaaatacatacataca 287
                ||||||||||||||||||||
Sbjct: 10742531 aaactaaatacatacataca 10742550
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>gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, complete sequence
          Length = 183998

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   taaatacatacatacatgat 291
             ||||||||||||||||||||
Sbjct: 87222 taaatacatacatacatgat 87203
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>emb|AL805919.10| Mouse DNA sequence from clone RP23-395M3 on chromosome 4, complete
              sequence
          Length = 199130

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    atacatacatacatgattca 294
              ||||||||||||||||||||
Sbjct: 151360 atacatacatacatgattca 151341
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>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete
              sequence
          Length = 148047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    atacatacatacatgattca 294
              ||||||||||||||||||||
Sbjct: 119304 atacatacatacatgattca 119285



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    atacatacatacatgattca 294
              ||||||||||||||||||||
Sbjct: 103667 atacatacatacatgattca 103648



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   atacatacatacatgattca 294
             ||||||||||||||||||||
Sbjct: 96692 atacatacatacatgattca 96673



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   atacatacatacatgattca 294
             ||||||||||||||||||||
Sbjct: 80564 atacatacatacatgattca 80545
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>emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chromosome X, complete
             sequence
          Length = 169053

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   aactaaatacatacatacat 288
             ||||||||||||||||||||
Sbjct: 83547 aactaaatacatacatacat 83528


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,361,086
Number of Sequences: 3902068
Number of extensions: 4361086
Number of successful extensions: 277573
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 277133
Number of HSP's gapped (non-prelim): 440
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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