ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl18g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3 31 0.95
2UN13B_HUMAN (O14795) Unc-13 homolog B (Munc13-2) (munc13) 30 1.6
3P2Y10_HUMAN (O00398) Putative P2Y purinoceptor 10 (P2Y10) (P2Y-l... 29 3.6
4PRP4_SCHPO (Q07538) Serine/threonine-protein kinase prp4 (EC 2.7... 28 8.0
5C79A2_ARATH (Q9FLC8) Cytochrome P450 79A2 (EC 1.-.-.-) 28 8.0
6SIN1_SCHPO (Q9P7Y9) Stress-activated map kinase-interacting prot... 28 8.0
7HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4... 28 8.0

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 90  EQLSRLQQPHAADPPGSQHNKVHTAHRSHT 179
           +Q S+LQ PH+  PP  QH + H  H+  T
Sbjct: 406 QQHSQLQPPHSQHPPPHQHIQHHPNHQHQT 435



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>UN13B_HUMAN (O14795) Unc-13 homolog B (Munc13-2) (munc13)|
          Length = 1591

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 84  GTEQLSRLQQPHAADPPGSQHNKVHTAHRSHT 179
           G+ QLS L Q H  D    + + +H+ H SH+
Sbjct: 270 GSSQLSELDQYHEQDDDHRETDSIHSCHSSHS 301



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>P2Y10_HUMAN (O00398) Putative P2Y purinoceptor 10 (P2Y10) (P2Y-like receptor)|
          Length = 339

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 189 KTCWCDFCVRCELYYVVTLVGQLRVVAVIGLVALFLLFNYCEWKTYV 49
           K+C+ D   +      V LVG + V  + G V   ++  +C WKT +
Sbjct: 179 KSCFADLGYK--QMNAVALVGMITVAELAGFVIPVIIIAWCTWKTTI 223



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>PRP4_SCHPO (Q07538) Serine/threonine-protein kinase prp4 (EC 2.7.11.1)|
          Length = 477

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 84  GTEQLSRLQQPHAADPPGSQ---HNKVHTAHRSHTNKSSQQFIGKLRDTLSRY 233
           G +++S L++  AAD  G Q   H + H  H++H     +     LRD L ++
Sbjct: 200 GLKEVSILERLQAADREGKQHIIHYERHFMHKNHLCMVFEMLSLNLRDILKKF 252



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>C79A2_ARATH (Q9FLC8) Cytochrome P450 79A2 (EC 1.-.-.-)|
          Length = 529

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +3

Query: 81  VGTEQLSRLQQPHAADPPGSQHNKVHTAHRSH-TNKSSQQFIGKLR----DTLSRYL 236
           +GTE  SR     A +P G Q  K+     SH T+K S Q + + R    D L RY+
Sbjct: 115 MGTEYCSRGYLTVAVEPQGEQWKKMRRVVASHVTSKKSFQMMLQKRTEEADNLVRYI 171



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>SIN1_SCHPO (Q9P7Y9) Stress-activated map kinase-interacting protein 1|
           (SAPK-interacting protein 1)
          Length = 665

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
 Frame = +3

Query: 99  SRLQQPHAADPPGSQH--------NKVHTAHRSHTNKSSQQFIGKLRDTLS 227
           +++++  AA P  S+H        NK H  H S T+  SQ+    ++DTL+
Sbjct: 386 AQIKENQAAYPFKSKHPTSIPEANNKTHIRHTSSTSSQSQKQAQDVKDTLN 436



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>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +3

Query: 90  EQLSRLQQPHAADPPGSQ--HNKVHTAHRSHTNKSSQQFIGKL-----RDTLSRYLGIY 245
           + +S+ QQP +  PP  Q    K   +    + +S + FIG L      D L  Y G Y
Sbjct: 124 QTMSQFQQPSSQSPPQQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKY 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,658,622
Number of Sequences: 219361
Number of extensions: 568776
Number of successful extensions: 1508
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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