Clone Name | rbastl18g07 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_123304.3| Arabidopsis thaliana CDC2CAT; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G39420 (CDC2CAT) mRNA, complete cds Length = 2329 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aatctcagcaaaaacacatc 101 |||||||||||||||||||| Sbjct: 1049 aatctcagcaaaaacacatc 1030
>ref|XM_473088.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2247 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 actctttcaacaagagtagc 70 |||||||||||||||||||| Sbjct: 1277 actctttcaacaagagtagc 1258
>emb|AL591852.10| Human DNA sequence from clone RP11-249H20 on chromosome 9 Contains part of the DAPK1 gene for death-assodeath-associated protein kinase 1, complete sequence Length = 72904 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tctcactcactcaaagtctc 269 |||||||||||||||||||| Sbjct: 61707 tctcactcactcaaagtctc 61726
>gb|DQ436495.1| Homo sapiens death-associated protein kinase 1 (DAPK1) gene, complete cds Length = 212999 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tctcactcactcaaagtctc 269 |||||||||||||||||||| Sbjct: 134513 tctcactcactcaaagtctc 134532
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 actctttcaacaagagtagc 70 |||||||||||||||||||| Sbjct: 69087 actctttcaacaagagtagc 69068
>gb|AC104117.2| Homo sapiens chromosome 5 clone RP11-281O15, complete sequence Length = 211975 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 aaaaacacatcatctatgta 110 |||||||||||||||||||| Sbjct: 73982 aaaaacacatcatctatgta 73963
>gb|AF120153.1|AF120153 Arabidopsis thaliana cyclin-dependent kinase CDC2C (CDC2CAt) mRNA, complete cds Length = 2367 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aatctcagcaaaaacacatc 101 |||||||||||||||||||| Sbjct: 1066 aatctcagcaaaaacacatc 1047
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 actctttcaacaagagtagc 70 |||||||||||||||||||| Sbjct: 25187420 actctttcaacaagagtagc 25187401
>gb|BT004267.1| Arabidopsis thaliana clone RAFL15-28-M08 (R50084) At5g39420 mRNA, complete sequence Length = 2347 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aatctcagcaaaaacacatc 101 |||||||||||||||||||| Sbjct: 1049 aatctcagcaaaaacacatc 1030
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 cctgcggtgactctttcaac 61 |||||||||||||||||||| Sbjct: 2219749 cctgcggtgactctttcaac 2219730
>dbj|AB009054.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL8 Length = 83450 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aatctcagcaaaaacacatc 101 |||||||||||||||||||| Sbjct: 28939 aatctcagcaaaaacacatc 28920
>gb|U83118.1|ATU83118 Arabidopsis thaliana cdc2-like protein gene, complete cds Length = 2960 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aatctcagcaaaaacacatc 101 |||||||||||||||||||| Sbjct: 1249 aatctcagcaaaaacacatc 1230
>dbj|AK099205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022C17, full insert sequence Length = 2670 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 actctttcaacaagagtagc 70 |||||||||||||||||||| Sbjct: 1209 actctttcaacaagagtagc 1228
>dbj|AK060812.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-H03, full insert sequence Length = 2780 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 actctttcaacaagagtagc 70 |||||||||||||||||||| Sbjct: 1554 actctttcaacaagagtagc 1535
>emb|CR933139.1| Uncultured bacterium partial 16S rRNA gene from clone 012E05_B_SD_P15 Length = 1358 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cctcctcacaccctgcggtg 50 |||||||||||||||||||| Sbjct: 1132 cctcctcacaccctgcggtg 1113
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 actctttcaacaagagtagc 70 |||||||||||||||||||| Sbjct: 134847 actctttcaacaagagtagc 134828 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,234,410 Number of Sequences: 3902068 Number of extensions: 3234410 Number of successful extensions: 50610 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50578 Number of HSP's gapped (non-prelim): 32 length of query: 272 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 250 effective length of database: 17,147,199,772 effective search space: 4286799943000 effective search space used: 4286799943000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)