ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl18g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450107.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.034
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.034
3dbj|AP006062.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.034
4dbj|AK103665.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.034
5emb|AL034376.10|HS529N6 Human DNA sequence from clone RP4-529N6 ... 42 0.53
6gb|AC015801.25|AC015801 Homo sapiens chromosome 17, clone RP11-8... 42 0.53
7dbj|AK174886.1| Ciona intestinalis cDNA, clone:citb030d06, full ... 42 0.53
8gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, com... 40 2.1
9gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, com... 40 2.1
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
11emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb... 40 2.1
12dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.1
13dbj|AK069805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.1
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.1
15emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 40 2.1
16emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, ... 40 2.1
17emb|AL845316.3| Mouse DNA sequence from clone RP23-348I7 on chro... 40 2.1
18emb|AL591366.15| Mouse DNA sequence from clone RP23-80N1 on chro... 40 2.1
19gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome... 38 8.3
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 8.3
21gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome... 38 8.3
22gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, c... 38 8.3
23gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, c... 38 8.3
24gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7... 38 8.3
25emb|AL356215.11| Human DNA sequence from clone RP4-607I7 on chro... 38 8.3
26emb|BX897675.1| Neurospora crassa DNA linkage group IV BAC clone... 38 8.3
27gb|AC130650.2| Homo sapiens chromosome 16 clone CTA-276F8, compl... 38 8.3
28dbj|BS000678.1| Pan troglodytes chromosome Y clone: PTB-448K11, ... 38 8.3
29dbj|BS000682.1| Pan troglodytes chromosome Y clone: PTB-178C02, ... 38 8.3
30gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 38 8.3
31gb|AC008533.9| Homo sapiens chromosome 5 clone CTC-483L24, compl... 38 8.3
32gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 ... 38 8.3
33gb|AC005818.6| Mus musculus strain 129S6/SvEvTac chromosome 10 c... 38 8.3
34gb|AC159024.2| Pan troglodytes BAC clone CH251-479P21 from chrom... 38 8.3
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
38gb|AC154111.2| Pan troglodytes BAC clone CH251-110D7 from chromo... 38 8.3
39gb|AC156942.2| Pan troglodytes BAC clone CH251-541P6 from chromo... 38 8.3
40gb|AC004968.1|AC004968 Homo sapiens PAC clone RP5-1119N5 from 14... 38 8.3
41gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 38 8.3
42emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 i... 38 8.3
43dbj|AP004347.5| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
44dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
45dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
46dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
47dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
48ref|XM_311312.2| Anopheles gambiae str. PEST ENSANGP00000017447 ... 38 8.3
49gb|U91322.1|HSU91322 Human chromosome 16p13 BAC clone CIT987SK-2... 38 8.3
50gb|AC170923.3| Pan troglodytes BAC clone CH251-394N14 from chrom... 38 8.3
51emb|AL929209.17| Mouse DNA sequence from clone RP23-415C3 on chr... 38 8.3
52gb|U15971.1|OSU15971 Oryza sativa ubiquitin conjugating enzyme (... 38 8.3 
>ref|XM_450107.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 72/86 (83%), Gaps = 8/86 (9%)
 Strand = Plus / Minus

                                                                        
Query: 44   attacacccctgaatctgggaaagc---taaagaggtgaca--gggggagatctaaag-- 96
            |||||||||||||||| ||||||||   ||||| || || |  |||||||||||| ||  
Sbjct: 2884 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 2825

                                      
Query: 97   -ttctttttcttatgtatggtacaca 121
             ||||| |||||||||||||||||||
Sbjct: 2824 tttcttcttcttatgtatggtacaca 2799
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 72/86 (83%), Gaps = 8/86 (9%)
 Strand = Plus / Minus

                                                                           
Query: 44      attacacccctgaatctgggaaagc---taaagaggtgaca--gggggagatctaaag-- 96
               |||||||||||||||| ||||||||   ||||| || || |  |||||||||||| ||  
Sbjct: 1732686 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 1732627

                                         
Query: 97      -ttctttttcttatgtatggtacaca 121
                ||||| |||||||||||||||||||
Sbjct: 1732626 tttcttcttcttatgtatggtacaca 1732601
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>dbj|AP006062.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0415D04
          Length = 176627

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 72/86 (83%), Gaps = 8/86 (9%)
 Strand = Plus / Minus

                                                                          
Query: 44     attacacccctgaatctgggaaagc---taaagaggtgaca--gggggagatctaaag-- 96
              |||||||||||||||| ||||||||   ||||| || || |  |||||||||||| ||  
Sbjct: 119258 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 119199

                                        
Query: 97     -ttctttttcttatgtatggtacaca 121
               ||||| |||||||||||||||||||
Sbjct: 119198 tttcttcttcttatgtatggtacaca 119173
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>dbj|AK103665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135J15, full
            insert sequence
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 72/86 (83%), Gaps = 8/86 (9%)
 Strand = Plus / Minus

                                                                        
Query: 44   attacacccctgaatctgggaaagc---taaagaggtgaca--gggggagatctaaag-- 96
            |||||||||||||||| ||||||||   ||||| || || |  |||||||||||| ||  
Sbjct: 2884 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 2825

                                      
Query: 97   -ttctttttcttatgtatggtacaca 121
             ||||| |||||||||||||||||||
Sbjct: 2824 tttcttcttcttatgtatggtacaca 2799
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>emb|AL034376.10|HS529N6 Human DNA sequence from clone RP4-529N6 on chromosome 6p24.1-25.3
             Contains a novel gene, complete sequence
          Length = 131819

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    taaagttctttttcttatgta 112
             |||||||||||||||||||||
Sbjct: 95137 taaagttctttttcttatgta 95157
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>gb|AC015801.25|AC015801 Homo sapiens chromosome 17, clone RP11-854A13, complete sequence
          Length = 185351

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    ctaaagaggtgacagggggagatct 92
             ||||||||||||||||| |||||||
Sbjct: 92548 ctaaagaggtgacagggagagatct 92524
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>dbj|AK174886.1| Ciona intestinalis cDNA, clone:citb030d06, full insert sequence
          Length = 576

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  ttctttttcttatgtatggta 117
           |||||||||||||||||||||
Sbjct: 397 ttctttttcttatgtatggta 417
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>gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, complete sequence
          Length = 170041

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     gttctttttcttatgtatgg 115
              ||||||||||||||||||||
Sbjct: 148277 gttctttttcttatgtatgg 148258
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>gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, complete sequence
          Length = 203628

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gttctttttcttatgtatgg 115
             ||||||||||||||||||||
Sbjct: 18810 gttctttttcttatgtatgg 18829
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 43       aattacacccctgaatctgg 62
                ||||||||||||||||||||
Sbjct: 20897954 aattacacccctgaatctgg 20897973
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>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aattacacccctgaatctgg 62
             ||||||||||||||||||||
Sbjct: 99681 aattacacccctgaatctgg 99700
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>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
            insert sequence
          Length = 2509

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   aattacacccctgaatctgg 62
            ||||||||||||||||||||
Sbjct: 1719 aattacacccctgaatctgg 1738
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>dbj|AK069805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030L10, full
            insert sequence
          Length = 1829

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   aattacacccctgaatctgg 62
            ||||||||||||||||||||
Sbjct: 998  aattacacccctgaatctgg 1017
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 43       aattacacccctgaatctgg 62
                ||||||||||||||||||||
Sbjct: 20824168 aattacacccctgaatctgg 20824187
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    aattacacccctgaatctgg 62
             ||||||||||||||||||||
Sbjct: 61041 aattacacccctgaatctgg 61022
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>emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, complete sequence
          Length = 155612

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ggtctttcaggatgatcatc 153
             ||||||||||||||||||||
Sbjct: 64943 ggtctttcaggatgatcatc 64924
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>emb|AL845316.3| Mouse DNA sequence from clone RP23-348I7 on chromosome X, complete
             sequence
          Length = 197688

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    agttctttttcttatgtatg 114
             ||||||||||||||||||||
Sbjct: 53722 agttctttttcttatgtatg 53703
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>emb|AL591366.15| Mouse DNA sequence from clone RP23-80N1 on chromosome 11, complete
             sequence
          Length = 117612

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 9     gtccaaagaggggctctaaaactc 32
             ||||||||||||| ||||||||||
Sbjct: 77732 gtccaaagagggggtctaaaactc 77755
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>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03
             map E1419S, complete sequence
          Length = 150945

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 110   gtatggtacacaggaaaacgtta 132
             ||||||| |||||||||||||||
Sbjct: 58563 gtatggtgcacaggaaaacgtta 58541
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 101      ttttcttatgtatggtaca 119
                |||||||||||||||||||
Sbjct: 33032837 ttttcttatgtatggtaca 33032819



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 110      gtatggtacacaggaaaacgtta 132
                ||||||| |||||||||||||||
Sbjct: 23610480 gtatggtgcacaggaaaacgtta 23610458
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>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence
          Length = 222814

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      catttcagtccaaagaggg 20
              |||||||||||||||||||
Sbjct: 144598 catttcagtccaaagaggg 144616
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>gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, complete sequence
          Length = 194086

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 102   tttcttatgtatggtacac 120
             |||||||||||||||||||
Sbjct: 18972 tttcttatgtatggtacac 18954
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>gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, complete sequence
          Length = 214913

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 102    tttcttatgtatggtacac 120
              |||||||||||||||||||
Sbjct: 211029 tttcttatgtatggtacac 211011
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>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete
              sequence
          Length = 253924

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     aaagttctttttcttatgt 111
              |||||||||||||||||||
Sbjct: 250953 aaagttctttttcttatgt 250971
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>emb|AL356215.11| Human DNA sequence from clone RP4-607I7 on chromosome 11p11.2-12 Contains
              the start of the CD44 (CD44 antigen (homing function
              andnIndian blood group system)) gene, ESTs, STSs, GSSs and
              a CpG island, complete sequence
          Length = 150533

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     atctaaagttctttttctt 107
              |||||||||||||||||||
Sbjct: 130631 atctaaagttctttttctt 130613
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>emb|BX897675.1| Neurospora crassa DNA linkage group IV BAC clone B2E7
          Length = 68291

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    aaaactcgagtaacacaaa 44
             |||||||||||||||||||
Sbjct: 40980 aaaactcgagtaacacaaa 40962
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>gb|AC130650.2| Homo sapiens chromosome 16 clone CTA-276F8, complete sequence
          Length = 215286

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 96    gttctttttcttatgtatg 114
             |||||||||||||||||||
Sbjct: 99862 gttctttttcttatgtatg 99844
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>dbj|BS000678.1| Pan troglodytes chromosome Y clone: PTB-448K11, complete sequence
          Length = 195684

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 108   atgtatggtacacaggaaa 126
             |||||||||||||||||||
Sbjct: 91556 atgtatggtacacaggaaa 91538
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>dbj|BS000682.1| Pan troglodytes chromosome Y clone: PTB-178C02, complete sequence
          Length = 222422

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 108   atgtatggtacacaggaaa 126
             |||||||||||||||||||
Sbjct: 93468 atgtatggtacacaggaaa 93450
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 108      atgtatggtacacaggaaa 126
                |||||||||||||||||||
Sbjct: 12755451 atgtatggtacacaggaaa 12755469



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 108     atgtatggtacacaggaaa 126
               |||||||||||||||||||
Sbjct: 5143133 atgtatggtacacaggaaa 5143115



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 108     atgtatggtacacaggaaa 126
               |||||||||||||||||||
Sbjct: 1487924 atgtatggtacacaggaaa 1487906
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>gb|AC008533.9| Homo sapiens chromosome 5 clone CTC-483L24, complete sequence
          Length = 254730

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 92     taaagttctttttcttatg 110
              |||||||||||||||||||
Sbjct: 150242 taaagttctttttcttatg 150224
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>gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-481n4,
              complete sequence
          Length = 204653

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    tttcttatgtatggtacac 120
              |||||||||||||||||||
Sbjct: 179682 tttcttatgtatggtacac 179700
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>gb|AC005818.6| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-411d9,
             complete sequence
          Length = 144723

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   tttcttatgtatggtacac 120
             |||||||||||||||||||
Sbjct: 31068 tttcttatgtatggtacac 31086
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>gb|AC159024.2| Pan troglodytes BAC clone CH251-479P21 from chromosome y, complete
              sequence
          Length = 186141

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 108    atgtatggtacacaggaaa 126
              |||||||||||||||||||
Sbjct: 123277 atgtatggtacacaggaaa 123295
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 89       atctaaagttctttttctt 107
                |||||||||||||||||||
Sbjct: 16893333 atctaaagttctttttctt 16893351
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 101      ttttcttatgtatggtaca 119
                |||||||||||||||||||
Sbjct: 33123347 ttttcttatgtatggtaca 33123329



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 110      gtatggtacacaggaaaacgtta 132
                ||||||| |||||||||||||||
Sbjct: 23603508 gtatggtgcacaggaaaacgtta 23603486
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 98       tctttttcttatgtatggtacac 120
                ||||||||||||| |||||||||
Sbjct: 35120985 tctttttcttatgaatggtacac 35120963



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    caaattacacccctgaatc 59
             |||||||||||||||||||
Sbjct: 43865 caaattacacccctgaatc 43883
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>gb|AC154111.2| Pan troglodytes BAC clone CH251-110D7 from chromosome y, complete
             sequence
          Length = 185601

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 108   atgtatggtacacaggaaa 126
             |||||||||||||||||||
Sbjct: 84149 atgtatggtacacaggaaa 84167
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>gb|AC156942.2| Pan troglodytes BAC clone CH251-541P6 from chromosome unknown, complete
             sequence
          Length = 164196

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    taaagttctttttcttatg 110
             |||||||||||||||||||
Sbjct: 85331 taaagttctttttcttatg 85349
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>gb|AC004968.1|AC004968 Homo sapiens PAC clone RP5-1119N5 from 14q24.3, complete sequence
          Length = 108822

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    acaaattacacccctgaat 58
             |||||||||||||||||||
Sbjct: 46085 acaaattacacccctgaat 46103
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>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
             sequence
          Length = 139823

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   ttttcttatgtatggtaca 119
             |||||||||||||||||||
Sbjct: 90471 ttttcttatgtatggtaca 90489
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>emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 in linkage group 9,
             complete sequence
          Length = 159458

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 130   ttacggtctttcaggatga 148
             |||||||||||||||||||
Sbjct: 15929 ttacggtctttcaggatga 15911
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>dbj|AP004347.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0675B10
          Length = 136229

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 89    atctaaagttctttttctt 107
             |||||||||||||||||||
Sbjct: 69087 atctaaagttctttttctt 69105
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>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1103_E04
          Length = 111354

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 89     atctaaagttctttttctt 107
              |||||||||||||||||||
Sbjct: 109900 atctaaagttctttttctt 109918
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1202_E07
          Length = 145014

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 98    tctttttcttatgtatggtacac 120
             ||||||||||||| |||||||||
Sbjct: 16341 tctttttcttatgaatggtacac 16319
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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 98    tctttttcttatgtatggtacac 120
             ||||||||||||| |||||||||
Sbjct: 94148 tctttttcttatgaatggtacac 94126
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>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1370C05
          Length = 148271

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    caaattacacccctgaatc 59
             |||||||||||||||||||
Sbjct: 38474 caaattacacccctgaatc 38492
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>ref|XM_311312.2| Anopheles gambiae str. PEST ENSANGP00000017447
           (ENSANGG00000014958), partial mRNA
          Length = 1278

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 89  atctaaagttctttttctt 107
           |||||||||||||||||||
Sbjct: 203 atctaaagttctttttctt 221
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>gb|U91322.1|HSU91322 Human chromosome 16p13 BAC clone CIT987SK-276F8 complete sequence
          Length = 215286

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     gttctttttcttatgtatg 114
              |||||||||||||||||||
Sbjct: 115425 gttctttttcttatgtatg 115443
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>gb|AC170923.3| Pan troglodytes BAC clone CH251-394N14 from chromosome y, complete
             sequence
          Length = 176129

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 108   atgtatggtacacaggaaa 126
             |||||||||||||||||||
Sbjct: 25218 atgtatggtacacaggaaa 25236
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>emb|AL929209.17| Mouse DNA sequence from clone RP23-415C3 on chromosome 2, complete
              sequence
          Length = 210790

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 49     acccctgaatctgggaaag 67
              |||||||||||||||||||
Sbjct: 137165 acccctgaatctgggaaag 137147
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>gb|U15971.1|OSU15971 Oryza sativa ubiquitin conjugating enzyme (UBC) gene, complete cds
          Length = 2088

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  aaattacacccctgaatct 60
           |||||||||||||||||||
Sbjct: 643 aaattacacccctgaatct 625


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,812,268
Number of Sequences: 3902068
Number of extensions: 1812268
Number of successful extensions: 106684
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106197
Number of HSP's gapped (non-prelim): 487
length of query: 171
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 149
effective length of database: 17,147,199,772
effective search space: 2554932766028
effective search space used: 2554932766028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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