>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 121   aaaacaatgtatatagttctct 142
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599

>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 185    ttcatataagctctcgactgagtttc 210
              |||||||| |||||||||||||||||
Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306

>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 104  ttattgagcttaggggaaaaacaatgtat 132
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415

>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 104    ttattgagcttaggggaaaaa 124
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886

>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   ttattgagcttaggggaaaaa 124
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467

>emb|AL391221.15| Human DNA sequence from clone RP11-771D21 on chromosome 6 Contains the 5'
              end of the PKHD1 gene for polycystic kidney and hepatic
              disease 1 (autosomal recessive) (TIG multiple domains-1,
              FCYT, ARPKD), a novel gene and the IL17 gene for
              interleukin 17 (cytotoxic T-lymphocyte-associated serine
              esterase 8) (CTLA8), complete sequence
          Length = 152546

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     ctgcctctacaaagaaaaaac 80
              |||||||||||||||||||||
Sbjct: 102414 ctgcctctacaaagaaaaaac 102394

>emb|AL031660.16|HS387E22 Human DNA sequence from clone RP3-387E22 on chromosome 20q11.23-12
             Contains STSs and GSSs, complete sequence
          Length = 49838

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    tctgcctctacaaagaaaaaa 79
             |||||||||||||||||||||
Sbjct: 37739 tctgcctctacaaagaaaaaa 37759

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 104      ttattgagcttaggggaaaaacaatgtat 132
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399

>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 104   ttattgagcttaggggaaaaacaatgtat 132
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648

>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 104    ttattgagcttaggggaaaaacaatgtat 132
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920

>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 104  ttattgagcttaggggaaaaacaatgtat 132
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413

>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 104  ttattgagcttaggggaaaaacaatgtat 132
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431

>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 172    ttcttactaagttttcatata 192
              |||||||||||||||||||||
Sbjct: 141218 ttcttactaagttttcatata 141198

>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     gtccacaaaggacacagacct 104
              |||||||||||||||||||||
Sbjct: 152418 gtccacaaaggacacagacct 152438

>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   gaaaaacaatgtatatagttctct 142
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303

>gb|AC149132.1| Pan troglodytes chromosome X clone PTB-099J01 map human ortholog p22.12
             complete sequence
          Length = 215862

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    ctgcctctacaaagaaaaaa 79
             ||||||||||||||||||||
Sbjct: 35799 ctgcctctacaaagaaaaaa 35818

>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   atatagttctcttcttctaatggc 154
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565

>emb|AL732366.7| Human DNA sequence from clone RP11-393H10 on chromosome X Contains a
              novel gene (FLJ14503), the EIF1A gene for eukaryotic
              translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A,
              eIF-4C), the 3' end of the RPS6KA3 gene for ribosomal
              protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3,
              RSK2, MRX19, ISPK-1, MAPKAPK1B), a novel gene and three CpG
              islands, complete sequence
          Length = 187275

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ctgcctctacaaagaaaaaa 79
              ||||||||||||||||||||
Sbjct: 133267 ctgcctctacaaagaaaaaa 133286



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    ctgcctctacaaagaaaaaa 79
             ||||||||||||||||||||
Sbjct: 45343 ctgcctctacaaagaaaaaa 45324

>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ25636) and the 5' end of a novel
              gene (FLJ20276), complete sequence
          Length = 162126

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 8      ttccaatcctgaatttaatttcca 31
              |||||||||||||||| |||||||
Sbjct: 145724 ttccaatcctgaatttcatttcca 145701

>emb|AL139000.9| Human DNA sequence from clone RP11-173M10 on chromosome 13q14.3-21.31,
              complete sequence
          Length = 157028

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aaagaaaaaacgcagtccac 89
              ||||||||||||||||||||
Sbjct: 147075 aaagaaaaaacgcagtccac 147094

>emb|AL096768.7|HSJ858B16 Human DNA sequence from clone RP5-858B16 on chromosome 22 Contains the
             3' end of the gene for homolog of yeast Sfi1 (SFI1), the
             3' end of the PISD gene for Phosphatidylserine
             decarboxylase and a CpG isalnd, complete sequence
          Length = 36676

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tgcctctacaaagaaaaaac 80
             ||||||||||||||||||||
Sbjct: 36345 tgcctctacaaagaaaaaac 36326

>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ataaatatagtctctctttc 174
              ||||||||||||||||||||
Sbjct: 181778 ataaatatagtctctctttc 181797

>gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromosome unknown, complete
              sequence
          Length = 180132

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tgcctctacaaagaaaaaac 80
              ||||||||||||||||||||
Sbjct: 152391 tgcctctacaaagaaaaaac 152372

>gb|AC163750.4| Pan troglodytes BAC clone CH251-295N9 from chromosome unknown, complete
              sequence
          Length = 182445

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     tgcctctacaaagaaaaaac 80
              ||||||||||||||||||||
Sbjct: 147477 tgcctctacaaagaaaaaac 147496

>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   tgtatatagttctcttcttc 147
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157

>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaacaatgtatatagttct 140
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711

>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 131  atatagttctcttcttctaatggc 154
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910

>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   ataaatatagtctctctttc 174
             ||||||||||||||||||||
Sbjct: 88307 ataaatatagtctctctttc 88326

>gb|AC115625.3| Homo sapiens BAC clone RP11-588E23 from 2, complete sequence
          Length = 163505

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   ctgcctctacaaagaaaaaa 79
            ||||||||||||||||||||
Sbjct: 7088 ctgcctctacaaagaaaaaa 7107

>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tcttctaatggcataaatat 162
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403

>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccaaaactttcatatctaaa 239
             ||||||||||||||||||||
Sbjct: 29599 ccaaaactttcatatctaaa 29580

>gb|AC010219.4|AC010219 Homo sapiens chromosome 5 clone CTC-251I16, complete sequence
          Length = 127922

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    ctgcctctacaaagaaaaaa 79
             ||||||||||||||||||||
Sbjct: 55843 ctgcctctacaaagaaaaaa 55862

>gb|AC006442.1|AC006442 Homo sapiens, clone hRPK.7_A_1, complete sequence
          Length = 155935

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aaagaaaaaacgcagtccac 89
             ||||||||||||||||||||
Sbjct: 31055 aaagaaaaaacgcagtccac 31036

>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete
              sequences
          Length = 175110

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    aaactttcatatctaaacca 242
              ||||||||||||||||||||
Sbjct: 139050 aaactttcatatctaaacca 139031

>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
             sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   aaactttcatatctaaacca 242
             ||||||||||||||||||||
Sbjct: 31136 aaactttcatatctaaacca 31117

>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   atatagttctcttcttctaatggc 154
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607

>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   atatagttctcttcttctaatggc 154
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,463,313
Number of Sequences: 3902068
Number of extensions: 3463313
Number of successful extensions: 62061
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61967
Number of HSP's gapped (non-prelim): 94
length of query: 288
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 266
effective length of database: 17,147,199,772
effective search space: 4561155139352
effective search space used: 4561155139352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)