>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  103 bits (52), Expect = 4e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                            
Query: 245      acaaatcaaagcttctttggaaacttgtatgttttcttgaggaactttgtggccgcctca 304
                ||||||||||| |||||||| |  ||||||| |||||||||||||||||| |||||||||
Sbjct: 18474212 acaaatcaaagtttctttggtagattgtatgctttcttgaggaactttgtagccgcctca 18474271

                                                        
Query: 305      tcgtaccggtagcacaaaactcgcaggatagtgttcgggt 344
                || |  |||||||||||||||||||  || ||||||||||
Sbjct: 18474272 tcatttcggtagcacaaaactcgcaaaattgtgttcgggt 18474311

>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0671F11
          Length = 159409

 Score =  103 bits (52), Expect = 4e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                         
Query: 245   acaaatcaaagcttctttggaaacttgtatgttttcttgaggaactttgtggccgcctca 304
             ||||||||||| |||||||| |  ||||||| |||||||||||||||||| |||||||||
Sbjct: 56235 acaaatcaaagtttctttggtagattgtatgctttcttgaggaactttgtagccgcctca 56294

                                                     
Query: 305   tcgtaccggtagcacaaaactcgcaggatagtgttcgggt 344
             || |  |||||||||||||||||||  || ||||||||||
Sbjct: 56295 tcatttcggtagcacaaaactcgcaaaattgtgttcgggt 56334

>ref|XM_482187.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2928

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                        
Query: 250  tcaaagcttctttggaaacttgtatgttttcttgaggaactttgtggccgcctcatcgta 309
            |||||| |||||||| |  ||||||| |||||||||||||||||| ||||||||||| | 
Sbjct: 2928 tcaaagtttctttggtagattgtatgctttcttgaggaactttgtagccgcctcatcatt 2869

                                               
Query: 310  ccggtagcacaaaactcgcaggatagtgttcgggt 344
             |||||||||||||||||||  || ||||||||||
Sbjct: 2868 tcggtagcacaaaactcgcaaaattgtgttcgggt 2834

>gb|AY105856.1| Zea mays PCO109734 mRNA sequence
          Length = 886

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 96/114 (84%)
 Strand = Plus / Minus

                                                                       
Query: 244 cacaaatcaaagcttctttggaaacttgtatgttttcttgaggaactttgtggccgcctc 303
           ||||| ||||| |||||| || |  ||||| |||||||||||||||||||| || | |||
Sbjct: 520 cacaagtcaaatcttcttcggtaggttgtaagttttcttgaggaactttgtagctgtctc 461

                                                                 
Query: 304 atcgtaccggtagcacaaaactcgcaggatagtgttcgggtcatttgcactcca 357
           ||| | ||||||||||| |||||||||||  ||||| || ||||||| ||||||
Sbjct: 460 atcattccggtagcacagaactcgcaggactgtgttaggctcatttggactcca 407

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 275      gttttcttgaggaactttgtggccgcctcatcgtaccggtagcacaaaactcgcagga 332
                |||||||| |||||||| || |||| |||||| || |||||||||| |||||||||||
Sbjct: 10804196 gttttctttaggaacttggtagccgtctcatcataacggtagcacagaactcgcagga 10804253

>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 275   gttttcttgaggaactttgtggccgcctcatcgtaccggtagcacaaaactcgcagga 332
             |||||||| |||||||| || |||| |||||| || |||||||||| |||||||||||
Sbjct: 27919 gttttctttaggaacttggtagccgtctcatcataacggtagcacagaactcgcagga 27976

>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                        
Query: 275    gttttcttgaggaactttgtggccgcctcatcgtaccggtagcacaaaactcgcagga 332
              |||||||| |||||||| || |||| |||||| || |||||||||| |||||||||||
Sbjct: 140814 gttttctttaggaacttggtagccgtctcatcataacggtagcacagaactcgcagga 140871

>dbj|AK102844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109P13, full
            insert sequence
          Length = 2899

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 275  gttttcttgaggaactttgtggccgcctcatcgtaccggtagcacaaaactcgcagga 332
            |||||||| |||||||| || |||| |||||| || |||||||||| |||||||||||
Sbjct: 2400 gttttctttaggaacttggtagccgtctcatcataacggtagcacagaactcgcagga 2343

>dbj|AK070620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062D09, full
            insert sequence
          Length = 3538

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 275  gttttcttgaggaactttgtggccgcctcatcgtaccggtagcacaaaactcgcagga 332
            |||||||| |||||||| || |||| |||||| || |||||||||| |||||||||||
Sbjct: 3030 gttttctttaggaacttggtagccgtctcatcataacggtagcacagaactcgcagga 2973

>gb|AC092372.3| Homo sapiens chromosome 5 clone RP11-58M12, complete sequence
          Length = 101220

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 143   gactacttaattttttcttcac 164
             ||||||||||||||||||||||
Sbjct: 27387 gactacttaattttttcttcac 27408

>gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, complete sequence
          Length = 219258

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 143   gactacttaattttttcttcac 164
             ||||||||||||||||||||||
Sbjct: 89905 gactacttaattttttcttcac 89926

>gb|AC012624.6| Homo sapiens chromosome 5 clone CTD-2082I17, complete sequence
          Length = 134365

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    gactacttaattttttcttcac 164
              ||||||||||||||||||||||
Sbjct: 117792 gactacttaattttttcttcac 117771

>gb|AC026778.4|AC026778 Homo sapiens chromosome 5 clone CTC-428I11, complete sequence
          Length = 195433

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 143   gactacttaattttttcttcac 164
             ||||||||||||||||||||||
Sbjct: 30187 gactacttaattttttcttcac 30208

>gb|AC019233.7|AC019233 Homo sapiens clone RP11-631O4, complete sequence
          Length = 263876

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 233   cagcagacatacacaaatcaaa 254
             ||||||||||||||||||||||
Sbjct: 29444 cagcagacatacacaaatcaaa 29465

>emb|CT030695.5| Mouse DNA sequence from clone RP23-259F10 on chromosome 9, complete
             sequence
          Length = 173589

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 256   cttctttggaaacttgtatgtt 277
             ||||||||||||||||||||||
Sbjct: 55304 cttctttggaaacttgtatgtt 55325

>gb|AC182032.3| Spermophilus tridecemlineatus clone VMRC20-712F8, complete sequence
          Length = 172253

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   aaacttgtatgttttcttgag 285
             |||||||||||||||||||||
Sbjct: 61955 aaacttgtatgttttcttgag 61935

>ref|XM_341326.2| PREDICTED: Rattus norvegicus ADP-ribosyltransferase (NAD+; poly
            (ADP-ribose) polymerase)-like 1 (predicted)
            (Adprtl1_predicted), mRNA
          Length = 6335

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 236  cagacatacacaaatcaaagc 256
            |||||||||||||||||||||
Sbjct: 2938 cagacatacacaaatcaaagc 2958

>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete
            sequence
          Length = 201050

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  gcacaaacatgagaactgga 193
            ||||||||||||||||||||
Sbjct: 3272 gcacaaacatgagaactgga 3253

>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence
          Length = 183993

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tttattcacacatgagtata 37
             ||||||||||||||||||||
Sbjct: 37457 tttattcacacatgagtata 37438

>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence
          Length = 193068

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    gcacaaacatgagaactgga 193
              ||||||||||||||||||||
Sbjct: 104948 gcacaaacatgagaactgga 104967

>ref|XM_534542.2| PREDICTED: Canis familiaris similar to Poly [ADP-ribose]
           polymerase-4 (PARP-4) (Vault poly(ADP-ribose)
           polymerase) (VPARP) (193-kDa vault protein)
           (PARP-related/IalphaI-related H5/proline-rich) (PH5P)
           (LOC477348), mRNA
          Length = 6876

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 cagacatacacaaatcaaag 255
           ||||||||||||||||||||
Sbjct: 973 cagacatacacaaatcaaag 992

>gb|AC158928.6| Mus musculus chromosome 1, clone RP23-228O9, complete sequence
          Length = 179146

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   acacaaatcaaagcttcttt 262
             ||||||||||||||||||||
Sbjct: 37972 acacaaatcaaagcttcttt 37991

>gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, complete sequence
          Length = 169106

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    atctgactacttaatttttt 158
              ||||||||||||||||||||
Sbjct: 127879 atctgactacttaatttttt 127860

>emb|X06623.1|OCPRG5 Rabbit progesterone receptor gene 5' flank
          Length = 3476

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 atacacaaatcaaagcttct 260
           ||||||||||||||||||||
Sbjct: 879 atacacaaatcaaagcttct 898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,237,036
Number of Sequences: 3902068
Number of extensions: 3237036
Number of successful extensions: 61986
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61900
Number of HSP's gapped (non-prelim): 86
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)