>TES_MOUSE (P47226) Testin (TES1/TES2)|
          Length = 423

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 114 RMDPGTMP*RKKGECTNVTIHLYICCSY---EGELYLWAVRLRLDHFHMDHNTLQHSIAY 284
           R  P  +  + K   +  T +   CC +   EGE  ++A R   D        L H   +
Sbjct: 216 RHAPAAVASKDKSAESKKTQYSCYCCKHTTNEGEPAIYAERAGYDK-------LWHPACF 268

Query: 285 VCSRLGYFLVHLVYY 329
           +CS  G  LV ++Y+
Sbjct: 269 ICSTCGELLVDMIYF 283

>FACE2_HUMAN (Q9Y256) CAAX prenyl protease 2 (EC 3.4.22.-) (Prenyl|
           protein-specific endoprotease 2) (Farnesylated
           proteins-converting enzyme 2) (FACE-2) (hRCE1)
          Length = 329

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 150 GECTNVTIH--LYICCSYEGELYLWAVRLRLDH 242
           G C  V++   L + CSY G LY+W   L  DH
Sbjct: 32  GLCCWVSVFSCLSLACSYVGSLYVWKSELPRDH 64

>ASTE_PSEAE (O50177) Succinylglutamate desuccinylase (EC 3.1.-.-)|
          Length = 332

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 371 PIYLTAKGDKGADWVVDEVHQKVTKPGTNISYAVLQSVMI 252
           P YL A+   G  WVVDEV  ++  P   +   +   +++
Sbjct: 288 PGYLLAEDIGGTRWVVDEVGARIIFPNPRVKNGLRAGILV 327

>VE6_HPV45 (P21735) Protein E6|
          Length = 158

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
 Frame = -1

Query: 131 CTRVHSSIQQILVIL*YCQISLE------FLFTELC 42
           CT +++S+Q + +   YC+ +LE      F F +LC
Sbjct: 18  CTELNTSLQDVSIACVYCKATLERTEVYQFAFKDLC 53

>FACE2_MOUSE (P57791) CAAX prenyl protease 2 (EC 3.4.22.-) (Prenyl|
           protein-specific endoprotease 2) (Farnesylated
           proteins-converting enzyme 2) (FACE-2)
          Length = 329

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 183 ICCSYEGELYLWAVRLRLDH 242
           + CSY G LY+W   L  DH
Sbjct: 45  LACSYVGSLYVWKSELPRDH 64

>Y4505_VIBPA (Q87IV1) Putative hydrolase VPA0505 (EC 3.1.-.-)|
          Length = 248

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 374 GPIYLTAKGDKGADWVVDEVHQKVTKPGTNISY 276
           G I L    D+  DWV+   H+ V +P T   +
Sbjct: 82  GEIDLPLSSDQHLDWVIASFHEPVFRPATEAEH 114

>THI1_SCHPO (P36598) Thiamine repressible genes regulatory protein thi1|
           (Transcription factor ntf1)
          Length = 775

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 77  QISLEFLFTELCKNLFIDAKNL 12
           Q+ LE++F+ +C N  ++ KNL
Sbjct: 88  QLCLEYIFSRMCPNFNLETKNL 109

>VE1_HPV08 (P06420) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 603

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 16  FLASIKRFLHSSVKRNSRLI 75
           FLA++K FLHS  KRN  LI
Sbjct: 410 FLAALKDFLHSVPKRNCLLI 429

>MKT1_YEAST (P40850) Protein MKT1|
          Length = 830

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 255 HNTLQHSIAYVCSRLGYFLVHLVYYPVSPFVS 350
           HNT   S AY    + YF+ H   Y V+P+ S
Sbjct: 161 HNTTIDSKAYQNDLIAYFIEHGYMYQVAPYSS 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,409,530
Number of Sequences: 219361
Number of extensions: 1078567
Number of successful extensions: 2400
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2400
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)