ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl18f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 153 5e-34
2gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome... 153 5e-34
3gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome... 153 5e-34
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
5dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
6gb|AY110419.1| Zea mays CL19897_1 mRNA sequence 125 1e-25
7ref|XM_493810.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
8gb|AC078923.12| Homo sapiens 12 BAC RP11-699I16 (Roswell Park Ca... 46 0.081
9gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, com... 42 1.3
10gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, com... 42 1.3
11gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, comp... 42 1.3
12gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, co... 42 1.3
13gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, comp... 42 1.3
14gb|AC018898.17| Homo sapiens 3 BAC RP11-178K17 (Roswell Park Can... 42 1.3
15gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chrom... 42 1.3
16gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 1.3
17gb|AC117521.2| Homo sapiens chromosome 5 clone RP11-1015H3, comp... 42 1.3
18gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, comp... 42 1.3
19ref|XM_938750.1| PREDICTED: Homo sapiens KIAA0825 protein (KIAA0... 42 1.3
20ref|XM_371761.3| PREDICTED: Homo sapiens similar to KIAA0825 pro... 42 1.3
21gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromo... 42 1.3
22gb|AC010448.7| Homo sapiens chromosome 5 clone CTD-2237D2, compl... 42 1.3
23gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromo... 42 1.3
24gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, com... 42 1.3
25gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q... 42 1.3
26dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 1.3
27gb|AC010283.5|AC010283 Homo sapiens chromosome 5 clone CTC-555J2... 42 1.3
28emb|AL928736.5| Zebrafish DNA sequence from clone CH211-202D20, ... 42 1.3
29gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chrom... 42 1.3
30gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chro... 42 1.3
31gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, co... 40 5.0
32ref|XM_632452.1| Dictyostelium discoideum hypothetical protein (... 40 5.0
33gb|BC100406.1| Mus musculus similar to Hypothetical protein DJ11... 40 5.0
34ref|NM_001034101.1| Mus musculus similar to Hypothetical protein... 40 5.0
35ref|XM_891538.2| PREDICTED: Mus musculus similar to PRAME family... 40 5.0
36ref|XM_285846.6| PREDICTED: Mus musculus similar to PRAME family... 40 5.0
37emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in... 40 5.0
38gb|AF545855.1| Rattus norvegicus cryptochrome 1 mRNA, complete cds 40 5.0
39emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 40 5.0
40gb|AC087865.8| Homo sapiens 12 BAC RP11-66D24 (Roswell Park Canc... 40 5.0
41emb|BX640523.14| Zebrafish DNA sequence from clone CH211-271E10 ... 40 5.0
42gb|AC010020.7| Drosophila melanogaster 3L BAC RP98-26I3 (Roswell... 40 5.0
43gb|AC091516.8| Homo sapiens 12q BAC RP11-474L23 (Roswell Park Ca... 40 5.0
44emb|AL928630.15| Mouse DNA sequence from clone RP23-33P17 on chr... 40 5.0
45emb|BX005061.9| Zebrafish DNA sequence from clone CH211-158F5 in... 40 5.0
46gb|AC109638.2| Homo sapiens BAC clone RP11-495B16 from 2, comple... 40 5.0
47gb|AC073606.19| Homo sapiens 12 BAC RP11-390N6 (Roswell Park Can... 40 5.0
48gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31... 40 5.0
49gb|AC091272.12| Mus musculus chromosome 1, clone RP23-74B7, comp... 40 5.0
50emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 ... 40 5.0
51gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 5.0
52emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chr... 40 5.0
53emb|X02497.1|DMCHORSG D.melanogaster chorion genes s18-1, s15-1 ... 40 5.0
54emb|X06257.1|DMS18S15 Drosophila chorion genes s18-1 and s15-1 40 5.0
55emb|AL606926.6| Mouse DNA sequence from clone RP23-231M4 on chro... 40 5.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  153 bits (77), Expect = 5e-34
 Identities = 155/181 (85%)
 Strand = Plus / Plus

                                                                           
Query: 191     ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 250
               ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 1633178 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 1633237

                                                                           
Query: 251     ggatcataacactctgcaacacagcatagcttatgtttgttccaggcttggttactttct 310
               | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 1633238 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 1633297

                                                                           
Query: 311     ggtgcacctcgtctactacccagtcagcccctttgtctcccttcgccgtaagatagatgg 370
               |||||||||| ||||||||||| ||| |||| ||||||||||| |  ||||| |||||||
Sbjct: 1633298 ggtgcacctcatctactacccaatcaccccccttgtctccctttggagtaaggtagatgg 1633357

                
Query: 371     g 371
               |
Sbjct: 1633358 g 1633358
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>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score =  153 bits (77), Expect = 5e-34
 Identities = 155/181 (85%)
 Strand = Plus / Plus

                                                                         
Query: 191   ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 250
             ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 40624 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 40683

                                                                         
Query: 251   ggatcataacactctgcaacacagcatagcttatgtttgttccaggcttggttactttct 310
             | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 40684 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 40743

                                                                         
Query: 311   ggtgcacctcgtctactacccagtcagcccctttgtctcccttcgccgtaagatagatgg 370
             |||||||||| ||||||||||| ||| |||| ||||||||||| |  ||||| |||||||
Sbjct: 40744 ggtgcacctcatctactacccaatcaccccccttgtctccctttggagtaaggtagatgg 40803

              
Query: 371   g 371
             |
Sbjct: 40804 g 40804
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>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
              complete sequence
          Length = 127098

 Score =  153 bits (77), Expect = 5e-34
 Identities = 155/181 (85%)
 Strand = Plus / Plus

                                                                          
Query: 191    ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 250
              ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 112739 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 112798

                                                                          
Query: 251    ggatcataacactctgcaacacagcatagcttatgtttgttccaggcttggttactttct 310
              | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 112799 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 112858

                                                                          
Query: 311    ggtgcacctcgtctactacccagtcagcccctttgtctcccttcgccgtaagatagatgg 370
              |||||||||| ||||||||||| ||| |||| ||||||||||| |  ||||| |||||||
Sbjct: 112859 ggtgcacctcatctactacccaatcaccccccttgtctccctttggagtaaggtagatgg 112918

               
Query: 371    g 371
              |
Sbjct: 112919 g 112919
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  153 bits (77), Expect = 5e-34
 Identities = 155/181 (85%)
 Strand = Plus / Plus

                                                                           
Query: 191     ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 250
               ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 1633176 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 1633235

                                                                           
Query: 251     ggatcataacactctgcaacacagcatagcttatgtttgttccaggcttggttactttct 310
               | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 1633236 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 1633295

                                                                           
Query: 311     ggtgcacctcgtctactacccagtcagcccctttgtctcccttcgccgtaagatagatgg 370
               |||||||||| ||||||||||| ||| |||| ||||||||||| |  ||||| |||||||
Sbjct: 1633296 ggtgcacctcatctactacccaatcaccccccttgtctccctttggagtaaggtagatgg 1633355

                
Query: 371     g 371
               |
Sbjct: 1633356 g 1633356
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>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score =  153 bits (77), Expect = 5e-34
 Identities = 155/181 (85%)
 Strand = Plus / Plus

                                                                         
Query: 191   ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 250
             ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 45641 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 45700

                                                                         
Query: 251   ggatcataacactctgcaacacagcatagcttatgtttgttccaggcttggttactttct 310
             | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 45701 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 45760

                                                                         
Query: 311   ggtgcacctcgtctactacccagtcagcccctttgtctcccttcgccgtaagatagatgg 370
             |||||||||| ||||||||||| ||| |||| ||||||||||| |  ||||| |||||||
Sbjct: 45761 ggtgcacctcatctactacccaatcaccccccttgtctccctttggagtaaggtagatgg 45820

              
Query: 371   g 371
             |
Sbjct: 45821 g 45821
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>gb|AY110419.1| Zea mays CL19897_1 mRNA sequence
          Length = 712

 Score =  125 bits (63), Expect = 1e-25
 Identities = 150/179 (83%)
 Strand = Plus / Plus

                                                                       
Query: 193 catatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatatgg 252
           ||||| |||||||| || | ||||||||| ||||||||||| || || || |||||||| 
Sbjct: 271 catatcagggtgagttgcagctttgggcgatgaggctgaggttcaacaacctccatatga 330

                                                                       
Query: 253 atcataacactctgcaacacagcatagcttatgtttgttccaggcttggttactttctgg 312
           ||| | ||| |||| |  | ||||||||| ||||||||||| |||||||||||| |||||
Sbjct: 331 atcctgacagtctggaggatagcatagctgatgtttgttccgggcttggttactctctgg 390

                                                                      
Query: 313 tgcacctcgtctactacccagtcagcccctttgtctcccttcgccgtaagatagatggg 371
           ||||||||||| || ||||| ||| | |||||||| |||||||  ||||| ||||||||
Sbjct: 391 tgcacctcgtcaacaacccaatcaccgcctttgtcgcccttcggagtaaggtagatggg 449
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>ref|XM_493810.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2727

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                        
Query: 244  tccatatggatcataacactctgcaacacagcatagcttatgtttgttccaggcttggtt 303
            |||||||| ||||||||  ||||||  ||||| || || | |||||| || |||||||||
Sbjct: 2642 tccatatgaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggtt 2583

                                                                        
Query: 304  actttctggtgcacctcgtctactacccagtcagcccctttgtctcccttcgccgtaaga 363
            ||| ||||||||||||| ||||||||||| ||| |||| ||||||||||| |  ||||| 
Sbjct: 2582 actctctggtgcacctcatctactacccaatcaccccccttgtctccctttggagtaagg 2523

                    
Query: 364  tagatggg 371
            ||||||||
Sbjct: 2522 tagatggg 2515
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>gb|AC078923.12| Homo sapiens 12 BAC RP11-699I16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 152805

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 100   atttgttgaattgaagaatggac 122
             |||||||||||||||||||||||
Sbjct: 25994 atttgttgaattgaagaatggac 25972
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>gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, complete sequence
          Length = 175034

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    gatttttacacagctctgtaaagag 59
             |||||| ||||||||||||||||||
Sbjct: 31817 gattttgacacagctctgtaaagag 31793
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>gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, complete sequence
          Length = 181148

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     gatttttacacagctctgtaaagag 59
              |||||| ||||||||||||||||||
Sbjct: 164930 gattttgacacagctctgtaaagag 164906
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>gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, complete sequence
          Length = 188603

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 35    gatttttacacagctctgtaaagag 59
             |||||| ||||||||||||||||||
Sbjct: 33015 gattttgacacagctctgtaaagag 33039
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>gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, complete sequence
          Length = 165128

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     gatttttacacagctctgtaaagag 59
              |||||| ||||||||||||||||||
Sbjct: 127317 gattttgacacagctctgtaaagag 127293
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>gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, complete sequence
          Length = 212954

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     gatttttacacagctctgtaaagag 59
              |||||| ||||||||||||||||||
Sbjct: 197282 gattttgacacagctctgtaaagag 197258
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>gb|AC018898.17| Homo sapiens 3 BAC RP11-178K17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170606

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   ttccaggcttggttactttct 310
             |||||||||||||||||||||
Sbjct: 36496 ttccaggcttggttactttct 36516
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>gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chromosome y, complete
             sequence
          Length = 200911

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 35    gatttttacacagctctgtaaagag 59
             |||||| ||||||||||||||||||
Sbjct: 15679 gattttgacacagctctgtaaagag 15703
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 35       gatttttacacagctctgtaaagag 59
                |||||| ||||||||||||||||||
Sbjct: 12550894 gattttgacacagctctgtaaagag 12550870



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 35       gatttttacacagctctgtaaagag 59
                |||||| ||||||||||||||||||
Sbjct: 11863891 gattttgacacagctctgtaaagag 11863915



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 35      gatttttacacagctctgtaaagag 59
               |||||| ||||||||||||||||||
Sbjct: 2357302 gattttgacacagctctgtaaagag 2357278



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 35      gatttttacacagctctgtaaagag 59
               |||||| ||||||||||||||||||
Sbjct: 1691987 gattttgacacagctctgtaaagag 1692011
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>gb|AC117521.2| Homo sapiens chromosome 5 clone RP11-1015H3, complete sequence
          Length = 171405

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    aaaatttgttgaattgaagaa 117
             |||||||||||||||||||||
Sbjct: 81595 aaaatttgttgaattgaagaa 81615
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>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence
          Length = 151712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 98    aaatttgttgaattgaagaat 118
             |||||||||||||||||||||
Sbjct: 45611 aaatttgttgaattgaagaat 45631
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>ref|XM_938750.1| PREDICTED: Homo sapiens KIAA0825 protein (KIAA0825), mRNA
          Length = 1863

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  aaaatttgttgaattgaagaa 117
           |||||||||||||||||||||
Sbjct: 9   aaaatttgttgaattgaagaa 29
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>ref|XM_371761.3| PREDICTED: Homo sapiens similar to KIAA0825 protein (LOC642488),
           mRNA
          Length = 1863

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  aaaatttgttgaattgaagaa 117
           |||||||||||||||||||||
Sbjct: 9   aaaatttgttgaattgaagaa 29
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>gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromosome y, complete
             sequence
          Length = 212330

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    gatttttacacagctctgtaaagag 59
             |||||| ||||||||||||||||||
Sbjct: 72321 gattttgacacagctctgtaaagag 72297
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>gb|AC010448.7| Homo sapiens chromosome 5 clone CTD-2237D2, complete sequence
          Length = 140090

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     aaaatttgttgaattgaagaa 117
              |||||||||||||||||||||
Sbjct: 110562 aaaatttgttgaattgaagaa 110542
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>gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromosome y, complete
              sequence
          Length = 176384

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     gatttttacacagctctgtaaagag 59
              |||||| ||||||||||||||||||
Sbjct: 138547 gattttgacacagctctgtaaagag 138523
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>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence
          Length = 200622

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 98     aaatttgttgaattgaagaat 118
              |||||||||||||||||||||
Sbjct: 189054 aaatttgttgaattgaagaat 189034
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>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence
          Length = 170376

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 98     aaatttgttgaattgaagaat 118
              |||||||||||||||||||||
Sbjct: 127196 aaatttgttgaattgaagaat 127176
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 22      gcatcaataaagagatttttacaca 46
               |||||||| ||||||||||||||||
Sbjct: 3175824 gcatcaatcaagagatttttacaca 3175800
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>gb|AC010283.5|AC010283 Homo sapiens chromosome 5 clone CTC-555J2, complete sequence
          Length = 157896

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     aaaatttgttgaattgaagaa 117
              |||||||||||||||||||||
Sbjct: 131151 aaaatttgttgaattgaagaa 131131
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>emb|AL928736.5| Zebrafish DNA sequence from clone CH211-202D20, complete sequence
          Length = 186742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    atcataaaatcaccaaaattt 103
             |||||||||||||||||||||
Sbjct: 70944 atcataaaatcaccaaaattt 70964
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>gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chromosome y, complete
              sequence
          Length = 201209

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 35     gatttttacacagctctgtaaagag 59
              |||||| ||||||||||||||||||
Sbjct: 142539 gattttgacacagctctgtaaagag 142563
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>gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chromosome y, complete
            sequence
          Length = 196073

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 35   gatttttacacagctctgtaaagag 59
            |||||| ||||||||||||||||||
Sbjct: 8644 gattttgacacagctctgtaaagag 8620
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>gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, complete sequence
          Length = 201027

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gaggaattccaggctgattt 76
             ||||||||||||||||||||
Sbjct: 81475 gaggaattccaggctgattt 81494
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>ref|XM_632452.1| Dictyostelium discoideum hypothetical protein (DDB0187019), partial
            mRNA
          Length = 2169

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aatatcataaaatcaccaaa 99
            ||||||||||||||||||||
Sbjct: 2083 aatatcataaaatcaccaaa 2102
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>gb|BC100406.1| Mus musculus similar to Hypothetical protein DJ1198H6.2, mRNA (cDNA
            clone MGC:118154 IMAGE:30727972), complete cds
          Length = 2090

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  cagtcagcccctttgtctcc 350
            ||||||||||||||||||||
Sbjct: 1613 cagtcagcccctttgtctcc 1594
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>ref|NM_001034101.1| Mus musculus similar to Hypothetical protein DJ1198H6.2 (MGC118154),
            mRNA
          Length = 2090

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  cagtcagcccctttgtctcc 350
            ||||||||||||||||||||
Sbjct: 1613 cagtcagcccctttgtctcc 1594
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>ref|XM_891538.2| PREDICTED: Mus musculus similar to PRAME family member DJ1198H6.2
            (LOC626922), mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  cagtcagcccctttgtctcc 350
            ||||||||||||||||||||
Sbjct: 1610 cagtcagcccctttgtctcc 1591
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>ref|XM_285846.6| PREDICTED: Mus musculus similar to PRAME family member DJ1198H6.2
            (LOC329984), mRNA
          Length = 2052

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  cagtcagcccctttgtctcc 350
            ||||||||||||||||||||
Sbjct: 1588 cagtcagcccctttgtctcc 1569
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>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5,
             complete sequence
          Length = 230648

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    atcaataaagagatttttacacag 47
             ||||||||||||||||||| ||||
Sbjct: 97831 atcaataaagagatttttaaacag 97854



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    atcaataaagagatttttacacag 47
             ||||||||||||||||||| ||||
Sbjct: 89438 atcaataaagagatttttaaacag 89461
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>gb|AF545855.1| Rattus norvegicus cryptochrome 1 mRNA, complete cds
          Length = 2495

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 335  cagcccctttgtctcccttc 354
            ||||||||||||||||||||
Sbjct: 2415 cagcccctttgtctcccttc 2434
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>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
             ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
             gene for a novel immunoglobulin domain containing protein
             and two CpG islands, complete sequence
          Length = 219893

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    tttttagcatcaataaagag 35
             ||||||||||||||||||||
Sbjct: 41615 tttttagcatcaataaagag 41634
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>gb|AC087865.8| Homo sapiens 12 BAC RP11-66D24 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 169045

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 100  atttgttgaattgaagaatggaccctgg 127
            |||||||||||| ||||||| |||||||
Sbjct: 8108 atttgttgaattaaagaatgaaccctgg 8135
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>emb|BX640523.14| Zebrafish DNA sequence from clone CH211-271E10 in linkage group 5,
            complete sequence
          Length = 107704

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   atcaataaagagatttttacacag 47
            ||||||||||||||||||| ||||
Sbjct: 9805 atcaataaagagatttttaaacag 9828
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>gb|AC010020.7| Drosophila melanogaster 3L BAC RP98-26I3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166857

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     ccaaaatttgttgaattgaa 114
              ||||||||||||||||||||
Sbjct: 104966 ccaaaatttgttgaattgaa 104985
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>gb|AC091516.8| Homo sapiens 12q BAC RP11-474L23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158998

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 100    atttgttgaattgaagaatggaccctgg 127
              |||||||||||| ||||||| |||||||
Sbjct: 133862 atttgttgaattaaagaatgaaccctgg 133835
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>emb|AL928630.15| Mouse DNA sequence from clone RP23-33P17 on chromosome 4, complete
             sequence
          Length = 202295

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   cagtcagcccctttgtctcc 350
             ||||||||||||||||||||
Sbjct: 29085 cagtcagcccctttgtctcc 29104



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   cagtcagcccctttgtctcc 350
             ||||||||||||||||||||
Sbjct: 13149 cagtcagcccctttgtctcc 13168
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>emb|BX005061.9| Zebrafish DNA sequence from clone CH211-158F5 in linkage group 5,
              complete sequence
          Length = 155854

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 161    taatgttacaattcatttgtacatttgt 188
              ||||||||||||| ||||||| ||||||
Sbjct: 129773 taatgttacaatttatttgtagatttgt 129746
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>gb|AC109638.2| Homo sapiens BAC clone RP11-495B16 from 2, complete sequence
          Length = 104787

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   aaaaagggtgaatgcactaa 163
             ||||||||||||||||||||
Sbjct: 58737 aaaaagggtgaatgcactaa 58756
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>gb|AC073606.19| Homo sapiens 12 BAC RP11-390N6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 145430

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    catcaataaagagattttta 42
             ||||||||||||||||||||
Sbjct: 71775 catcaataaagagattttta 71794
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>gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31 of 83 of the complete
              sequence
          Length = 285158

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ccaaaatttgttgaattgaa 114
              ||||||||||||||||||||
Sbjct: 111085 ccaaaatttgttgaattgaa 111066
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>gb|AC091272.12| Mus musculus chromosome 1, clone RP23-74B7, complete sequence
          Length = 252476

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     tttacacagctctgtaaaga 58
              ||||||||||||||||||||
Sbjct: 170906 tttacacagctctgtaaaga 170925
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>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5,
              complete sequence
          Length = 168421

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     atcaataaagagatttttacacag 47
              ||||||||||||||||||| ||||
Sbjct: 154924 atcaataaagagatttttaaacag 154901



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     atcaataaagagatttttacacag 47
              ||||||||||||||||||| ||||
Sbjct: 139586 atcaataaagagatttttaaacag 139563
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      aaaatttgttgaattgaaga 116
               ||||||||||||||||||||
Sbjct: 1814260 aaaatttgttgaattgaaga 1814241
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>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete
            sequence
          Length = 185594

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  cagtcagcccctttgtctcc 350
            ||||||||||||||||||||
Sbjct: 9088 cagtcagcccctttgtctcc 9069
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>emb|X02497.1|DMCHORSG D.melanogaster chorion genes s18-1, s15-1 and s19-1
          Length = 4797

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   ccaaaatttgttgaattgaa 114
            ||||||||||||||||||||
Sbjct: 1934 ccaaaatttgttgaattgaa 1915
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>emb|X06257.1|DMS18S15 Drosophila chorion genes s18-1 and s15-1
          Length = 3850

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   ccaaaatttgttgaattgaa 114
            ||||||||||||||||||||
Sbjct: 2793 ccaaaatttgttgaattgaa 2774
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>emb|AL606926.6| Mouse DNA sequence from clone RP23-231M4 on chromosome 4, complete
             sequence
          Length = 93508

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   cagtcagcccctttgtctcc 350
             ||||||||||||||||||||
Sbjct: 40640 cagtcagcccctttgtctcc 40621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,671,335
Number of Sequences: 3902068
Number of extensions: 4671335
Number of successful extensions: 99237
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99030
Number of HSP's gapped (non-prelim): 207
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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