>gb|AY103997.1| Zea mays PCO088536 mRNA sequence
          Length = 1019

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 401 accatacgagttagggcttggacaacttcggacattggtggcctgaatt 449
           ||||| ||||||| | ||||||||||||| |||||||||||||||||||
Sbjct: 503 accatgcgagttaagtcttggacaacttcagacattggtggcctgaatt 455

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 412      tagggcttggacaacttcggacattggtggcctgaatt 449
                |||| ||||||||||||| |||||||||||||||||||
Sbjct: 26848969 taggtcttggacaacttcagacattggtggcctgaatt 26848932

>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0051O02
          Length = 169532

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 412    tagggcttggacaacttcggacattggtggcctgaatt 449
              |||| ||||||||||||| |||||||||||||||||||
Sbjct: 103595 taggtcttggacaacttcagacattggtggcctgaatt 103558

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                            
Query: 374      tacatggaagcctttgccgcgtcgctgaccatacgagttagggcttggacaacttcggac 433
                ||||||||||||||||  || || || ||||| |||||||   ||||||||||||| |||
Sbjct: 22618457 tacatggaagcctttgttgcatcactcaccatgcgagttaaatcttggacaacttcagac 22618516

                    
Query: 434      attg 437
                ||||
Sbjct: 22618517 attg 22618520

>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1773_H01
          Length = 146543

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 374   tacatggaagcctttgccgcgtcgctgaccatacgagttagggcttggacaacttcggac 433
             ||||||||||||||||  || || || ||||| |||||||   ||||||||||||| |||
Sbjct: 36355 tacatggaagcctttgttgcatcactcaccatgcgagttaaatcttggacaacttcagac 36414

                 
Query: 434   attg 437
             ||||
Sbjct: 36415 attg 36418

>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_E08
          Length = 119926

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 374   tacatggaagcctttgccgcgtcgctgaccatacgagttagggcttggacaacttcggac 433
             ||||||||||||||||  || || || ||||| |||||||   ||||||||||||| |||
Sbjct: 98839 tacatggaagcctttgttgcatcactcaccatgcgagttaaatcttggacaacttcagac 98898

                 
Query: 434   attg 437
             ||||
Sbjct: 98899 attg 98902

>gb|AC133496.3| Mus musculus BAC clone RP24-386G2 from chromosome 13, complete sequence
          Length = 173924

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    atcaaggacaaacagcttcta 144
              |||||||||||||||||||||
Sbjct: 100022 atcaaggacaaacagcttcta 100042

>gb|AC131659.2| Mus musculus BAC clone RP23-241H7 from 3, complete sequence
          Length = 171521

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 353    tcctcatctcaggaaggcacttaca 377
              |||||||||||||||||| ||||||
Sbjct: 126155 tcctcatctcaggaaggcccttaca 126179

>emb|CR391919.5| Zebrafish DNA sequence from clone DKEY-174K18 in linkage group 1,
              complete sequence
          Length = 179764

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     aaataatatggcaaaataaaaatca 59
              |||||||||||||||| ||||||||
Sbjct: 162368 aaataatatggcaaaaaaaaaatca 162344

>gb|AC171207.2| Mus musculus BAC clone RP23-339A3 from chromosome 3, complete sequence
          Length = 190395

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 353   tcctcatctcaggaaggcacttaca 377
             |||||||||||||||||| ||||||
Sbjct: 93977 tcctcatctcaggaaggcccttaca 94001

>gb|AC163659.4| Mus musculus BAC clone RP24-294C10 from chromosome 1, complete sequence
          Length = 75142

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   ctttgcaagtaagcaaatat 262
             ||||||||||||||||||||
Sbjct: 42930 ctttgcaagtaagcaaatat 42949

>gb|AC147025.2| Pan troglodytes BAC clone RP43-92C7 from 7, complete sequence
          Length = 142948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    actaaataatatggcaaaat 51
             ||||||||||||||||||||
Sbjct: 43800 actaaataatatggcaaaat 43819

>gb|AC118012.9| Mus musculus chromosome 8, clone RP23-454D11, complete sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    aaaatgaaatgcagacctct 168
              ||||||||||||||||||||
Sbjct: 130077 aaaatgaaatgcagacctct 130058

>gb|AC108097.3| Homo sapiens chromosome 16 clone RP11-109P11, complete sequence
          Length = 181387

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   agtctaagggcctatcaagg 130
             ||||||||||||||||||||
Sbjct: 64710 agtctaagggcctatcaagg 64691

>gb|AC004885.2| Homo sapiens PAC clone RP4-781A18 from 7, complete sequence
          Length = 190842

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    actaaataatatggcaaaat 51
             ||||||||||||||||||||
Sbjct: 59234 actaaataatatggcaaaat 59253

>gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete sequence
          Length = 35348

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    agactaaataatatggcaaaataa 53
             |||||||||||||||| |||||||
Sbjct: 16664 agactaaataatatggtaaaataa 16641

>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     aaaataaaaatcagataggt 66
              ||||||||||||||||||||
Sbjct: 172503 aaaataaaaatcagataggt 172522

>emb|CR392340.11| Zebrafish DNA sequence from clone DKEY-23G12 in linkage group 20,
              complete sequence
          Length = 247887

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    caaacagcttctacaggaaa 151
              ||||||||||||||||||||
Sbjct: 177471 caaacagcttctacaggaaa 177490

>gb|AC114294.2| Homo sapiens chromosome 5 clone RP11-114J22, complete sequence
          Length = 69490

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ataatatggcaaaataaaaa 56
             ||||||||||||||||||||
Sbjct: 45541 ataatatggcaaaataaaaa 45560

>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence
          Length = 163772

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   cctatcaaggacaaacagct 140
             ||||||||||||||||||||
Sbjct: 36898 cctatcaaggacaaacagct 36917

>emb|BX649436.12| Zebrafish DNA sequence from clone DKEYP-50F7 in linkage group 20,
            complete sequence
          Length = 99233

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  caaacagcttctacaggaaa 151
            ||||||||||||||||||||
Sbjct: 5554 caaacagcttctacaggaaa 5573

>dbj|AP003395.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-305N23, complete
              sequences
          Length = 205596

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    cagttgaattcaaccaacct 213
              ||||||||||||||||||||
Sbjct: 174916 cagttgaattcaaccaacct 174897

>dbj|AP003393.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-196E1, complete
             sequences
          Length = 174303

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   cagttgaattcaaccaacct 213
             ||||||||||||||||||||
Sbjct: 54164 cagttgaattcaaccaacct 54145

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 37      ataatatggcaaaataaaaatcag 60
               ||||||| ||||||||||||||||
Sbjct: 4385352 ataatattgcaaaataaaaatcag 4385329

>emb|BX465849.10| Zebrafish DNA sequence from clone DKEY-263L8 in linkage group 1,
             complete sequence
          Length = 136195

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aaataatatggcaaaataaa 54
             ||||||||||||||||||||
Sbjct: 14302 aaataatatggcaaaataaa 14321

>emb|AL163171.4|CNS01RIF Human chromosome 14 DNA sequence BAC R-406A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148578

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    gcaaaataaaaatcagatag 64
             ||||||||||||||||||||
Sbjct: 92450 gcaaaataaaaatcagatag 92469

>emb|AL355095.4|CNS05TCE Human chromosome 14 DNA sequence BAC R-11K13 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 153099

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   gcaaaataaaaatcagatag 64
            ||||||||||||||||||||
Sbjct: 9959 gcaaaataaaaatcagatag 9978

>emb|AL445385.4|CNS07ED1 Human chromosome 14 DNA sequence BAC R-126I9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163784

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 30     agactaaataatatggcaaaataaaaat 57
              ||||||||||||||  ||||||||||||
Sbjct: 110159 agactaaataatatcacaaaataaaaat 110186


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,342,670
Number of Sequences: 3902068
Number of extensions: 4342670
Number of successful extensions: 78895
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78761
Number of HSP's gapped (non-prelim): 134
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)