Clone Name | rbastl18e12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 ttttcctttgcttattgttaagaga 135 ||||||||||||||||||| ||||| Sbjct: 69981 ttttcctttgcttattgttgagaga 70005
>emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chromosome X, complete sequence Length = 206856 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 cttttcctttgcttattgtta 130 ||||||||||||||||||||| Sbjct: 47723 cttttcctttgcttattgtta 47703
>gb|AC155298.2| Mus musculus BAC clone RP24-245L7 from chromosome 13, complete sequence Length = 178609 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tacaaagccatatatacaaa 312 |||||||||||||||||||| Sbjct: 14017 tacaaagccatatatacaaa 14036
>gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, complete sequence Length = 189126 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcggccggcaccctggcagg 105 |||||||||||||||||||| Sbjct: 131423 tcggccggcaccctggcagg 131442
>gb|AC135800.24| Medicago truncatula clone mth2-14g8, complete sequence Length = 125467 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ttttcctttgcttattgtta 130 |||||||||||||||||||| Sbjct: 80775 ttttcctttgcttattgtta 80794
>emb|BX324166.8| Zebrafish DNA sequence from clone DKEY-66A8 in linkage group 6, complete sequence Length = 215450 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ttttcctttgcttattgtta 130 |||||||||||||||||||| Sbjct: 162735 ttttcctttgcttattgtta 162716
>gb|AC157757.24| Medicago truncatula clone mth2-16j22, complete sequence Length = 139728 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ttttcctttgcttattgtta 130 |||||||||||||||||||| Sbjct: 58881 ttttcctttgcttattgtta 58862
>gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome 13, complete sequence Length = 204262 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ctcaaagagctcaagatttt 155 |||||||||||||||||||| Sbjct: 163526 ctcaaagagctcaagatttt 163507
>dbj|AK048614.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130087L13 product:unclassifiable, full insert sequence Length = 2682 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ctcaaagagctcaagatttt 155 |||||||||||||||||||| Sbjct: 1629 ctcaaagagctcaagatttt 1648
>emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-898B23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201794 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cttttcctttgcttattgtt 129 |||||||||||||||||||| Sbjct: 142657 cttttcctttgcttattgtt 142638
>gb|AF212491.1| Gibberella zeae strain NRRL 28721 phosphate permease gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 atctatctaactgacttcac 231 |||||||||||||||||||| Sbjct: 377 atctatctaactgacttcac 396
>gb|AF212490.1| Gibberella zeae strain NRRL 28720 phosphate permease gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 atctatctaactgacttcac 231 |||||||||||||||||||| Sbjct: 377 atctatctaactgacttcac 396
>gb|AF212487.1| Gibberella zeae strain NRRL 6101 phosphate permease gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 atctatctaactgacttcac 231 |||||||||||||||||||| Sbjct: 377 atctatctaactgacttcac 396
>emb|AL935178.12| Zebrafish DNA sequence from clone CH211-180B9 in linkage group 22, complete sequence Length = 144027 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tacaaagccatatatacaaa 312 |||||||||||||||||||| Sbjct: 28723 tacaaagccatatatacaaa 28704
>emb|CT009733.13| Mouse DNA sequence from clone RP23-157D19 on chromosome 13, complete sequence Length = 192464 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ctcaaagagctcaagatttt 155 |||||||||||||||||||| Sbjct: 59962 ctcaaagagctcaagatttt 59943 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,567,309 Number of Sequences: 3902068 Number of extensions: 2567309 Number of successful extensions: 48986 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48953 Number of HSP's gapped (non-prelim): 33 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)