>ref|XM_740754.1| Plasmodium chabaudi chabaudi carbamoyl phosphate synthetase
            (PC000179.01.0) partial mRNA
          Length = 6318

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 3    ctttaatcaacaaatttcccaacaa 27
            |||||||||| ||||||||||||||
Sbjct: 3561 ctttaatcaagaaatttcccaacaa 3585

>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 55    tgcgaaagcatattccaacaa 75
             |||||||||||||||||||||
Sbjct: 55392 tgcgaaagcatattccaacaa 55412

>gb|U97593.1| Caenorhabditis elegans cosmid C46G7, complete sequence
          Length = 43585

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    aacaaatttcccaacaaaata 31
             |||||||||||||||||||||
Sbjct: 35984 aacaaatttcccaacaaaata 36004

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 55       tgcgaaagcatattccaacaa 75
                |||||||||||||||||||||
Sbjct: 20952160 tgcgaaagcatattccaacaa 20952180

>emb|CR847514.13| Zebrafish DNA sequence from clone DKEYP-11D6 in linkage group 3, complete
              sequence
          Length = 165569

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     acaggcgatacatcaaaatca 97
              |||||||||||||||||||||
Sbjct: 108976 acaggcgatacatcaaaatca 108956

>gb|AC161444.4| Mus musculus chromosome 1, clone RP23-446D9, complete sequence
          Length = 182353

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     acaaaataaaatgctgtaca 43
              ||||||||||||||||||||
Sbjct: 173742 acaaaataaaatgctgtaca 173761

>gb|AC146459.3| Pan troglodytes BAC clone CH251-229E22 from Y, complete sequence
          Length = 191428

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    aacaaatttcccaacaaaataaaa 34
             |||||| |||||||||||||||||
Sbjct: 60379 aacaaaattcccaacaaaataaaa 60402

>gb|AC147477.1| Pan troglodytes BAC clone CH251-483E9 from Y, complete sequence
          Length = 213500

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     aacaaatttcccaacaaaataaaa 34
              |||||| |||||||||||||||||
Sbjct: 207843 aacaaaattcccaacaaaataaaa 207866

>gb|AC124763.4| Mus musculus BAC clone RP23-158P17 from 12, complete sequence
          Length = 208489

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   aattccaattggccagtatt 124
             ||||||||||||||||||||
Sbjct: 67319 aattccaattggccagtatt 67338

>dbj|BS000617.1| Pan troglodytes chromosome Y clone:PTB-206A19, complete sequences
          Length = 169081

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     aacaaatttcccaacaaaataaaa 34
              |||||| |||||||||||||||||
Sbjct: 122338 aacaaaattcccaacaaaataaaa 122315

>dbj|BS000555.1| Pan troglodytes chromosome Y clone:PTB-439G17, complete sequences
          Length = 160463

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     aacaaatttcccaacaaaataaaa 34
              |||||| |||||||||||||||||
Sbjct: 158727 aacaaaattcccaacaaaataaaa 158704

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 11       aacaaatttcccaacaaaataaaa 34
                |||||| |||||||||||||||||
Sbjct: 14964843 aacaaaattcccaacaaaataaaa 14964866

>gb|AC010048.5| Drosophila melanogaster 3L BAC RP98-5B23 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 175316

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tttaatcaacaaatttccca 23
             ||||||||||||||||||||
Sbjct: 86779 tttaatcaacaaatttccca 86760

>gb|AC008589.6| Homo sapiens chromosome 5 clone CTC-574I1, complete sequence
          Length = 121272

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   caacaaaataaaatgctgta 41
            ||||||||||||||||||||
Sbjct: 7482 caacaaaataaaatgctgta 7463

>gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, complete sequence
          Length = 165604

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    caacaaaataaaatgctgta 41
             ||||||||||||||||||||
Sbjct: 13530 caacaaaataaaatgctgta 13511

>gb|AC102488.11| Mus musculus chromosome 1, clone RP24-496O18, complete sequence
          Length = 127076

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     acaaaataaaatgctgtaca 43
              ||||||||||||||||||||
Sbjct: 112743 acaaaataaaatgctgtaca 112724

>gb|AC008779.5|AC008779 Homo sapiens chromosome 5 clone CTD-2023H18, complete sequence
          Length = 123275

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    caacaaaataaaatgctgta 41
             ||||||||||||||||||||
Sbjct: 49453 caacaaaataaaatgctgta 49434

>gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complete sequence
          Length = 174622

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   aacaaaattgaggcatgggg 163
             ||||||||||||||||||||
Sbjct: 55311 aacaaaattgaggcatgggg 55330

>gb|AC009494.2|AC009494 Homo sapiens BAC clone RP11-450B24 from Y, complete sequence
          Length = 188314

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     aacaaatttcccaacaaaataaaa 34
              |||||| |||||||||||||||||
Sbjct: 102679 aacaaaattcccaacaaaataaaa 102656

>gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50 of 83 of the complete
              sequence
          Length = 278708

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tttaatcaacaaatttccca 23
              ||||||||||||||||||||
Sbjct: 251673 tttaatcaacaaatttccca 251654

>gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome 12, complete sequence
          Length = 211561

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   aattccaattggccagtatt 124
             ||||||||||||||||||||
Sbjct: 35272 aattccaattggccagtatt 35253

>dbj|AP001085.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-632K5, complete
            sequence
          Length = 175747

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   aaataaaatgctgtacagtc 46
            ||||||||||||||||||||
Sbjct: 7689 aaataaaatgctgtacagtc 7708

>dbj|AP000577.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-51L7, complete
             sequence
          Length = 122381

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    aaataaaatgctgtacagtc 46
             ||||||||||||||||||||
Sbjct: 83287 aaataaaatgctgtacagtc 83306

>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence
          Length = 195371

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    atttcccaacaaaataaaat 35
             ||||||||||||||||||||
Sbjct: 70887 atttcccaacaaaataaaat 70906

>emb|AL928901.8| Zebrafish DNA sequence from clone CH211-155M12 in linkage group 5,
             complete sequence
          Length = 145957

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tgaagcaaatggtacaacaa 148
             ||||||||||||||||||||
Sbjct: 22996 tgaagcaaatggtacaacaa 23015


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,654,679
Number of Sequences: 3902068
Number of extensions: 2654679
Number of successful extensions: 212371
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 212166
Number of HSP's gapped (non-prelim): 205
length of query: 218
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 196
effective length of database: 17,147,199,772
effective search space: 3360851155312
effective search space used: 3360851155312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)