Clone Name | rbastl18e04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7 | 31 | 0.67 | 2 | AAER_ECOLI (P67662) HTH-type transcriptional activator aaeR | 27 | 9.7 | 3 | AAER_ECOL6 (P67663) HTH-type transcriptional activator aaeR | 27 | 9.7 | 4 | AAER_ECO57 (P67664) HTH-type transcriptional activator aaeR | 27 | 9.7 |
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>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 31.2 bits (69), Expect = 0.67 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = +1 Query: 148 PSAIPCSSTICPQLQSRFTSRLLSSLPGIGNDASTLLPKQTLDTSGSKSTLIKRPDESQQ 327 PS P S P + TS ++ ASTL P DT+GS S+ P S Sbjct: 374 PSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPSTANDTNGSSSSSSSNPRTSSP 433 Query: 328 ISS 336 ++S Sbjct: 434 LAS 436
>AAER_ECOLI (P67662) HTH-type transcriptional activator aaeR| Length = 309 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +1 Query: 157 IPCSSTICPQLQSRFTSRLLSSLPGIGNDASTLLPKQTLDTSG 285 I CSST+ + + T+++L PG+ + T +P L G Sbjct: 96 IGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADG 138
>AAER_ECOL6 (P67663) HTH-type transcriptional activator aaeR| Length = 309 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +1 Query: 157 IPCSSTICPQLQSRFTSRLLSSLPGIGNDASTLLPKQTLDTSG 285 I CSST+ + + T+++L PG+ + T +P L G Sbjct: 96 IGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADG 138
>AAER_ECO57 (P67664) HTH-type transcriptional activator aaeR| Length = 309 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +1 Query: 157 IPCSSTICPQLQSRFTSRLLSSLPGIGNDASTLLPKQTLDTSG 285 I CSST+ + + T+++L PG+ + T +P L G Sbjct: 96 IGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADG 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,012,402 Number of Sequences: 219361 Number of extensions: 710203 Number of successful extensions: 1938 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1929 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)